Annotation
- Annotation
- Identified tags
| ATGCTAGTCT count=871 | |
| L31609 | Trailer TTGTAC, Position 226 Mus musculus (clone mcori-1ck9) S29 ribosomal protein mRNA |
| AGTCTTTAAA count=350 | |
| M62952 | Trailer ATAAAA, Position 638 Mus musculus ribosomal protein L19 |
| TGCAACTGTT count=317 | |
| U11248 | Trailer AAATAA, Position 266 Mus musculus C57BL/6J ribosomal protein S28 mRNA |
| GAGAAGATGC count=308 | |
| X80699 | Trailer AGGAGT, Position 464 M.musculus L26 mRNA. |
| TGCGGTGACT count=264 | |
| X57961 | Trailer TGATGT, Position 662 M.musculus mRNA for ribosomal protein L7. |
| X60289 | Trailer TGATGT, Position 452 M.musculus mRNA for ribosomal protein S24. |
| GTGGATGGCA count=233 | |
| M11686 | Trailer GAGTGG, Position 1269 Mouse endo B cytokeratin mRNA |
| M36376 | Trailer GAGTGG, Position 1264 Mouse keratin D mRNA |
| GAGAGGGCAA count=218 | |
| X15962 | Trailer ACCACG, Position 339 Mouse mRNA for ribosomal protein S12. |
| TACAATGAAG count=211 | |
| M37761 | Trailer CTCTGA, Position 312 Mouse calcyclin mRNA |
| X66449 | Trailer CTCTGA, Position 405 M.musculus mRNA for calcyclin. |
| X52278 | Trailer CTCTGA, Position 321 Mouse 5B10 mRNA for calcyclin. |
| AATGCCCTCA count=192 | |
| U29402 | Trailer TTAAAG, Position 191 Mus musculus acidic ribosomal phosphoprotein P1 mRNA |
| ATCTTGTGAA count=171 | |
| M20632 | Trailer AACCCA, Position 1617 Mouse LLRep3 protein mRNA from a repetitive element |
| AF283559 | Trailer AACCCA, Position 811 Mus musculus ribosomal protein S2 mRNA |
| AGGCTACTAC count=169 | |
| X05021 | Trailer AAAGTT, Position 336 Murine mRNA with homology to yeast L29 ribosomal protein gene. |
| CTGACCACAT count=167 | |
| AF260271 | Trailer GAACAA, Position 637 Mus musculus 60S ribosomal Protein L9 mRNA |
| TGAAATGAAC count=148 | |
| AB037665 | Trailer CAGCCC, Position 319 Mus musculus rpl38 mRNA for ribosomal protein L38 |
| TTTGCCGGCA count=143 | |
| M81745 | Trailer AGCAGC, Position 123 Mouse 1400 base pair ubiquitin mRNA |
| X51703 | Trailer AGCAGC, Position 917 Mouse mRNA for ubiquitin. |
| TGACTCCCTC count=136 | |
| M11944 | Trailer TTCTGG, Position 69 Mouse serum induced RNA with partial B2 repeat and consensus of the |
| M30250 | Trailer TTCTGG, Position 518 Mouse RNA polymerase III-associated B2 repeat. |
| M11284 | Trailer TTCTGG, Position 1224 Mouse MHC class I Qa-Tla mRNA |
| L00606 | Trailer TTCTGG, Position 1217 Mus musculus MHC class I Qa-1a antigen mRNA |
| M31450 | Trailer TTCTGG, Position 4 Mouse B2 repetitive sequence mRNA |
| M31447 | Trailer TTCTGG, Position 45 Mouse B2 repetitive sequence mRNA |
| M31446 | Trailer TTCTGG, Position 66 Mouse B2 repetitive sequence mRNA |
| M31444 | Trailer TTCTGG, Position 70 Mouse B2 repetitive sequence mRNA |
| X83590 | Trailer AAAAAA, Position 325 M.musculus mRNA for ribosomal protein L5 |
| AJ223070 | Trailer CAAGTC, Position 2142 Mus musculus mRNA for TCF-4 protein. |
| GCATTGCCAA count=116 | |
| Y00225 | Trailer GGAGGA, Position 1192 Murine mRNA for J1 protein |
| CGGAAGAAGA count=115 | |
| M88335 | Trailer TGATGG, Position 468 M.musculus mRNA sequence. |
| ATTGTAGATG count=110 | |
| D29802 | Trailer AATTGA, Position 890 Mouse mRNA for G protein beta subunit homologue |
| X75313 | Trailer AATTGA, Position 896 M.musculus (C57BL/6) GB-like mRNA. |
| GGTGCCACCC count=109 | |
| M33330 | Trailer ACTCCT, Position 426 Mouse insulinoma (rig) mRNA |
| AGCAAGCAGG count=108 | |
| J04181 | Trailer AGTACG, Position 1130 Mouse A-X actin mRNA |
| M12481 | Trailer AGTACG, Position 990 Mouse cytoplasmic beta-actin mRNA. |
| X03765 | Trailer AGTACG, Position 990 Mouse mRNA for cytoplasmatic beta-actin (pAL 41; AA 27-375). |
| X03672 | Trailer AGTACG, Position 1148 Mouse cytoskeletal mRNA for beta-actin. |
| ATGTCTTCTC count=107 | |
| M28727 | Trailer CATGTT, Position 1144 Mouse alpha-tubulin gene M-alpha-2 |
| M13446 | Trailer CATGTT, Position 1520 Mouse alpha-tubulin isotype M-alpha-2 mRNA |
| GGAGACATTG count=101 | |
| U93864 | Trailer TCACAG, Position 371 Mus musculus ribosomal protein S11 mRNA |
| CGCAGGCGCA count=98 | |
| U28917 | Trailer AGGCCC, Position 116 Mus musculus 60S ribosomal protein (A52) mRNA |
| AAGTCGTGCT count=94 | |
| D26610 | Trailer TCTGGC, Position 171 Mouse mRNA for monoclonal nonspecific suppressor factor beta |
| X65922 | Trailer TCTGGC, Position 159 M.musculus fau mRNA. |
| AF147745 | Trailer TCTGGC, Position 225 Mus musculus monoclonal non-specific suppressor factor beta mRNA |
| CATCTGCATT count=90 | |
| X15267 | Trailer TGCGGC, Position 884 Mouse mRNA for acidic ribosomal phosophoprotein PO. |
| CCAGACTGGT count=90 | |
| M76763 | Trailer TCCTGA, Position 256 Mus musculus ribosomal protein (Ke-3) mRNA |
| TGCCGCAAGT count=90 | |
| AF118402 | Trailer GCTACG, Position 303 Mus musculus ubiquitin/60S ribosomal fusion protein mRNA |
| AAAGCCCGGA count=84 | |
| X73829 | Trailer AAGGCA, Position 609 M.musculus mRNA for ribosomal protein S8. |
| AGCCCTAATC count=82 | |
| M21836 | Trailer CTCTGG, Position 1640 Mouse extra-embryonic endodermal cytokeratin type II (EndoA) mRNA |
| M22831 | Trailer CTCTGG, Position 1587 Mouse keratin type II (EndoA) mRNA |
| CTGGGTACTG count=82 | |
| L04280 | Trailer CACAGT, Position 471 Mus musculus ribosomal protein (Rpl12) mRNA |
| TGTGCAGGGT count=82 | |
| M21495 | Trailer ATTAAC, Position 1513 Mouse cytoskeletal gamma-actin mRNA |
| X13055 | Trailer ATTAAC, Position 1455 Murine mRNA for cytoplasmic gamma-actin. |
| AF195094 | Trailer ATTAAC, Position 1571 Mus musculus gamma actin-like protein (Actl) mRNA |
| ACCATTTCCG count=80 | |
| X52803 | Trailer ACTGTG, Position 506 Mouse mRNA for cyclophilin (EC 5.2.1.8). |
| CGGGAGGTGT count=80 | |
| X75895 | Trailer GCGGCT, Position 149 M.musculus mRNA for ribosomal protein L36. |
| TTCGACACAG count=80 | |
| X81987 | Trailer AGAAGG, Position 717 M.musculus mRNA for TAX responsive element binding protein 107. |
| TTTACTTCTA count=80 | |
| X06406 | Trailer CAGAGA, Position 675 Mouse mRNA for translational controlled 40 kDa polyyeptide p40. |
| AF140348 | Trailer CAGAGA, Position 683 Mus musculus 37kDa oncofetal antigen mRNA |
| CCGACACCAA count=78 | |
| D25213 | Trailer GGAGAT, Position 306 Mouse rpS17 mRNA for ribosomal protein S17 |
| TGATGCCCTC count=78 | |
| M36402 | Trailer TTCTGG, Position 86 Mouse B2 repetitive sequence mRNA. |
| J03293 | Trailer TTCTGG, Position 2163 Mouse skeletal muscle phosphorylase kinase |
| D17630 | Trailer TTCTGG, Position 1782 Mouse mRNA for interleukin-8 receptor (IL-8R) |
| M31445 | Trailer TTCTGG, Position 66 Mouse B2 repetitive sequence mRNA |
| U34071 | Trailer TTCTGG, Position 2742 Mus musculus alpha-galactosidase A mRNA |
| U19119 | Trailer TTCTGA, Position 2042 Mus musculus G-protein-like LRG-47 mRNA |
| U16958 | Trailer TTCTGG, Position 1183 Mus musculus pre-T cell receptor alpha-type chain precursor mRNA |
| J05277 | Trailer CAGAAG, Position 4054 Mouse hexokinase mRNA |
| X06407 | Trailer CACCAT, Position 627 Mouse mRNA for 21 kd polypeptide under translational control. |
| TATACAGTCG count=75 | |
| M29016 | Trailer GGAAAC, Position 669 Mouse ribosomal protein L7 (rpL7) mRNA |
| TGCATATGGA count=71 | |
| M17516 | Trailer TGATGG, Position 818 Mouse lactate dehydrogenase A-4 (LDH-A) mRNA |
| U13687 | Trailer TGATGG, Position 1618 Mus musculus DBA/2J lactate dehydrogenase-A (LDH-A) mRNA |
| TCTCTTCCCA count=70 | |
| M73436 | Trailer GAGGAA, Position 711 Mouse ribosomal protein S4 (Rps4) mRNA |
| CTCCTTGTCA count=69 | |
| U43206 | Trailer AGTACA, Position 1141 Mus musculus phosphatidylethanolamine binding protein mRNA |
| AB046417 | Trailer AGTACA, Position 1144 Mus musculus HCNPpp mRNA for hippocampal cholinergic |
| TTGTTGTGAG count=67 | |
| L29441 | Trailer TGTGTG, Position 1944 Mus musculus mRNA |
| AF181684 | Trailer TGTGTG, Position 2147 Mus musculus membrane protein TMS-1 mRNA |
| CTGGTGTCCT count=66 | |
| U41341 | Trailer TGACCG, Position 151 Mus musculus endothelial monocyte-activating polypeptide I mRNA |
| GTCGTTCTGG count=66 | |
| M22432 | Trailer TAAGAA, Position 1197 Mus musculus protein synthesis elongation factor Tu (eEF-Tu |
| X13661 | Trailer TAAGAA, Position 1174 Mouse mRNA for elongation factor 1-alpha (EF 1-alpha). |
| AATGTGCGGA count=65 | |
| U93863 | Trailer TTGAGC, Position 300 Mus musculus ribosomal protein L21 mRNA |
| TAACACCCTC count=64 | |
| M12185 | Trailer TTCTGC, Position 1181 Mouse class I MHC H2-D-beta transplantation antigen mRNA (b |
| K00129 | Trailer TTCTGC, Position 1181 Mouse MHC class I H2-D gene (haplotype b) |
| U47327 | Trailer TTCTGC, Position 1496 Mus musculus MHC class I heavy chain precursor (H-2D(k)) mRNA |
| U47326 | Trailer TTCTGC, Position 1505 Mus musculus MHC class I heavy chain precursor (H-2D(d)) mRNA |
| U47325 | Trailer TTCTGC, Position 1495 Mus musculus MHC class I heavy chain precursor (H-2D(b)) mRNA |
| X00246 | Trailer TTCTGC, Position 1265 Mouse mRNA with a Set 1 repetitive element for a class I major |
| CCCTCCCACA count=63 | |
| M36829 | Trailer GAATAG, Position 2387 Mouse heat-shock protein hsp84 mRNA. |
| M18186 | Trailer GAATAG, Position 2397 Mouse 84 kD heat shock protein mRNA |
| AATGATGAGG count=62 | |
| M19141 | Trailer ACAAAC, Position 1748 Mouse heat shock protein 70 cognate mRNA |
| U27129 | Trailer ACAAAC, Position 1713 Mus musculus breast heat shock 73 protein (hsc73) mRNA |
| AGCTGAAGGT count=62 | |
| Z50159 | Trailer TCATGG, Position 205 M.musculus mRNA for Sui1. |
| AGTATAATAA count=62 | |
| AF283667 | Trailer AGGAGT, Position 1703 Mus musculus phosphoglycerate mutase 1 (Pgam1) mRNA |
| CCGCGAGGCC count=60 | |
| U67770 | Trailer CGGAAG, Position 265 Mus musculus ribosomal protein S26 (RPS26) mRNA |
| TGCGTATGGC count=60 | |
| X74856 | Trailer GGCCAT, Position 383 M.musculus L28 mRNA for ribosomal protein L28. |
| AATAAAGTGG count=57 | |
| M60456 | Trailer GTTTTT, Position 849 Mouse cyclophilin mRNA |
| X58990 | Trailer GTTTTT, Position 975 Mouse mCyP-S1 mRNA for cyclophilin CyP-S1. |
| AGAGAAGCAG count=57 | |
| M19381 | Trailer ATATTG, Position 561 Mouse calmodulin (Cam I) mRNA |
| X61432 | Trailer ATATTG, Position 401 M.musculus mRNA for calmodulin. |
| GCAGAACCAG count=57 | |
| L21027 | Trailer GGCATC, Position 1532 Mus musculus A10 mRNA |
| AACAATAAAC count=55 | |
| M33863 | Trailer CACAGC, Position 1382 Mouse 2'-5' oligo A synthetase mRNA |
| X04958 | Trailer CACAGC, Position 1382 Mouse mRNA for 2-5A synthetase (2'-5') oligoadenylate synthetase. |
| AAGTCCTTTG count=55 | |
| AF214527 | Trailer TGAAAG, Position 258 Mus musculus ribosomal protein L27 (RPL27) mRNA |
| GTGTACTTCA count=54 | |
| L32751 | Trailer TTGGGA, Position 777 Mouse (clone M1) GTPase (Ran) mRNA |
| AF159256 | Trailer TTGGGA, Position 752 Mus musculus Lps/Ran GTPase (lps(d)) mRNA |
| ACAGAGCTGG count=53 | |
| AF085809 | Trailer GAAGAT, Position 3408 Mus musculus synapsin Ib (SynI) mRNA |
| CAAGTGTTTA count=53 | |
| X13605 | Trailer ACCATA, Position 832 Murine mRNA for replacement variant histone H3.3. |
| TTCCATCCCT count=53 | |
| L06465 | Trailer TCTGCT, Position 475 Mus musculus cytochrome oxidase subunit VIa (liver-type isoform) |
| U08440 | Trailer TCTGCT, Position 465 Mus musculus Balb/c cytochrome c oxidase subunit VIaL mRNA |
| AGCGGTGGGA count=51 | |
| Y00348 | Trailer ATGACA, Position 184 Mouse mRNA for ribosomal protein S6. |
| AGGAGGGTCT count=49 | |
| D90151 | Trailer ATTTCC, Position 1299 Mouse mRNA for CArG-binding factor-A |
| GTGTGTTGTC count=49 | |
| U67771 | Trailer TGGAGG, Position 354 Mus musculus ribosomal protein L8 (RPL8) mRNA |
| TGACGCCCTC count=48 | |
| M36411 | Trailer TTCTGG, Position 1149 Mouse Mpv17 mRNA |
| U56773 | Trailer TTCTGG, Position 2438 Mus musculus pelle-like protein kinase mRNA |
| AF103876 | Trailer TTCTGG, Position 2698 Mus musculus pelle-like protein kinase mRNA |
| AGAACATTTG count=47 | |
| X14607 | Trailer TTCCAA, Position 325 Mouse SV-40 induced 24p3 mRNA. |
| CATTTAATTA count=47 | |
| AF263458 | Trailer GAGAAC, Position 515 Mus musculus onzin mRNA |
| AAGTTTAAAT count=46 | |
| X16053 | Trailer GACTGT, Position 392 Mouse mRNA for thymosin beta-4. |
| TGATGATGAG count=46 | |
| AF029844 | Trailer GAGGAA, Position 361 Mus musculus elongation factor 1-beta homolog mRNA |
| AGAATAATAA count=45 | |
| X01838 | Trailer ATATAA, Position 618 Mouse mRNA for beta2-microglobulin. |
| ACCACCAAGG count=44 | |
| X56135 | Trailer ACTTGA, Position 203 Mouse mRNA for prothymosin alpha. |
| ACCATCCTGA count=44 | |
| AB016424 | Trailer TTATAT, Position 1016 Mus musculus rbm3 mRNA |
| TAGGCACTAC count=44 | |
| M22479 | Trailer ATATGT, Position 1564 Mouse tropomyosin isoform 2 mRNA |
| AAAAAAAAAA count=43 | |
| U95215 | Trailer AAAAAA, Position 1851 Mus musculus bile acid CoA: amino acid N-acyltransferase (Baat) |
| X82648 | Trailer AAAAAA, Position 878 M.musculus mRNA for apolipoprotein D. |
| AF218865 | Trailer AAAAAA, Position 2807 Mus musculus BETA3 mRNA |
| AF146227 | Trailer AAAAAA, Position 2880 Mus musculus MutS homolog 5 (Msh5) mRNA |
| AF107352 | Trailer AAAAAA, Position 2669 Mus musculus MSH5 (Msh5) mRNA |
| AB041581 | Trailer AAAAAA, Position 1864 Mus musculus brain cDNA |
| TGCGCTTCCA count=43 | |
| Z85979 | Trailer GAGTGC, Position 348 M.musculus mRNA for histone H3.3A. |
| X91866 | Trailer GAGTGC, Position 627 M.musculus mRNA for H3.3A variant histone. |
| AATAAATGTG count=42 | |
| X02389 | Trailer ATTTTT, Position 2274 Mouse mRNA for urokinase. |
| AF155821 | Trailer TGAATT, Position 4255 Mus musculus CPG16 (Cpg16) mRNA |
| AF155820 | Trailer TGAATT, Position 1652 Mus musculus doublecortin-like protein (Dcl) mRNA |
| AF155819 | Trailer TGAATT, Position 5203 Mus musculus doublecortin-like kinase (Dclk) mRNA |
| TCACTCAGCA count=42 | |
| U70494 | Trailer ACAAGT, Position 895 Mus musculus histone H2A.Z (H2A.Z) mRNA |
| ATGTTATTCA count=41 | |
| U37721 | Trailer ATTCCA, Position 326 Mus musculus cytochrome c oxidase subunit VIII precursor (Cox8l) |
| AGTGGCTTTG count=40 | |
| U65636 | Trailer AATGAA, Position 782 Mus musculus beta proteasome subunit (Lmp3) mRNA |
| TGACGTGCCG count=39 | |
| M32599 | Trailer CCTGGA, Position 770 Mouse glyceraldehyde-3-phosphate dehydrogenase mRNA |
| CTGTGGATGA count=38 | |
| AF027707 | Trailer GGGGGT, Position 1374 Mus musculus apoptosis activator Mtd (Mtd) mRNA |
| AAGAAATACA count=37 | |
| U27316 | Trailer CATAAT, Position 964 Mus musculus adenine nucleotide translocase-2 (Ant2) mRNA |
| U10404 | Trailer CATAA , Position 879 Mus musculus adenine nucleotide translocase mRNA |
| X70847 | Trailer CATAAT, Position 966 M.musculus mRNA for adenine nucleotide translocase. |
| TACAAATGTG count=37 | |
| X03688 | Trailer GTGGAA, Position 139 Mouse mRNA fragment for elongation factor TU (N-terminus). |
| GATGAAGAAC count=36 | |
| U48364 | Trailer CTGTTA, Position 6141 Mus musculus muscle-specific transcriptional activator alpha-NAC |
| U22151 | Trailer CTGTTA, Position 190 Mus musculus translational regulatory factor alpha NAC/1.9.2. |
| CCACGTATCC count=35 | |
| D10916 | Trailer TGGGCC, Position 84 Mus musculus NEDD-6 mRNA |
| U12403 | Trailer TGGGCC, Position 372 Mus musculus Csa-19 mRNA |
| CTACTGTGGA count=35 | |
| J04633 | Trailer TGACAC, Position 2367 Mouse heat shock protein 86 mRNA |
| X16857 | Trailer TGACAC, Position 731 Mouse mRNA for HSP86 heat-shock protein. |
| TATTGAAAGT count=35 | |
| X00525 | Trailer CAGCCC, Position 4676 Mouse 28S ribosomal RNA. |
| TGCATGCCCT count=35 | |
| J04716 | Trailer GGGTTC, Position 511 Mouse ferritin light chain |
| TGTCTGTGTG count=35 | |
| J04696 | Trailer CTGCCT, Position 935 Mouse glutathione S-transferase class mu (GST5-5) mRNA |
| ACTCAGTGAA count=33 | |
| AF171100 | Trailer CAATCC, Position 1952 Mus musculus TBX1 protein mRNA |
| CATATACCCA count=33 | |
| M88756 | Trailer TTAATA, Position 20 M.musculus mRNA polyA site sequence. |
| U11027 | Trailer TTAATA, Position 171 Mus musculus C57BL/6J Sec61 protein complex gamma subunit mRNA |
| GCTCATGGAT count=33 | |
| AF224264 | Trailer ATTTTT, Position 1642 Mus musculus pigpen protein mRNA |
| TTGACCACTC count=33 | |
| D00472 | Trailer ATGGAA, Position 1043 Mus musculus mRNA for cofilin |
| AGAATAGCCA count=32 | |
| M58661 | Trailer CGTTTG, Position 1358 Mouse M1/69-J11d heat stable antigen mRNA |
| X53825 | Trailer CGTTTG, Position 1308 M.musculus mRNA for heat stable antigen. |
| AGGGAAGCAG count=32 | |
| L31642 | Trailer ACATT , Position 450 Mus musculus calmodulin (CamC) mRNA |
| ATGCTAAAAG count=31 | |
| X65704 | Trailer GAGATA, Position 195 M.musculus mRNA for small nuclear ribonucleoprotein E. |
| CCCCTCCCCC count=31 | |
| U88550 | Trailer GCTGGT, Position 4308 Mus musculus protocadherin 2C mRNA |
| GACCCATCAG count=31 | |
| AF060089 | Trailer GTGTTT, Position 463 Mus musculus proteasome subunit C8 (Psma3) mRNA |
| AF055983 | Trailer GTGTTT, Position 495 Mus musculus proteasome alpha7/C8 subunit mRNA |
| TCTGGCAGTG count=31 | |
| M33212 | Trailer GAGGAA, Position 928 Mouse nucleolar protein N038 mRNA |
| CACTGTGAAG count=30 | |
| AB021289 | Trailer GATGGC, Position 805 Mus musculus mRNA for epididymal secretory protein |
| CGATGCCCTC count=30 | |
| U01663 | Trailer TTTAGT, Position 1887 Mus musculus clone M5 transcription factor USF2 mRNA |
| TGTGGAGAAG count=30 | |
| AJ001633 | Trailer ATGATT, Position 1151 Mus musculus mRNA for annexin III. |
| ATGTGAGCAT count=29 | |
| X76772 | Trailer CGTGGA, Position 621 M.musculus mRNA for ribosomal protein S3. |
| GCCACCTACC count=29 | |
| M13805 | Trailer GCCGTC, Position 456 Mouse type I epidermal keratin mRNA |
| M28698 | Trailer GCAGCC, Position 1192 Mus musculus cytokeratin No. 19 mRNA |
| X03492 | Trailer GCAGCC, Position 804 Mouse mRNA for type I 47 kd keratin. |
| AF053235 | Trailer GCCGTC, Position 1239 Mus musculus keratin 16 mRNA |
| AB013608 | Trailer GCCGTC, Position 1165 Mus musculus mRNA for cytokeratin 17 |
| TGAAAATTGG count=29 | |
| X52940 | Trailer ATTAAA, Position 326 Mouse COX7c1 mRNA for cytochrome c oxidase VIIc (EC 1.9.3.1). |
| ATGGTGTAAT count=28 | |
| AF073993 | Trailer AAGACA, Position 1529 Mus musculus heterogenous nuclear ribonucleoprotein A2/B1 (hnRNP |
| CACATCTCAA count=28 | |
| M93980 | Trailer AGAAGT, Position 533 Mouse 24.6 kda protein mRNA |
| X75312 | Trailer AGAAGT, Position 526 M.musculus (C57BL/6) QM mRNA. |
| CCCACTTATG count=28 | |
| M24509 | Trailer TGACTT, Position 482 Mouse ferritin heavy chain |
| J03941 | Trailer TGACTT, Position 499 Mouse ferritin heavy chain (MFH) mRNA |
| X12812 | Trailer TGACTT, Position 445 Murine mRNA for macrophage ferritin heavy subunit. |
| TGTATTGTTC count=28 | |
| Z19599 | Trailer TTACTG, Position 1674 M.musculus epsilon 14-3-3 isoform mRNA. |
| D87663 | Trailer TTACTG, Position 1620 Mus musculus mRNA for 14-3-3 epsilon |
| AGGGACCACG count=27 | |
| X65553 | Trailer AACAGA, Position 2168 M.musculus mRNA for poly(A) binding protein. |
| GTGTTGTTTA count=27 | |
| U58633 | Trailer CCGTTG, Position 1043 Mus musculus p34 cdc2 kinase mRNA |
| X16461 | Trailer CCGTTG, Position 959 Mouse cdc2 mRNA for CDC2 kinase. |
| TCTCTTGCCA count=27 | |
| Z31555 | Trailer CCCAGA, Position 1647 M.musculus (129/Sv) Ccte mRNA for CCT (chaperonin containing TCP-1) |
| AAGCATTTGC count=26 | |
| X56602 | Trailer GCCTGA, Position 546 Mus musculus mRNA Interferon-induced 15-KDa protein. |
| AGGTTGAGGG count=26 | |
| Z31556 | Trailer GCAGCC, Position 1835 M.musculus (129/Sv) Cctg mRNA for CCT (chaperonin containing TCP-1) |
| ATGAGGGAGT count=26 | |
| X03040 | Trailer TCCGGT, Position 954 Mouse mRNA for initiation factor eIF-4A long form. |
| X03039 | Trailer TCCGGT, Position 951 Mouse mRNA for initiation factor eIF-4AI. |
| ATGCTCCTGC count=26 | |
| AB025408 | Trailer AGCTGA, Position 996 Mus musculus mRNA for sid478p |
| GTAAAATTAG count=26 | |
| M76124 | Trailer ACGAAC, Position 1246 Mus musculus EGP314 precursor mRNA |
| GTGACTGGGT count=26 | |
| M37829 | Trailer GGCCAT, Position 455 Mouse mitochondrial cytochrome c oxidase subunit IV (COX IV) mRNA |
| X54691 | Trailer GGCCAT, Position 457 Mouse COX4 mRNA for cytochrome c oxidase subunit IV (EC 1.9.3.1). |
| TGTGTAAATG count=26 | |
| D87896 | Trailer GGGACG, Position 540 Mus musculus phgpx mRNA for phospholipid hydroperoxide glutathione |
| AF045769 | Trailer GGGACG, Position 349 Mus musculus myocardium phospholipid hydroperoxide glutathione |
| AF045768 | Trailer GGGACG, Position 458 Mus musculus testis phospholipid hydroperoxide glutathione |
| TTTGTGAAGA count=26 | |
| D50527 | Trailer CCCTGA, Position 271 Mouse mRNA for TI-225 |
| CAGTGAGGAG count=25 | |
| AF156164 | Trailer CACCCG, Position 405 Mus musculus type I transmembrane protein Fn14 (Fn14) mRNA |
| CGGGTGTCCA count=25 | |
| AF060091 | Trailer GTGACA, Position 733 Mus musculus proteasome subunit X (Psmb5) mRNA |
| AB003304 | Trailer GTGACA, Position 736 Mus musculus mRNA for PSMB5 |
| TCAGGGCAGA count=25 | |
| D63707 | Trailer AATGAT, Position 1424 Mouse mRNA for hepatoma derived growth factor (HDGF) |
| AF251787 | Trailer AATGAT, Position 1583 Mus musculus TDRM1 protein (Tdrm1) mRNA |
| TGCAATGAGG count=25 | |
| X70303 | Trailer CTGGCT, Position 710 M.musculus MC3 mRNA for proteasome. |
| AF099733 | Trailer CTGGCT, Position 633 Mus musculus proteasome subunit C3 (Psma2) mRNA |
| ACCGACCGCA count=24 | |
| U76253 | Trailer TCGAGA, Position 757 Mus musculus E25B protein mRNA |
| AB030204 | Trailer TCGAGA, Position 573 Mus musculus mRNA for E25B protein |
| AB030203 | Trailer TCGAGA, Position 777 Mus musculus mRNA for E25B protein |
| ATTACCATTA count=24 | |
| AF108397 | Trailer GAATAT, Position 18 Mus musculus sodium/calcium exchanger isoform NaCa2 (Ncx1) mRNA |
| AF108396 | Trailer GAATAT, Position 18 Mus musculus sodium/calcium exchanger isoform NaCa3 (Ncx1) mRNA |
| TAGCTTTCTT count=24 | |
| U92454 | Trailer TTCATT, Position 493 Mus musculus WW domain binding protein 5 mRNA |
| TTGACGCTAA count=24 | |
| X53068 | Trailer ATGCAG, Position 1191 Mouse mRNA for proliferating cell nuclear antigen. |
| TTTTTTTTTT count=24 | |
| D89571 | Trailer TTTTTT, Position 2395 Mus musculus mRNA for ryudocan core protein |
| AATAAACCGT count=23 | |
| M11310 | Trailer TTTGAT, Position 3039 Mouse adenine phosphoribosyltransferase (APRT) |
| ATAAGAGGCA count=23 | |
| X53824 | Trailer CGTGAT, Position 746 Mouse X16 mRNA. |
| CAAAAAAAAA count=23 | |
| AF200349 | Trailer AAA , Position 2566 Mus musculus GPR35 mRNA |
| AB031055 | Trailer AAA , Position 1180 Mus musculus DDP1 mRNA for deafness dystonia protein 1 |
| CCCGTGCCCC count=23 | |
| X97490 | Trailer TGCCTA, Position 819 M.musculus mRNA for PNG protein. |
| CTTGATGCCT count=23 | |
| U60288 | Trailer GTGCCT, Position 795 Mus musculus proteasome subunit iota mRNA |
| TGTGGAGAAT count=23 | |
| U15571 | Trailer GTACAG, Position 3575 Mus musculus amyloid precursor-like protein 2 isoform 751 |
| Z27070 | Trailer GTACAG, Position 3422 M.musculus (balb/c) mRNA for putative protein. |
| GCCTGCACAT count=22 | |
| L02913 | Trailer CAGCCC, Position 311 Mouse growth factor-induced delayed early response protein |
| L10613 | Trailer CAGCCC, Position 337 Mus musculus glycosylation-inhibiting factor mRNA |
| L07607 | Trailer CAGCCC, Position 241 Mus musculus migration inhibitory factor (10K protein) mRNA |
| Z23048 | Trailer CAGCCC, Position 258 M.musculus macrophage migration inhibitory factor. |
| TAAAAAAAAA count=22 | |
| L07049 | Trailer AAAAAA, Position 7358 Mus musculus aggrecan mRNA |
| TTGTGTCAGT count=22 | |
| X61433 | Trailer CAGGTT, Position 1933 M.musculus mRNA for sodium/potassium ATPase beta subunit. |
| AACACCGCAA count=21 | |
| M13964 | Trailer CCTTTC, Position 1244 Mouse stimulatory G protein of adenylate cyclase |
| Y00703 | Trailer CCTTTC, Position 1298 Mouse uncoupled S49 cells mRNA for stimulatory GTP-binding protein |
| AF116268 | Trailer CCTTTC, Position 2386 Mus musculus G-protein XLalphas mRNA |
| AF107848 | Trailer CCTTTC, Position 2202 Mus musculus neuroendocrine-specific golgi protein p55 isoform 2 |
| AB041808 | Trailer CCTTTC, Position 1531 Mus musculus brain cDNA |
| AACATCATTG count=21 | |
| Z23055 | Trailer CAGCAG, Position 258 M.musculus protein-tyrosine-phosphatase mRNA |
| ATGACGCTGA count=21 | |
| M99167 | Trailer ATAAAT, Position 1329 Mouse rearranged RNA binding protein (FLI-2) mRNA |
| D86729 | Trailer ATAAAT, Position 1294 Mouse mRNA for topoisomerase-inhibitor suppressed |
| D86728 | Trailer ATAAAT, Position 1138 Mouse mRNA for topoisomerase-inhibitor suppressed |
| CACCAGCTGA count=21 | |
| M60419 | Trailer GAATTC, Position 1033 Mouse Y-box binding protein 1/DNA binding protein B mRNA |
| M62867 | Trailer GAATTC, Position 1033 Mouse Y box transcription factor (MSY-1) mRNA |
| X57621 | Trailer GAATTC, Position 938 M.musculus YB-1 mRNA. |
| U33197 | Trailer GAATTC, Position 1029 Mus musculus Y-box binding protein mYB-1b mRNA |
| AF038994 | Trailer GAATTC, Position 844 Mus musculus Y box transcription factor mRNA |
| CTTGCCAGTG count=21 | |
| Z31557 | Trailer TAAAAC, Position 2117 M.musculus (129/Sv) Cctz mRNA for CCT (chaperonin containing TCP-1) |
| GTTGTAATTG count=21 | |
| AF017153 | Trailer TTGACA, Position 2754 Mus musculus putative RNA helicase and RNA dependent ATPase |
| TCTGAGTTCA count=21 | |
| AJ278064 | Trailer CAACGG, Position 1906 Mus musculus mRNA for beta |
| AJ272020 | Trailer AGGCCA, Position 602 Mus musculus partial mRNA for 20S proteasome subunit C2 (Psma1 |
| AF294899 | Trailer CAACGG, Position 1908 Mus musculus beta |
| TGACACCCTC count=21 | |
| M36401 | Trailer TTCTGG, Position 85 Mouse B2 repetitive sequence mRNA. |
| AF127662 | Trailer TTCTGG, Position 2398 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase |
| AF127661 | Trailer TTCTGG, Position 2367 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase |
| AF127660 | Trailer TTCTGG, Position 2424 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha |
| AF127659 | Trailer TTCTGG, Position 2479 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase |
| AF127658 | Trailer TTCTGG, Position 2479 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha |
| AF127657 | Trailer TTCTGG, Position 2270 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase |
| AF127656 | Trailer TTCTGG, Position 2327 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha |
| AACAAGAAAT count=20 | |
| X14425 | Trailer GTTATG, Position 428 Mouse mRNA for profilin. |
| AAGGTGGGAG count=20 | |
| AF197951 | Trailer ATGCCA, Position 181 Mus musculus thioredoxin peroxidase PMP20 mRNA |
| AF124994 | Trailer ATGCCA, Position 270 Mus musculus peroxisomal membrane protein 20 mRNA |
| AF110733 | Trailer ATGCCA, Position 107 Mus musculus peroxiredoxin 5 (Prdx5) mRNA |
| AB041573 | Trailer ATGCCA, Position 514 Mus musculus brain cDNA |
| ACAGTATTGT count=20 | |
| M28739 | Trailer CTCAGA, Position 442 Mouse beta-tubulin gene M-beta-2 |
| AGCCCCGCCT count=20 | |
| U94479 | Trailer GTCACA, Position 1694 Mus musculus integrin binding protein kinase mRNA |
| AGTTAATTTA count=20 | |
| U75680 | Trailer CCATGT, Position 1484 Mus musculus histone stem-loop binding protein (SLBP) mRNA |
| ATCCACCTGC count=20 | |
| U78085 | Trailer TCACTG, Position 359 Mus musculus ribosomal protein S5 mRNA |
| Y12431 | Trailer TCACTG, Position 349 M.musculus mRNA for ribosomal protein S5. |
| TGTAATTTCT count=20 | |
| AB025406 | Trailer TCTCTA, Position 1339 Mus musculus mRNA for sid23p |
| TGTCTCTCCC count=20 | |
| S70184 | Trailer AGATGG, Position 740 MHC I=H-2Kd homolog [alternatively spliced |
| M23900 | Trailer AGATTG, Position 8 Mus musculus PYS-2 mRNA |
| M23899 | Trailer AGATTG, Position 57 Mus musculus PYS-2 mRNA |
| M23896 | Trailer AGATTG, Position 169 Mus musculus PYS-2 mRNA |
| M23895 | Trailer AGATTG, Position 169 Mus musculus PYS-2 mRNA |
| M23894 | Trailer AGATTG, Position 169 Mus musculus PYS-2 mRNA |
| M23893 | Trailer AGATTG, Position 169 Mus musculus mRNA |
| M69073 | Trailer AGATTG, Position 1051 Mus musculus mRNA |
| M69072 | Trailer AGATTG, Position 1051 Mus musculus mRNA |
| M69071 | Trailer AGATTG, Position 1051 Mus musculus mRNA |
| D00611 | Trailer AGAAAT, Position 328 Mus musculus mRNA for basigin |
| Y16258 | Trailer AGAAAT, Position 270 Mus musculus mRNA for basigin III |
| Y16257 | Trailer AGAAAT, Position 324 Mus musculus mRNA for basigin II |
| Y16256 | Trailer AGAAAT, Position 328 Mus musculus mRNA for basigin |
| AB024935 | Trailer GTTCAG, Position 1145 Mus musculus Sid3177 mRNA |
| X62897 | Trailer AAAA , Position 533 Mus musculus mRNA for skeletal muscle chloride channel |
| X62896 | Trailer AAAA , Position 730 M.musculus mRNA (cDNA2) skeletal muscle chloride channel |
| Y12883 | Trailer AAAAAA, Position 1446 M.musculus mRNA for nonselenium glutathione peroxidase. |
| AGCCTCTGCT count=19 | |
| D86604 | Trailer GCACCT, Position 4963 Mouse mRNA for Bach protein 2 |
| CACCTGCATC count=19 | |
| AF104358 | Trailer TGCATT, Position 1544 Mus musculus synectin mRNA |
| AF061263 | Trailer TGCATT, Position 1501 Mus musculus semaF cytoplasmic domain associated protein 1 |
| CAGTATATGC count=19 | |
| M33934 | Trailer CTTGAA, Position 1617 Mouse IMP dehydrogenase mRNA |
| CAGTATCTGA count=19 | |
| L13791 | Trailer AAGACC, Position 1083 Mus musculus (clone Chop11) C/ATF mRNA |
| M94087 | Trailer AAGACC, Position 1245 M.musculus mATF4 (mTR67) mRNA |
| X61507 | Trailer AAGACC, Position 1255 M.musculus ATF-4 gene for activating transcription factor 4. |
| AB012277 | Trailer AAGACC, Position 726 Mus musculus mRNA for ATF4 |
| CATCTGTGTA count=19 | |
| L19661 | Trailer GTTTCT, Position 1266 Mus musculus (clones pB1001 |
| X97982 | Trailer GTTTCT, Position 1314 M.musculus mRNA for poly(C)-binding protein |
| X75947 | Trailer GTTTCT, Position 1260 M.musculus mCBP mRNA. |
| CTCCAGCTCC count=19 | |
| Z31399 | Trailer ATCAGC, Position 1584 M.musculus Ccth mRNA for CCT eta subunit (chaperonin containing |
| GTCGTGACAG count=19 | |
| X65627 | Trailer ATACTC, Position 1634 M.musculus mRNA TNZ2 for p68 RNA helicase. |
| TATCCAATGG count=19 | |
| U30839 | Trailer GAGGTC, Position 1084 Mus musculus voltage dependent anion channel 3 mRNA |
| TTCAAGAAGG count=19 | |
| U43918 | Trailer AAAAGG, Position 452 Mus musculus proliferation-associated protein 1 mRNA |
| X84789 | Trailer AAAAGG, Position 358 M.musculus mRNA for p38-2G4. |
| TTGGATAAAA count=19 | |
| U27315 | Trailer CCAGAC, Position 1064 Mus musculus adenine nucleotide translocase-1 (Ant1) mRNA |
| X74510 | Trailer CCAGAC, Position 1071 M.musculus ANC1 mRNA for adenine nucleotide carrier. |
| TTTGGCACCA count=19 | |
| AF232717 | Trailer TTGGAA, Position 950 Mus musculus protein arginine N-methyltransferase 1 (Mrmt1) mRNA |
| AF232716 | Trailer TTGGAA, Position 1004 Mus musculus protein arginine N-methyltransferase 1 (Mrmt1) mRNA |
| AAAACCAACC count=18 | |
| M27358 | Trailer CGGTGA, Position 227 Mouse 18S ribosomal RNA |
| AAAATTGAAC count=18 | |
| Z46757 | Trailer ACCCAG, Position 432 M.musculus mRNA for high mobility group 2 protein. |
| AATATTTATT count=18 | |
| X58486 | Trailer GATGTG, Position 367 M.musculus mRNA for cytochrome c oxidase subunit VIIa. |
| AF037371 | Trailer GATGTG, Position 409 Mus musculus cytochrome c oxidase subunit VIIa-L precursor (Cox7al) |
| AGGAGCTGGC count=18 | |
| L19737 | Trailer ATTGGC, Position 245 Mus musculus H+ ATP synthase subunit c mRNA |
| ATCCAGTCCA count=18 | |
| X15358 | Trailer ACGGGC, Position 349 Mouse mRNA for junD proto-oncogene. |
| ATCCTTGTGT count=18 | |
| U14648 | Trailer TGTGAA, Position 1731 Mus musculus putative myelin regulatory factor 1 mRNA |
| AF077858 | Trailer TGTGAA, Position 1710 Mus musculus splicing factor SC35 mRNA |
| TACTTCCTGA count=18 | |
| U27106 | Trailer GTGCTG, Position 2012 Mus musculus clathrin-associated AP-2 complex AP50 subunit mRNA |
| TTTGGAAACA count=18 | |
| M63114 | Trailer TCAAAA, Position 3239 Mouse surfeit locus surfeit 4 protein mRNA |
| AAGCCCTTCT count=17 | |
| X77585 | Trailer TCCATT, Position 185 M.musculus mRNA for thioredoxin. |
| AGTAAATTAC count=17 | |
| X16319 | Trailer ATGATA, Position 2079 Mouse mRNA for 54K subunit of signal recognition particle. |
| CCAGTAATGT count=17 | |
| U97327 | Trailer AAACAA, Position 1107 Mus musculus calcyclin binding protein (CACYBP) mRNA |
| CTGCCCTGAG count=17 | |
| U51679 | Trailer CACACC, Position 813 Mus musculus thioredoxin peroxidase (Tpx) mRNA |
| U20611 | Trailer CACACC, Position 838 Mus musculus thioredoxin-dependent peroxide reductase (tpx) mRNA |
| X82067 | Trailer CACACC, Position 845 M.musculus mRNA for thiol-specific antioxidant. |
| CTGGGTACTA count=17 | |
| J03636 | Trailer AGGTCA, Position 303 Mouse T-cell-activating protein (TAP) mRNA |
| M18184 | Trailer AGGTCA, Position 270 Mouse lymphocyte differentiation antigen (Ly-6.2) mRNA |
| X04653 | Trailer AGGTCA, Position 346 Mouse mRNA for Ly-6 alloantigen (Ly-6E.1). |
| CTGGTAATGC count=17 | |
| X61232 | Trailer ACTTTG, Position 1826 Mouse mRNA for carboxypeptidase H. |
| GCATTGCGCA count=17 | |
| D49686 | Trailer GGGGAG, Position 1400 Mus musculus mRNA for Tat binding protein-1 |
| GCCATTGGTG count=17 | |
| D16432 | Trailer TAGCGG, Position 138 Mouse murine CD63 mRNA for murine homologue of CD63/ME491 |
| AF159427 | Trailer TAGCGG, Position 109 Mus musculus tetraspanin membrane protein CD63 mRNA |
| TAAAAACTCA count=17 | |
| U89876 | Trailer TGTAAA, Position 950 Mus musculus transcriptional coactivator ALY (ALY) mRNA |
| TTCCCGTTGG count=17 | |
| D21252 | Trailer CCGCTC, Position 499 Mouse mRNA for OSF-3 |
| D16142 | Trailer CCGCTC, Position 495 Mouse mRNA for MSP23. |
| ACAAATAAAT count=16 | |
| U01137 | Trailer GGTGCT, Position 938 Mus musculus B6D2F1 clone 2C#4 mRNA. |
| ACATTTTTTT count=16 | |
| L32974 | Trailer TCTCTG, Position 1684 Mouse interferon-inducible protein homologue mRNA |
| ACCCGTCATA count=16 | |
| AF043120 | Trailer AAATCT, Position 1565 Mus musculus beta prime coatomer protein mRNA |
| AGCTTCATCA count=16 | |
| M14220 | Trailer AGCAAC, Position 1687 Mouse neuroleukin mRNA |
| L09104 | Trailer AGCAAC, Position 2897 Mus musculus glucose phosphate isomerase mRNA |
| CAACTCCAAT count=16 | |
| M16465 | Trailer TCAACA, Position 479 Mouse calpactin I light chain (p11) mRNA |
| CACACGGAAG count=16 | |
| X13333 | Trailer GGGAAA, Position 1292 Mouse CD14 mRNA for myelid cell-specific leucine-rich glycoprotein. |
| GAGTACTTTT count=16 | |
| X56548 | Trailer , Position 1325 M.musculus Np-b mRNA for purine-nucleoside phosphorylase. |
| TAATGGTCCT count=16 | |
| U80819 | Trailer AACAGT, Position 983 Mus musculus glutathione-S-transferase homolog mRNA |
| TGAATGTCCG count=16 | |
| AF304351 | Trailer AGAGAG, Position 910 Mus musculus eukaryotic translation elongation factor 1-delta mRNA |
| TGACCACATG count=16 | |
| Z16406 | Trailer TCCTAC, Position 258 Mus musculus Mox-2A mRNA. |
| TTCACACAGC count=16 | |
| M58761 | Trailer ATTATG, Position 1278 Mouse Sm-B protein gene |
| TTCTCTATGA count=16 | |
| D78355 | Trailer AAACAT, Position 1191 Mus musculus TRA1 mRNA |
| D78354 | Trailer AAACAT, Position 982 Mus musculus TRA1 mRNA |
| AF159593 | Trailer AAACAT, Position 1388 Mus musculus phospholipid scramblase 1 mRNA |
| TTCTCTGCCT count=16 | |
| AF162768 | Trailer ATATCA, Position 531 Mus musculus actin-related protein complex 1b (Arpc1b) mRNA |
| TTGTGGATTC count=16 | |
| U76960 | Trailer GTTAGT, Position 838 Mus musculus domesticus CDC42 protein (CDC42) mRNA |
| U37720 | Trailer GTTAGT, Position 1950 Mus musculus CDC42 mRNA |
| ACAAAGTTTG count=15 | |
| L01062 | Trailer AGAATG, Position 1547 Mouse ATP synthase alpha subunit |
| ATAAGTCTTA count=15 | |
| AB025405 | Trailer ACTTTT, Position 1063 Mus musculus mRNA for sid2895p |
| ATAATTGCTG count=15 | |
| AF004565 | Trailer TATCAT, Position 785 Mus musculus dUTPase mRNA |
| ATAGGCAAAC count=15 | |
| Y17223 | Trailer GTGGCA, Position 284 Mus musculus mRNA for F1F0-ATP synthase |
| ATTTATGGAG count=15 | |
| X53333 | Trailer GTTCTG, Position 654 Mouse mRNA for triosephosphate isomerase (EC 5.3.1.1). |
| CAAATATTGT count=15 | |
| M73329 | Trailer CATAGC, Position 1352 Mouse phospholipase C-alpha (PLC-alpha) mRNA |
| CCCAACAATG count=15 | |
| M28732 | Trailer TCAAGA, Position 60 Mouse beta-tubulin gene M-beta-5 |
| CCCTTTCCTC count=15 | |
| M63170 | Trailer ATTGAG, Position 528 Mouse alpha-B crystallin mRNA. |
| CGTATTACCT count=15 | |
| AF097438 | Trailer ATTGTG, Position 765 Mus musculus brain expressed X-linked protein 1 (Bex1) mRNA |
| AF051347 | Trailer ATTGTG, Position 753 Mus musculus REX-3 mRNA |
| CTGTACAGCC count=15 | |
| U04443 | Trailer AGTGTG, Position 48 Mus musculus non-muscle myosin light chain 3 (MLC3nm) mRNA |
| TATGAGTGAC count=15 | |
| M65037 | Trailer AG , Position 447 Mouse metastasis-reducing protein (nm23) mRNA |
| TGCAGGAGGA count=15 | |
| U20326 | Trailer TGAAGC, Position 321 Mus musculus cellular nucleic acid binding protein mRNA |
| Z11871 | Trailer TGAAGC, Position 285 M.musculus mRNA for cellular nucleic acid binding protein. |
| Z11870 | Trailer TGCCTG, Position 285 M.musculus mRNA for cellular nucleic acid binding protein. |
| X63866 | Trailer TGCCTG, Position 285 Mus musculus mRNA for cellular nucleic acid binding protein. |
| TGCCCACCAT count=15 | |
| AF119675 | Trailer ATTCCT, Position 911 Mus musculus small GTP-binding protein RAB25 (Rab25) mRNA |
| TGCTAGAGCT count=15 | |
| M30779 | Trailer GTAATA, Position 517 Mouse glucose-regulated protein 78 mRNA |
| D78645 | Trailer GTAATA, Position 2068 Mouse mRNA for 78 kDa glucose-regulated protein |
| M19351 | Trailer GTAATA, Position 437 Mouse immunoglobulin heavy chain binding protein mRNA |
| AJ002387 | Trailer GTAATA, Position 1987 Mus musculus mRNA for BiP. |
| AAGGACATTT count=14 | |
| AF019661 | Trailer AAGAAG, Position 777 Mus musculus zeta proteasome chain mRNA |
| ACTGATGTCA count=14 | |
| D78642 | Trailer TTGCAA, Position 2067 Mouse mRNA for CAAT-box binding protein NF-YA |
| ACTGTCACTT count=14 | |
| D17653 | Trailer CAGAGG, Position 229 Mouse mRNA for HBp15/L22 |
| AGCCGCTCAA count=14 | |
| AF019662 | Trailer GATTCT, Position 669 Mus musculus C6-I proteasome chain mRNA |
| AGGATTATGG count=14 | |
| M24554 | Trailer TCTCCC, Position 873 Mouse lipocortin I mRNA |
| X07486 | Trailer TCTCCC, Position 901 Mouse mRNA for lipocortin I. |
| AGTCTATGAG count=14 | |
| D78188 | Trailer TCAATA, Position 2419 Mouse mRNA for SCID complementing gene 2. |
| AGTTGCCTGA count=14 | |
| U34259 | Trailer TTTCCC, Position 1168 Mus musculus lysosome-associated protein |
| ATGAAAAAGA count=14 | |
| M80263 | Trailer ATATGA, Position 1133 Mouse mRNA sequence. |
| M70642 | Trailer ATATGA, Position 1067 Mouse FISP-12 protein (fisp-12) mRNA |
| ATGGAAGCAG count=14 | |
| D49429 | Trailer ACATTC, Position 3182 Mouse NCBP-29 mRNA for PW29 |
| D37790 | Trailer ACATTC, Position 2555 Mouse mRNA for beta-1 |
| CCCATCATCA count=14 | |
| AF176516 | Trailer TTCGCC, Position 1785 Mus musculus E2F1-inducible (Eig4) mRNA |
| CGCTTGGCAG count=14 | |
| U13393 | Trailer CCATTC, Position 579 Mus musculus delta proteasome subunit mRNA |
| CGGGGGTTCA count=14 | |
| L08115 | Trailer ATTTAT, Position 896 Mus musculus antigen (homologue of human CD9 antigen) mRNA |
| TCCTCAGCAT count=14 | |
| M10062 | Trailer TTTCTT, Position 2429 Mouse IgE-binding factor mRNA |
| TGATTCCCTC count=14 | |
| X56974 | Trailer TTCTGG, Position 1979 M.musculus mRNA for external transcribed spacer (partial) B2 |
| TGCATCGTGA count=14 | |
| U60824 | Trailer CCAAAG, Position 692 Mus musculus proteasome beta-subunit C5 (Psmb1) mRNA |
| X80686 | Trailer CCAAAG, Position 681 M.musculus mRNA for C5 component of protease. |
| TGGAACACCA count=14 | |
| AF004591 | Trailer ACTGCT, Position 314 Mus musculus copper transport protein Atox1 (ATOX1) mRNA |
| TGTTGTGGTG count=14 | |
| AF270646 | Trailer GGAACA, Position 902 Mus musculus c14orf1-like protein mRNA |
| TTCAGATTGA count=14 | |
| X12944 | Trailer TAATTC, Position 822 Mouse mRNA for HMG-17 chromosomal protein. |
| TTCAGCAGAT count=14 | |
| U05333 | Trailer ATTAGA, Position 236 Mus musculus co-chaperonin 'cofactor A' mRNA |
| TTTGATAAAA count=14 | |
| X59379 | Trailer AAAAAT, Position 2836 Mouse mRNA for amyloid beta precursor (protease nexin II). |
| AACAGTAGTT count=13 | |
| D83999 | Trailer GTCTTT, Position 1107 Mus musculus mRNA for the third largest RNA polymerase II subunit |
| ACAACTGATT count=13 | |
| U43084 | Trailer CCTGCT, Position 1688 Mus musculus glucocorticoid-attenuated response gene 16 (GARG-16) |
| ACCACCAGGA count=13 | |
| AF060092 | Trailer CGCTGA, Position 598 Mus musculus proteasome subunit C10-II (Psmb3) mRNA |
| ACCCAGAAGT count=13 | |
| D10024 | Trailer GGCTCT, Position 1044 Mouse mRNA for protein-tyrosine kinase substrate p36 (calpactin I |
| M14044 | Trailer GGCTCT, Position 1044 Mouse calpactin I heavy chain (p36) mRNA |
| AGAACAACAG count=13 | |
| AB027565 | Trailer ACAGTG, Position 3123 Mus musculus TXNRD1 mRNA for thioredoxin reductase 1 |
| ATTGTTTGTG count=13 | |
| U91848 | Trailer ATTGAA, Position 936 Mus musculus clathrin light chain 2 mRNA |
| CATCCAAAAA count=13 | |
| AF020185 | Trailer CAAGGA, Position 397 Mus musculus protein inhibitor of nitric oxide synthase (PIN) mRNA |
| CCAACAATGC count=13 | |
| AF175574 | Trailer AGCCAT, Position 1054 Mus musculus 26S proteasome subunit S5a mRNA |
| AF013099 | Trailer AGCCAT, Position 1045 Mus musculus multiubiquitin-chain-binding protein (Mcb1) mRNA |
| AB029144 | Trailer AGCCAT, Position 1547 Mus musculus mRNA for pUb-R3 |
| AB029143 | Trailer AGCCAT, Position 1054 Mus musculus mRNA for pUb-R2 |
| AB029142 | Trailer AGCCAT, Position 1045 Mus musculus mRNA for pUb-R1 |
| CCACTGGTTA count=13 | |
| AF004106 | Trailer GGAATA, Position 1082 Mus musculus unknown mRNA |
| CCATTTACTA count=13 | |
| Y13071 | Trailer TTTGAA, Position 1380 Mus musculus mRNA for 26S proteasome non-ATPase subunit. |
| CTATAAGTAA count=13 | |
| Y08460 | Trailer CCCCAA, Position 1750 Mus musculus mRNA for Mdes transmembrane protein. |
| CTCTTCCACG count=13 | |
| Y00516 | Trailer AGACAC, Position 308 Mouse mRNA for aldolase A. |
| CTGGCTGATG count=13 | |
| Y11460 | Trailer TGCTCA, Position 144 Mus musculus mRNA for b4 integrin interactor |
| AF108462 | Trailer TCCTCA, Position 681 Mus musculus b4 integrin interactor homolog mRNA |
| AF047046 | Trailer TCCTCA, Position 612 Mus musculus translation initiation factor eIF6 mRNA |
| TCAGAACACA count=13 | |
| U16740 | Trailer CAGGTA, Position 2544 Mus musculus capping protein alpha 1 subunit mRNA |
| TCTTCCATGT count=13 | |
| AB025409 | Trailer TACAAG, Position 706 Mus musculus mRNA for sid1334p |
| TGCACTCGGT count=13 | |
| D86370 | Trailer ACCCTC, Position 1456 mouse mRNA for megakaryocyte potentiating factor |
| TGGCTGGCCC count=13 | |
| AF144702 | Trailer CACTGA, Position 700 Mus musculus small zinc finger-like protein (Tim13) mRNA |
| TGGTTCCTGA count=13 | |
| X15963 | Trailer GCCCAA, Position 249 Mouse mRNA for cytochrome c oxidase subunit Va. |
| TTAAATAAAA count=13 | |
| AB025049 | Trailer CTTGTT, Position 1587 Mus musculus mRNA for Sid393p |
| TTTGGGGGAA count=13 | |
| X80421 | Trailer TTGTTA, Position 91 M.musculus tex190 mRNA (3'region). |
| AATGTGTAGA count=12 | |
| M20617 | Trailer TGCCAT, Position 1410 Mouse ornithine decarboxylase mRNA |
| M12330 | Trailer TGCCAT, Position 843 Mouse kidney ornithine decarboxylase mRNA |
| M10624 | Trailer TGCCAT, Position 2111 Mouse ornithine decarboxylase mRNA |
| ACCTTTGTCT count=12 | |
| D26091 | Trailer GATAGC, Position 2251 Mus musculus mRNA for mCDC47 |
| ACTCTGGAGT count=12 | |
| L75822 | Trailer TCAGCG, Position 605 Mus musculus follistatin-like protein (mac25) mRNA |
| AB012886 | Trailer TCAGCG, Position 627 Mus musculus mRNA for mac25 |
| TCAGTTCTGT count=12 | |
| M88755 | Trailer GTTTAC, Position 768 M.musculus mRNA polyA site sequence. |
| AF011644 | Trailer GTTTAC, Position 870 Mus musculus oral tumor suppressor homolog (Doc-1) mRNA |
| TGCAACCCTA count=12 | |
| M18626 | Trailer TAGGTG, Position 292 Mouse long interspersed reptative mRNA. |
| TGGATTGTGG count=12 | |
| U35249 | Trailer AGCCAA, Position 1104 Mus musculus CDK-activating kinase assembly factor p36/MAT1 |
| AAATTGGTAC count=11 | |
| AF035821 | Trailer AGAAAT, Position 466 Mus musculus GES30 mRNA |
| AF035208 | Trailer AGAAAT, Position 480 Mus musculus putative v-SNARE Vti1b mRNA |
| AATCAGAGAT count=11 | |
| AF190797 | Trailer TCAGTT, Position 844 Mus musculus actin-related protein 11 (Arp11) mRNA |
| AATGGCTTTG count=11 | |
| M35248 | Trailer ATGCAG, Position 1561 Mouse MHC class I H2-TL-T9-c mRNA (d haplotype) |
| M35247 | Trailer ATGCAG, Position 1642 Mouse MHC class I H2-TL-T17-c mRNA (d haplotype) |
| M35244 | Trailer ATGCAG, Position 1643 Mouse MHC class I H2-TL-T10-129 mRNA (b haplotype) |
| M35246 | Trailer ATGCAG, Position 1567 Mouse MHC class I H2-TL-T10-b mRNA (b haplotype) |
| M35245 | Trailer ATGCAG, Position 1680 Mouse MHC class I H2-TL-27-b mRNA (b haplotype) |
| M35243 | Trailer ATGCAG, Position 1649 Mouse MHC class I H2-TL-27-129 mRNA (b haplotype) |
| ACAAATACAG count=11 | |
| X12507 | Trailer ATTCTG, Position 1373 Mouse eIF-4AII mRNA for protein synthesis initiation factor 4AII. |
| ACAGTCTTTC count=11 | |
| U52822 | Trailer AGCTAG, Position 266 Mus musculus ornithine decarboxylase antizyme mRNA |
| AGGCCTTTAG count=11 | |
| U27340 | Trailer AGCGAT, Position 2059 Mus musculus sulfated glycoprotein (Sgp1) mRNA |
| ATCTTGTCAC count=11 | |
| D16262 | Trailer TCCTTT, Position 1765 Mouse mRNA encoding unknown protein |
| ATGCAGAAGA count=11 | |
| M25825 | Trailer ACGGTG, Position 216 Mouse tctex-1 mRNA |
| CAAATAAAAA count=11 | |
| L17076 | Trailer AAAA , Position 1500 Mus musculus (clones EcDNA1 and EcDNA4) RNA-binding protein mRNA |
| CAAGTCATGA count=11 | |
| J02583 | Trailer TTTGAA, Position 1168 Mouse cysteine proteinase mRNA |
| X06086 | Trailer TTTGAA, Position 1177 Mouse mRNA for major excreted protein (MEP). |
| AF121839 | Trailer TTTGAA, Position 1155 Mus musculus cell-line LXB2 cathepsin L mRNA |
| AF121838 | Trailer TTTGAA, Position 1155 Mus musculus cell-line LXA1 cathepsin L mRNA |
| AF121837 | Trailer TTTGAA, Position 1155 Mus musculus cell-line L929 cathepsin L mRNA |
| CATGAAGTTT count=11 | |
| AF088911 | Trailer TCAGTC, Position 1226 Mus musculus protein phosphatase X (Ppx) mRNA |
| CCCAAGATTG count=11 | |
| U60329 | Trailer AGGATG, Position 385 Mus musculus proteasome activator PA28 beta subunit mRNA |
| D87910 | Trailer AGGATG, Position 403 Mus musculus mRNA for PA28 beta subunit |
| CCCTGGATAC count=11 | |
| L25674 | Trailer ATGGTC, Position 1566 Mus musculus ear-2 transcription factor mRNA |
| X76654 | Trailer ATGGTC, Position 1660 M.musculus mRNA for EAR2. |
| CCTATTATGG count=11 | |
| Y17345 | Trailer CAATGA, Position 388 Mus musculus mRNA for protein-tyrosine-phosphatase IF1. |
| Y17344 | Trailer CAATGA, Position 649 Mus musculus mRNA for protein-tyrosine-phosphatase IF2. |
| Y17343 | Trailer CAATGA, Position 388 Mus musculus mRNA for protein-tyrosine-phosphatase IF2P. |
| CTAAAGAAAG count=11 | |
| M73963 | Trailer ATTACG, Position 2195 Mus musculus UCR-motif DNA-binding protein (UCRBP) mRNA |
| CTCTAGGGGT count=11 | |
| AB012276 | Trailer TATGGG, Position 799 Mus musculus mRNA for ATFx |
| CTGTGATGAC count=11 | |
| AB008895 | Trailer AATAAA, Position 3027 Mus musculus mRNA for mGpi1p |
| CTTCCTATGC count=11 | |
| U25708 | Trailer AGAACC, Position 1707 Mus musculus CD98 heavy chain mRNA |
| X14309 | Trailer AGAACC, Position 1672 Murine mRNA for 4F2 antigen heavy chain. |
| AB023408 | Trailer AGAACC, Position 1685 Mus musculus mRNA for 4F2 heavy chain |
| GCCAAAATCC count=11 | |
| AB015613 | Trailer TAAATT, Position 233 Mus musculus mRNA for SET |
| TAAAGAAACA count=11 | |
| U95498 | Trailer CCAGAG, Position 1205 Mus musculus AF1q mRNA |
| AB000733 | Trailer CCAGAG, Position 1217 Mouse mRNA for AF1q |
| TAAGCCAGAA count=11 | |
| M33215 | Trailer GGGGCG, Position 494 Mouse beta-galactoside-binding lectin (L-34) mRNA |
| J03723 | Trailer GGGGCG, Position 786 Mouse carbohydrate binding protein 35 mRNA |
| X16834 | Trailer GGGGCG, Position 832 Mouse mRNA for Mac-2 antigen. |
| TAATAAACCA count=11 | |
| AF188712 | Trailer AGTGGC, Position 1951 Mus musculus mitochondrial dicarboxylate carrier mRNA |
| AF125536 | Trailer ATTGGT, Position 1802 Mus musculus histone deacetylase-3 (Hdac3) mRNA |
| AF098295 | Trailer ATTGGT, Position 1795 Mus musculus histone deacetylase 3 (Hdac3) mRNA |
| AF074882 | Trailer ATTGGT, Position 1241 Mus musculus strain C57BL/6J histone deacetylase 3 (Hdac3) mRNA |
| AF074881 | Trailer ATTGGT, Position 1814 Mus musculus strain C3H histone deacetylase 3 (Hdac3) mRNA |
| TATGAGTGAT count=11 | |
| M35970 | Trailer AGGACG, Position 489 Mouse tumor metastatic process-associated protein (NM23) gene mRNA |
| U85511 | Trailer AGGACG, Position 539 Mus musculus nucleoside diphosphate kinase A long form mRNA |
| AF033377 | Trailer AGGACG, Position 487 Mus musculus nucleoside diphosphate kinase A (NDPK-A) long form |
| TATTTCTGAG count=11 | |
| AF003346 | Trailer TATGTG, Position 1012 Mus musculus ubiquitin-conjugating enzyme UbcM2 mRNA |
| TCACTCTCAG count=11 | |
| M35725 | Trailer GAGAGC, Position 316 Mouse Cu-Zn superoxide dismutase mRNA |
| X06683 | Trailer GAGAGC, Position 316 Mouse mRNA for Cu-Zn superoxide dismutase (EC 1.15.1.1). |
| TCCTTGGAGT count=11 | |
| U09192 | Trailer CTCAAG, Position 721 Mus musculus thymic shared antigen-1 mRNA |
| U04268 | Trailer CTCAAG, Position 696 Mus musculus C57BL/6 Sca-2 precursor mRNA |
| TGATAAAATT count=11 | |
| M12899 | Trailer ACACCC, Position 1644 Mouse t complex polypeptide 1 (Tcp-1-b) mRNA |
| M20130 | Trailer ACACCC, Position 709 Mouse t complex polypeptide 1 (Tcp-1-a) mRNA |
| D90344 | Trailer ACACCC, Position 1637 Mouse mRNA for t-complex polypeptide 1A (Tcp-1a) |
| AACAGCGTTG count=10 | |
| AF271072 | Trailer CCTTCC, Position 880 Mus musculus TGF-beta receptor interacting protein 1 mRNA |
| AF188297 | Trailer CCTTCC, Position 903 Mus musculus TGF-beta receptor binding protein (Trip1) mRNA |
| AAGGGTGTCA count=10 | |
| U17332 | Trailer CGCTGG, Position 203 Mus musculus ribosomal protein L9 (musl9) mRNA |
| U17331 | Trailer CGCTGG, Position 203 Mus musculus mutant ribosomal protein L9 (musl9mu) mRNA |
| AATGCAATGA count=10 | |
| AF071315 | Trailer CGTGGG, Position 880 Mus musculus COP9 complex subunit 6 (COPS6) mRNA |
| ACCACCCCTG count=10 | |
| Z31553 | Trailer TTAAGC, Position 1648 M.musculus (129/Sv) Cctb mRNA for CCT (chaperonin containing TCP-1) |
| AB041570 | Trailer TTAAGC, Position 1528 Mus musculus brain cDNA |
| ACTTGTTATG count=10 | |
| AF092039 | Trailer TACATT, Position 745 Mus musculus steroid receptor RNA activator mRNA |
| AGACAAATGT count=10 | |
| AF073992 | Trailer GTCTGC, Position 1816 Mus musculus heterogenous nuclear ribonucleoprotein U (hnRNP U) |
| AGCTAAAGGC count=10 | |
| AF173297 | Trailer ACACTG, Position 276 Mus musculus e(y)2 homolog mRNA |
| AGCTATGAAG count=10 | |
| AB039919 | Trailer AAGGAA, Position 559 Mus musculus rheb mRNA for Ras homolog |
| AGGAGTACCA count=10 | |
| AF072243 | Trailer AATAAG, Position 1664 Mus musculus methyl-CpG binding protein MBD2 (Mbd2) mRNA |
| AGTTTCCTTG count=10 | |
| M14223 | Trailer ATTATT, Position 1992 Mouse ribonucleotide reductase M2 subunit mRNA |
| ATTAATGCCC count=10 | |
| U76112 | Trailer TTGAAG, Position 3620 Mus musculus translation repressor NAT1 mRNA |
| U63323 | Trailer CTGAAG, Position 3589 Mus musculus translation initiation factor (Eif4g2) mRNA |
| ATTAGGGGTT count=10 | |
| AF099020 | Trailer TGGTCT, Position 1024 Mus musculus hepatocyte growth factor activator inhibitor type 2 |
| AF099019 | Trailer TGGTCT, Position 951 Mus musculus hepatocyte growth factor activator inhibitor type 2 |
| AF099016 | Trailer TGGTCT, Position 1122 Mus musculus hepatocyte growth factor activator inhibitor type 2 |
| CAGAACAGTA count=10 | |
| U14172 | Trailer CAGCGT, Position 4765 Mus musculus p162 protein mRNA |
| CCAGATAGCT count=10 | |
| AJ010483 | Trailer TGAAAA, Position 1125 Mus musculus mRNA for CtBP1 protein. |
| AB033122 | Trailer TGAAAA, Position 1177 Mus musculus CtBP1 mRNA for C-terminal binding protein 1 |
| CCGCCCGTCA count=10 | |
| AF052621 | Trailer GCTCTT, Position 940 Mus musculus hypothetical protein COX4AL (COX4AL) mRNA |
| CCTCCCAGAA count=10 | |
| X53337 | Trailer ACCTGC, Position 1584 Mouse mRNA for cathepsin D (EC 3.4.23.5). |
| X52886 | Trailer ACCTGC, Position 1644 M.musculus mRNA for cathepsin D. |
| CGCGAATGCT count=10 | |
| AF124786 | Trailer CGGAGG, Position 181 Mus musculus NADH-ubiquinone oxidoreductase B8 subunit (Ndufa2) |
| CTGGACAGCA count=10 | |
| X61506 | Trailer GCAACA, Position 1398 Mouse E46 mRNA for E46 protein. |
| GACTCCAGAG count=10 | |
| AF095936 | Trailer ACGACT, Position 348 Mus musculus succinate dehydrogenase Ip subunit mRNA |
| GAGGCCCAGC count=10 | |
| M19226 | Trailer CCGTGG, Position 207 Mouse 28S large subunit rRNA |
| GTCAGTGACA count=10 | |
| U21489 | Trailer GCTAGA, Position 1275 Mus musculus long-chain acyl-CoA dehydrogenase mRNA |
| GTCTTGCCCA count=10 | |
| M69293 | Trailer GGTGTC, Position 646 Mouse Id2 protein (Id-2) mRNA |
| GTGTGTGTCT count=10 | |
| D83037 | Trailer GCGTGC, Position 1297 Mouse mRNA for 14-3-3 zeta |
| D87660 | Trailer GCGTGC, Position 1346 Mus musculus mRNA for 14-3-3 zeta |
| TCAATTGTAA count=10 | |
| AF133427 | Trailer ATAGAA, Position 1469 Mus musculus tetraspanin TM4-A homolog mRNA |
| TCTGTGAGTT count=10 | |
| M86671 | Trailer TGAGGA, Position 1739 Mus musculus interleukin 12 p40 subunit |
| AB041599 | Trailer CATTAA, Position 990 Mus musculus brain cDNA |
| TGACACAGGG count=10 | |
| X60671 | Trailer GCAGTC, Position 2575 M.musculus mRNA for ezrin. |
| TGACATTTGA count=10 | |
| D87903 | Trailer CACGAA, Position 1223 Mouse mRNA for ARF6 |
| TGCATCCCCA count=10 | |
| AF225564 | Trailer AAAGCA, Position 1021 Mus musculus aldehyde reductase (Akr1A4) mRNA |
| TGCCACTGTG count=10 | |
| X14805 | Trailer CAGGTG, Position 5167 Mus musculus mRNA for DNA methyltransferase 1. |
| AF036009 | Trailer CAGGTG, Position 5786 Mus musculus Dnmt1 mRNA |
| AF036007 | Trailer CAGGTG, Position 5164 Mus musculus DNA (cytosine-5)-methyltransferase (Dnmt1) mRNA |
| TGCCTGCCTC count=10 | |
| AF205540 | Trailer TTCCTC, Position 2690 Mus musculus intestinal low-affinity peptide transporter protein |
| TGCTCTGTTT count=10 | |
| M94450 | Trailer TATACC, Position 2370 Mus musculus epidermal growth factor receptor-binding protein GRB7 |
| TGGACTGGTG count=10 | |
| D14883 | Trailer TTTCTT, Position 1522 Mouse mRNA for C33/R2/IA4 |
| TGTAACTTAA count=10 | |
| AF181116 | Trailer TGGCAA, Position 823 Mus musculus brain protein 44-like protein (Brp44l) mRNA |
| TTACTATATA count=10 | |
| L10244 | Trailer AGAAAA, Position 836 Mouse spermidine/spermine N1-acetyltransferase (SSAT) mRNA |
| TTTATTTGGA count=10 | |
| U04354 | Trailer TTGGCA, Position 2034 Mus musculus ADSEVERIN mRNA |
| Y13971 | Trailer TTGGCA, Position 1734 Mus musculus mRNA for adseverin(D5). |
| AAAATGTTCA count=9 | |
| U42386 | Trailer ATCTTT, Position 1065 Mus musculus fibroblast growth factor inducible gene 14 (FIN14) |
| AACAAGCAGA count=9 | |
| U95736 | Trailer CCCCAA, Position 444 Mus musculus frataxin mRNA |
| AF223569 | Trailer CCGCAA, Position 316 Mus musculus frataxin pseudogene |
| AAGCAGCGAG count=9 | |
| Z14049 | Trailer AGGCTG, Position 759 M.musculus mRNA for 3 |
| AAGGAAATAA count=9 | |
| X80937 | Trailer ATTCAA, Position 3622 M.musculus mRNA for RIP1 protein. |
| AATGACAGAG count=9 | |
| AF159368 | Trailer TGAGGT, Position 517 Mus musculus TF-1 cell apoptosis related protein-15 (Tfar15) mRNA |
| ACTTTGTAGT count=9 | |
| AF071314 | Trailer CATGTA, Position 1515 Mus musculus COP9 complex subunit 4 (COPS4) mRNA |
| AGAAGGAGAT count=9 | |
| J02622 | Trailer ACTCTG, Position 2205 Mouse mitochondrial aspartate aminotransferase isoenzyme mRNA |
| AGGATGGCTG count=9 | |
| U49112 | Trailer GATTCA, Position 567 Mus musculus calcium-binding protein ALG-2 (ALG-257) mRNA |
| X14938 | Trailer GATTCA, Position 397 Mouse mRNA for calcium-binding protein. |
| ATCAGAGCCA count=9 | |
| AF171875 | Trailer CAGCTA, Position 1247 Mus musculus g1-related zinc finger protein (G1rp) mRNA |
| ATGATAGCAG count=9 | |
| X53157 | Trailer CACAGA, Position 159 Mouse mRNA for mitochondrial cytochrome c oxidase subunit Vb. |
| ATGCACTGGG count=9 | |
| J04179 | Trailer TTGGCT, Position 994 Mouse chromatin nonhistone high mobility group protein (HGM-I(Y) |
| ATGTGTACCC count=9 | |
| U92793 | Trailer AGGGGT, Position 3679 Mus musculus alpha glucosidase II alpha subunit mRNA |
| ATGTTTTGCT count=9 | |
| AF057287 | Trailer ACAGTT, Position 1549 Mus musculus RAB/Rip protein mRNA |
| ATTCAGACAG count=9 | |
| AF098967 | Trailer TACATT, Position 3406 Mus musculus interleukin enhancer binding factor 3 (Ilf3) mRNA |
| CAAGTCCAGG count=9 | |
| L03814 | Trailer AACCCT, Position 1225 Mouse regulatory protein (npdc-1) mRNA |
| X67209 | Trailer AACCCT, Position 1225 M.musculus npdc-1 mRNA for npdcf-1 protein. |
| CACCGAAGGA count=9 | |
| AF102817 | Trailer CATTAG, Position 798 Mus musculus nuclear LIM-only 4 protein (Lmo4) mRNA |
| CAGCACCGTG count=9 | |
| U18975 | Trailer TGTACC, Position 2010 Mus musculus beta-1 |
| CAGCTGGAAA count=9 | |
| U96746 | Trailer ACTGAA, Position 874 Mus musculus antioxidant enzyme AOE372 mRNA |
| CAGTTACCAG count=9 | |
| Y08702 | Trailer AAGATG, Position 429 M.musculus mRNA for neuronal protein 15.6. |
| CATATTTAGT count=9 | |
| AF139894 | Trailer TTTATA, Position 1277 Mus musculus RNA-binding protein alpha-CP1 (Pcbp1) mRNA |
| CATTTTAAAA count=9 | |
| M18209 | Trailer TTTGTA, Position 2420 Mouse transcription factor S-II |
| CCAGTGAAGG count=9 | |
| M63903 | Trailer GTTTCT, Position 1714 Mus musculus B/HLH/Z protein (Myn) mRNA |
| CCATATCCCT count=9 | |
| AB037370 | Trailer GTGAAA, Position 1492 Mus musculus Copz1 mRNA for nonclathrin coat protein zeta-COP |
| CCATTACAGA count=9 | |
| D16580 | Trailer TGGTTG, Position 3633 Mouse mRNA for peptidylarginine deiminase |
| CCCTTGGTTG count=9 | |
| AB024303 | Trailer CTGGAT, Position 1823 Mus musculus mRNA similar to human Sua1 |
| CCCTTTCCTG count=9 | |
| AF016294 | Trailer TGAATG, Position 1846 Mus musculus Ets transcription factor (ELF3) mRNA |
| CCTGAGTTCA count=9 | |
| U58884 | Trailer AGGCCA, Position 2218 Mus musculus SH3-containing protein SH3P7 mRNA |
| CGCTGTACTC count=9 | |
| AF071209 | Trailer TCCTCC, Position 1528 Mus musculus pituitary tumor transforming gene (Pttg) mRNA |
| AF069051 | Trailer TCCTCC, Position 814 Mus musculus pituitary tumor transforming gene protein (PTTG) mRNA |
| CGGAAGAAAT count=9 | |
| AF170920 | Trailer AAAGGC, Position 776 Mus musculus heat shock protein (HSPC030) mRNA |
| GATGAGAATA count=9 | |
| AF036898 | Trailer TATGAA, Position 1584 Mus musculus DNA polymerase epsilon small subunit mRNA |
| TACATGTGGG count=9 | |
| M63836 | Trailer GAAAAA, Position 2407 Mouse beta-glucoronidase (Gus-s) mRNA |
| M28541 | Trailer GAAAAA, Position 2407 Mouse beta-glucoronidase (Gus-s) mRNA |
| M28540 | Trailer GAAAAA, Position 2407 Mouse beta-glucoronidase (Gus-s) mRNA |
| M19279 | Trailer GAAAAA, Position 2406 Mouse beta-glucuronidase (Gus-s-a allele) mRNA |
| J03047 | Trailer GAAAAA, Position 2407 Mouse beta-glucuronidase mRNA |
| TACTTAAAAA count=9 | |
| X62940 | Trailer CTGCTT, Position 1399 M.musculus TSC-22 mRNA. |
| TAGTTCTATC count=9 | |
| AB028895 | Trailer AAATAC, Position 2674 Mus musculus mRNA for cell-surface sialomucin MGC-24 |
| TATTAAAGAA count=9 | |
| U31758 | Trailer ACAATT, Position 1885 Mus musculus transcriptional regulator RPD3 homolog mRNA |
| TATTGAGCCC count=9 | |
| D87909 | Trailer CCTCTC, Position 822 Mus musculus mRNA for PA28 alpha subunit |
| TCAACTGACT count=9 | |
| U30840 | Trailer CCTTTT, Position 1610 Mus musculus voltage dependent anion channel 1 mRNA |
| TGATGTATGC count=9 | |
| M13441 | Trailer CAAGCG, Position 1229 Mouse alpha-tubulin isotype M-alpha-6 mRNA |
| TGTGGATGGG count=9 | |
| AF033114 | Trailer AAGGCG, Position 443 Mus musculus strain C57BL/6J Siva-1 mRNA |
| AF033113 | Trailer AAGGCG, Position 356 Mus musculus Siva-1 mRNA |
| AF033112 | Trailer AAGGCG, Position 161 Mus musculus Siva-2 mRNA |
| TGTTCATACA count=9 | |
| AF231925 | Trailer TTTTTG, Position 3204 Mus musculus COPI coatomer complex |
| TTATATTAAA count=9 | |
| M25944 | Trailer GAAAAA, Position 517 Mouse carbonic anhydrase II (CAII) mRNA |
| K00811 | Trailer GAAAAA, Position 1265 Mouse carbonic anhydrase isozyme II mRNA |
| U37706 | Trailer GAAAAA, Position 460 Mus musculus carbonic anhydrase II (Car2) mRNA |
| TTGCACCCCA count=9 | |
| AB021122 | Trailer AACTGG, Position 989 Mus musculus Tim23 mRNA for translocase of inner mitochondrial |
| TTGTTGGAGG count=9 | |
| AF118650 | Trailer ATTGGA, Position 958 Mus musculus PKCq-interacting protein PICOT (PICOT) mRNA |
| TTTGTGATGG count=9 | |
| AJ007972 | Trailer AATAAA, Position 3270 Mus musculus mRNA for GTPI protein. |
| AATGGATTGT count=8 | |
| AB041664 | Trailer TTTTAA, Position 1434 Mus musculus brain cDNA |
| ACAAAGTTGG count=8 | |
| D84096 | Trailer TTT , Position 3220 Mouse mRNA for ubiquitin carboxyl-terminal hydrolase (UBP) |
| ACATAAAACA count=8 | |
| AF234625 | Trailer GATTTG, Position 1908 Mus musculus pre-B-cell colony-enhancing factor mRNA |
| ACTCCTTTTG count=8 | |
| M16229 | Trailer AGGAAA, Position 967 Mouse mitochondrial malate dehydrogenase (mMDH) mRNA |
| AGAAATGCTA count=8 | |
| AF249870 | Trailer GAATAA, Position 806 Mus musculus p53 apoptosis-associated target (Perp) mRNA |
| AGGAGTTCAA count=8 | |
| AB016257 | Trailer GGTCAT, Position 1888 Mus musculus mRNA for OCTN1 |
| AGGTAACTGC count=8 | |
| U64450 | Trailer TTGCTA, Position 542 Mus musculus nucleophosmin/nucleoplasmin-3 (Npm3) mRNA |
| ATAAAAGTTC count=8 | |
| AF169300 | Trailer TATTAC, Position 2678 Mus musculus ring finger protein 4 (Rnf4) mRNA |
| ATGGCAAAGG count=8 | |
| U39302 | Trailer ATGACC, Position 1157 Mus musculus 26S proteasome subunit 4 ATPase mRNA |
| CAGAGGCAGG count=8 | |
| M89797 | Trailer TGCAGA, Position 192 Mouse Wnt-4 mRNA |
| CAGTCCATTC count=8 | |
| U95114 | Trailer AGCAGT, Position 427 Mus musculus fertilization antigen-1 mRNA |
| CCAAATTTGA count=8 | |
| U77128 | Trailer AGTCAT, Position 296 Mus musculus mitochondrial ATP synthase coupling factor 6 mRNA |
| CCAACACAGC count=8 | |
| AJ272019 | Trailer GATATG, Position 417 Mus musculus mRNA for 20S proteasome subunit C2 (Psma1 gene). |
| AF060088 | Trailer GATATG, Position 388 Mus musculus proteasome subunit C2 (Psma1) mRNA |
| CCAGGAAAGT count=8 | |
| AF033353 | Trailer TCTAAT, Position 1014 Mus musculus ubiquitin-homology domain protein (Ubl1) mRNA |
| CCCACCAGCC count=8 | |
| AF106967 | Trailer ACCCCC, Position 216 Mus musculus I3 protein mRNA |
| CGGATTGGAG count=8 | |
| D31717 | Trailer CCAATG, Position 1691 Mouse MARib mRNA for ribophorin |
| CTAACCTAAG count=8 | |
| M32017 | Trailer ATGCCT, Position 960 Mouse lysosomal membrane glycoprotein type B (lgp-B) mRNA |
| J05287 | Trailer ATGCCT, Position 1600 Mouse lysosomal membrane glycoprotein (LAMP-2) mRNA |
| CTCAACTCCT count=8 | |
| AF221713 | Trailer GCACAG, Position 2466 Mus musculus huntingtin interacting protein 1 related mRNA |
| CTGAGGACAG count=8 | |
| X15487 | Trailer GAGAGG, Position 1533 Mouse mRNA for syndecan |
| CTGTAATTAT count=8 | |
| AJ132616 | Trailer AGTCTC, Position 811 Mus musculus mRNA for HIRA-interacting protein (HIRIP5). |
| CTTAGGTTTT count=8 | |
| L31958 | Trailer AACCCC, Position 668 Mus musculus (clone: pMAT1) mRNA |
| GAGCGCATGG count=8 | |
| M12573 | Trailer TGCAGG, Position 300 Mouse heat shock protein (hsp68) mRNA |
| M12572 | Trailer TGCAGG, Position 417 Mouse heat shock protein (hsp68) mRNA |
| M12571 | Trailer TGCAGG, Position 879 Mouse heat shock protein (hsp68) mRNA |
| TCAGGAGACT count=8 | |
| AJ242954 | Trailer TCACCA, Position 4943 Mus musculus partial mRNA for dysferlin (dysf gene). |
| TCTAGCAAAT count=8 | |
| AF077002 | Trailer CCAGGT, Position 1183 Mus musculus 14-3-3 ETA mRNA |
| TGGCGCCCTC count=8 | |
| D10084 | Trailer TTCTGG, Position 160 Mus musculus aberrant mRNA for complement component C4. |
| TGTGAGGAGT count=8 | |
| U58888 | Trailer CGTTGT, Position 891 Mus musculus SH3-containing protein SH3P2 mRNA |
| TGTTTGAAAA count=8 | |
| M36830 | Trailer CAAA , Position 1024 Mouse heat-shock protein hsp86 mRNA. |
| TTGTCTGTGG count=8 | |
| D14077 | Trailer ACTGTT, Position 1009 Mouse mRNA for sulfated glycoprotein-2 |
| L08235 | Trailer ACTGTT, Position 981 Mus musculus clusterin mRNA |
| L05670 | Trailer ACTGTT, Position 1009 Mus musculus alpha-clustrin and beta-clustrin mRNA |
| AF248058 | Trailer ACTGTT, Position 705 Mus musculus sulfated glycoprotein-2 isoform 2 mRNA |
| AF248057 | Trailer ACTGTT, Position 1034 Mus musculus sulfated glycoprotein-2 isoform 1 mRNA |
| TTTGAAATGC count=8 | |
| U62483 | Trailer ATCTTT, Position 2340 Mus musculus ubiquitin conjugating enzyme (ubc4) mRNA |
| TTTTGGGAGA count=8 | |
| Y09234 | Trailer GGAAGA, Position 2335 M.musculus mRNA for kinase-like protein MSTK2S |
| AJ223071 | Trailer GGAAGA, Position 2479 Mus musculus mRNA for serine/threonine kinase protein |
| AAACAGCTGT count=7 | |
| U90123 | Trailer ACCTCA, Position 1007 Mus musculus HN1 (Hn1) mRNA |
| AAACGTGGCT count=7 | |
| M61007 | Trailer GAGCGC, Position 1108 Mouse alpha-1-acid glycoprotein (AGP/EBP) mRNA |
| X62600 | Trailer GAGCGC, Position 1199 M.musculus mRNA for C/EBP beta. |
| AAAGAGCACA count=7 | |
| AF042822 | Trailer CTGGGG, Position 2606 Mus musculus epithin mRNA |
| AAATATGTGG count=7 | |
| U50631 | Trailer AGATTT, Position 1019 Mus musculus heat-responsive protein (HRP12) mRNA |
| AAGCGGGAGG count=7 | |
| D29919 | Trailer AGAAAG, Position 31 Mouse mRNA for mouse transcription factor kA1 (A7) containing |
| D16631 | Trailer AGAAAG, Position 328 Mouse mRNA for transcription factor A1 |
| X17500 | Trailer AGAAAG, Position 381 Mouse mRNA for putative transcription factor of the insulin gene |
| AAGGAGGTAG count=7 | |
| AF030343 | Trailer ATATGG, Position 602 Mus musculus peroxisomal/mitochondrial dienoyl-CoA isomerase ECH1p |
| ACAATGAAGC count=7 | |
| L10426 | Trailer AAAAAA, Position 2479 Mus musculus ets-related protein 81 (ER81) mRNA |
| ACCCCCAATT count=7 | |
| X54966 | Trailer GTATGG, Position 707 M.musculus ctsB gene (3' end) for cathepsin B. |
| ACTGACTCTT count=7 | |
| Y14196 | Trailer GGTCAA, Position 1560 Mus musculus mRNA for heterogeneous nuclear ribonucleoprotein H. |
| ACTGTGCGCC count=7 | |
| AB000713 | Trailer CCCTCC, Position 1522 Mus musculus mCPE-R mRNA for CPE-receptor |
| AGTGCCTTTG count=7 | |
| X80638 | Trailer GCTACC, Position 490 M.musculus rhoC mRNA. |
| AGTTTGCTCA count=7 | |
| AF093671 | Trailer C , Position 1095 Mus musculus peroxisomal biogenesis factor (Pex11b) mRNA |
| ATACCAAGAG count=7 | |
| AF182040 | Trailer GTGAGG, Position 1460 Mus musculus LAG protein (Lag) mRNA |
| ATGCTAGCTA count=7 | |
| AF153197 | Trailer TGTTCT, Position 1581 Mus musculus lipotransin mRNA |
| ATTGTCACTG count=7 | |
| M88694 | Trailer ACTACA, Position 251 Mus musculus thioether S-methyltransferase mRNA |
| CAGGCGGCCA count=7 | |
| D90362 | Trailer AGAACT, Position 2517 Mouse mRNA for cadherin-associated protein (CAP102/alpha catenin). |
| X59990 | Trailer AGAACT, Position 2526 M.musculus alpha-catenin gene for alpha-catenin. |
| CCACATCCCA count=7 | |
| L32973 | Trailer TTTCTT, Position 2902 Mouse thymidylate kinase homologue mRNA |
| CCACCTCATC count=7 | |
| X53476 | Trailer TCATTT, Position 449 Mouse mRNA for non-histone chromosomal protein HMG-14. |
| CCACCTCCCC count=7 | |
| U70315 | Trailer CCAGTC, Position 272 Mus musculus U1 snRNP-specific protein C mRNA |
| X96767 | Trailer CCAGTC, Position 259 M.musculus mRNA for U1 snRNP-specific protein C. |
| CCATACAATG count=7 | |
| M64641 | Trailer CCGCCC, Position 1393 Mouse Mov-34 protein mRNA |
| CCCAGCCACA count=7 | |
| AF018262 | Trailer GAATGG, Position 1234 Mus musculus protein phosphatase 5 (PP5) mRNA |
| CCCCCACCCC count=7 | |
| D87901 | Trailer ACC , Position 1091 Mouse mRNA for ARF4 |
| CCTAGAGCCA count=7 | |
| AF171080 | Trailer GCACAT, Position 1342 Mus musculus histone macroH2A1.2 variant mRNA |
| AF123312 | Trailer GCACAT, Position 315 Mus musculus core histone MacroH2A.1 mRNA |
| CCTCTGGTGA count=7 | |
| AF053232 | Trailer CTCCAC, Position 1366 Mus musculus SIK similar protein mRNA |
| CCTGTTCCCC count=7 | |
| AB012865 | Trailer TGAGAA, Position 619 Mus musculus mRNA for C184S protein |
| CCTTTTCCAT count=7 | |
| X81444 | Trailer TCTGGA, Position 80 M.musculus SIG-111 mRNA. |
| AF023483 | Trailer TCTGGA, Position 1061 Mus musculus HS-1-associating protein HAX-1L (mHAX-1s) pseudogene |
| AF023482 | Trailer TCTGGA, Position 898 Mus musculus HS1-associating protein (mHAX-1s) mRNA |
| CGGCAGAAGG count=7 | |
| U85489 | Trailer ATGAGG, Position 1145 Mus musculus Ah receptor-interacting protein (AIP) mRNA |
| CTGGACATCA count=7 | |
| AB033123 | Trailer CTGATA, Position 1834 Mus musculus CtBP2 mRNA for C-terminal binding protein 2 |
| CTTGCAATAC count=7 | |
| AB041651 | Trailer CCTGTG, Position 1362 Mus musculus brain cDNA |
| GAAGAGCAGA count=7 | |
| AF039840 | Trailer CCCTTC, Position 2092 Mus musculus mitogen-activated protein kinase-activated protein |
| GGTGCTGTCA count=7 | |
| X57277 | Trailer AATACC, Position 584 M.musculus rac1 gene. |
| GTGAAGCACC count=7 | |
| X60672 | Trailer TGAATT, Position 3352 M.musculus mRNA for radixin. |
| GTGGAGATGC count=7 | |
| AF220501 | Trailer TGGTGC, Position 411 Mus musculus PPARgamma cofactor 2 (Pgc2) mRNA |
| AF106473 | Trailer TGGTGC, Position 407 Mus musculus leucine-rich-domain inter-acting protein 1 (Leap1) |
| GTTTTTTTTT count=7 | |
| AF043257 | Trailer CTATGA, Position 2926 Mus musculus beta5B integrin mRNA |
| AF043256 | Trailer CTATGA, Position 2955 Mus musculus beta5A integrin mRNA |
| AF022110 | Trailer CTATGA, Position 3049 Mus musculus integrin beta-5 mRNA |
| TACCACCCTA count=7 | |
| X97042 | Trailer ACATCG, Position 250 Mus musculus mRNA for UBcM4 protein. |
| AJ130961 | Trailer ACATCG, Position 239 Mus musculus mRNA for ubiquitin-conjugating enzyme. |
| TACTAATCCT count=7 | |
| M24786 | Trailer TATATT, Position 251 Mouse anti-idotype immunoglobulin heavy chain variable |
| TATCCTAGCC count=7 | |
| AF129888 | Trailer GGGAGG, Position 987 Mus musculus Sui1 homolog mRNA |
| TATTTAAGAG count=7 | |
| AF049890 | Trailer TTTAAT, Position 1643 Mus musculus tyrosylprotein sulfotransferase-2 mRNA |
| TCACATTTTG count=7 | |
| U62545 | Trailer AGAAAC, Position 282 Mus musculus FK506-binding protein 25 homolog (mFKBP25) mRNA |
| AF135595 | Trailer AGAAAC, Position 803 Mus musculus 25 kDa FK506 binding protein FKBP25 (Fkbp25) mRNA |
| AF110812 | Trailer AGAAAC, Position 796 Mus musculus 25 kDa FK506-binding protein (Fkbp25) mRNA |
| TCATTACAGA count=7 | |
| M24560 | Trailer TGGTTG, Position 2635 Mouse tyrosinase (tyr1) mRNA |
| M30379 | Trailer TGGTTG, Position 74 Mouse MHC class I mRNA containing an Alu-type II repeat element. |
| TCCATTTGGG count=7 | |
| M74227 | Trailer TGACCC, Position 1114 Mouse cyclophilin C (cyp C) mRNA |
| TCCCCACCAC count=7 | |
| AF040945 | Trailer CCCAGG, Position 1767 Mus musculus cell fate specification homolog MAB21L1 (Mab21l1) |
| TGGATTTAAT count=7 | |
| D87902 | Trailer TTGGTT, Position 858 Mouse mRNA for ARF5 |
| TGGGGTAGAT count=7 | |
| M92988 | Trailer TCTGAT, Position 1440 Mouse calregulin (ERp60) mRNA |
| TGGTATGAAC count=7 | |
| U51167 | Trailer ATCGGC, Position 1085 Mus musculus isocitrate dehydrogenase mRNA |
| TGTTTGGCTG count=7 | |
| AB025582 | Trailer TGAGGT, Position 355 Mus musculus mRNA for proliferation related acidic leucine rich |
| TTCAACCCTA count=7 | |
| M58566 | Trailer TCTTAA, Position 2325 Mouse TIS11 primary response gene |
| AF037260 | Trailer GGGACC, Position 3999 Mus musculus non-receptor protein tyrosine kinase Ack mRNA |
| AF267535 | Trailer TGCCGT, Position 1503 Mus musculus CUG-binding protein LYLQ isoform mRNA |
| TTGAGAAGAG count=7 | |
| L76092 | Trailer GGCCGC, Position 195 Mus musculus p19 ARF protein mRNA |
| TTGAGAGAAG count=7 | |
| AF039663 | Trailer GAACTG, Position 3546 Mus musculus AC133 antigen homolog mRNA |
| AF026269 | Trailer GAACTG, Position 3472 Mus musculus prominin mRNA |
| TTTGTATCGA count=7 | |
| AF140599 | Trailer ATGTCA, Position 168 Mus musculus ring-box protein 1 (Rbx1) mRNA |
| AAAAAACATG count=6 | |
| AF060093 | Trailer AAGAGG, Position 762 Mus musculus proteasome subunit C9 (Psma4) mRNA |
| AACCTCATTT count=6 | |
| AF269151 | Trailer ATTTAT, Position 2478 Mus musculus transmembrane protein TM9SF3 (Tm9sf3) mRNA |
| AACTCTTTGT count=6 | |
| U72141 | Trailer TTTGGC, Position 2796 Mus musculus multiple exostoses 2 protein (EXT2) mRNA |
| U67837 | Trailer TTTGGC, Position 2792 Mus musculus multiple exostosis protein (EXT2) mRNA |
| AAGAAGCCAC count=6 | |
| D38379 | Trailer GCCCCA, Position 1031 Mouse mRNA for pyrubate kinase M. |
| X97047 | Trailer GCCCCA, Position 1008 M.musculus mRNA for M2-type pyruvate kinase. |
| AAGAATAAGA count=6 | |
| M29462 | Trailer CCTGGA, Position 954 Mouse malate dehydrogenase mRNA |
| AAGACAAGTG count=6 | |
| J02623 | Trailer , Position 1952 Mouse cytosolic aspartate aminotransferase isoenzyme mRNA |
| AAGCTACAGA count=6 | |
| AF035646 | Trailer TATGGG, Position 412 Mus musculus small GTPase Rab10 (Rab10) mRNA |
| AAGGTCCACT count=6 | |
| U29530 | Trailer TAGTGG, Position 254 Mus musculus clone TA-9 ATP synthase b chain homolog mRNA |
| AAGGTCTCCA count=6 | |
| AF031568 | Trailer TGCAAA, Position 1332 Mus musculus heterogeneous nuclear ribonucleoprotein G (Hnrnpg) |
| ACAGCAGAGA count=6 | |
| Y15128 | Trailer TGGCCA, Position 2174 Mus musculus mRNA for novel leucine zipper protein |
| AF141294 | Trailer TGGCCA, Position 3694 Mus musculus bamacan (Bam) mRNA |
| AF047601 | Trailer TGGCCA, Position 3671 Mus musculus SMCD (SmcD) mRNA |
| ACAGCAGTAA count=6 | |
| AB041555 | Trailer ATGTGA, Position 1903 Mus musculus brain cDNA |
| ACAGTGCGTG count=6 | |
| AF076156 | Trailer CCTGGC, Position 1181 Mus musculus catechol-O-methyltransferase (Comt) mRNA |
| ACATAAAACT count=6 | |
| X63535 | Trailer TTTGTC, Position 4032 M.musculus ufo mRNA. |
| ACCAAACACA count=6 | |
| J00409 | Trailer AGTGGG, Position 237 Mouse MHC class I H2 gene (haplotype k) |
| M13200 | Trailer AGTGGG, Position 150 Mouse MHC class I H2-K-alpha-2 gene (haplotype bm9) |
| M18631 | Trailer AGTGGG, Position 18 Mouse MHC class I mutant H-2Kkml mRNA. |
| M34932 | Trailer AGTGGG, Position 423 Mouse MHC class I H-2K-kml mRNA (H-2K-kml haplotype) |
| U55818 | Trailer AGTGGG, Position 159 Mus musculus MHC class I antigen H-2K (H-2K) mRNA |
| U55817 | Trailer AGTGGG, Position 159 Mus musculus MHC class I antigen H-2D (H-2D) mRNA |
| ACCAACCACC count=6 | |
| AF072248 | Trailer CCAGCA, Position 590 Mus musculus methyl-CpG binding domain-containing protein MBD3 |
| ACCATGGCAA count=6 | |
| L38444 | Trailer AGGCTT, Position 1484 Mus musculus (clone U2) T-cell specific protein mRNA |
| U15636 | Trailer AGGCTT, Position 1490 Mus musculus GTP binding protein (GTP2) mRNA |
| ACCCCACAGT count=6 | |
| AF015309 | Trailer GAGGCG, Position 1534 Mus musculus nucleolar protein (MSP58) mRNA |
| ACTTCCTCGG count=6 | |
| X65021 | Trailer ATATTT, Position 874 M.musculus mRNA for glutathione S-transferase. |
| AGAAGCTGGA count=6 | |
| D42068 | Trailer GGGTGT, Position 1750 Mouse mRNA for syntaxin binding protein muSec1 |
| U19520 | Trailer GGGTGT, Position 1772 Mus musculus vesicle transport protein (munc-18b) mRNA |
| AF263345 | Trailer GGGTGT, Position 1765 Mus musculus syntaxin binding protein Munc18-2 (Stxbp2) mRNA |
| AGGTAGAGAG count=6 | |
| AF063847 | Trailer AGCTTG, Position 706 Mus musculus Smt3A protein mRNA |
| ATATCGAAGC count=6 | |
| L00993 | Trailer TCTGTT, Position 1924 Mus musculus autoantigen La (SS-B) mRNA |
| ATGAAGGTGG count=6 | |
| M18091 | Trailer TTTTCC, Position 28 Mouse U1b-2 small nuclear RNA (uRNA). |
| ATGCAGCAGA count=6 | |
| AF073297 | Trailer AGCAGA, Position 144 Mus musculus small EDRK-rich factor 2 (Serf2) mRNA |
| ATGTCTATGC count=6 | |
| AB021743 | Trailer TATCCG, Position 1357 Mus musculus mRNA for PR65 (type 2A serine/threonine protein |
| ATTAAGAAAG count=6 | |
| U30292 | Trailer AAAGAA, Position 2795 Mus musculus collagen type XIII alpha-1 chain mRNA |
| ATTGAGAGCA count=6 | |
| AF078840 | Trailer AGCGAG, Position 601 Mus musculus 5'(3')-deoxyribonucleotidase (Nt) mRNA |
| ATTTTGTAAA count=6 | |
| D50463 | Trailer GTACAG, Position 1241 Mouse SDR1 mRNA |
| CAAAGTTGGC count=6 | |
| U94402 | Trailer CAGCAT, Position 1045 Mus musculus ubiquitin conjugating enzyme UBC9 mRNA |
| CAACACAGCT count=6 | |
| AB028863 | Trailer CCCAGT, Position 690 Mus musculus mRNA for MMRP19 |
| CACCCACCTC count=6 | |
| U81823 | Trailer TGTTAC, Position 1287 Mus musculus p38delta MAP kinase mRNA |
| CACGAAGGTG count=6 | |
| D17571 | Trailer GTGCCC, Position 1909 Mouse mRNA for NADPH-cytochrome P450 oxidoreductase |
| CAGGACCTGG count=6 | |
| AF168675 | Trailer TAGCAA, Position 960 Mus musculus TNF intracellular domain-interacting protein mRNA |
| CAGTTTTGGG count=6 | |
| U97170 | Trailer AAAGGA, Position 954 Mus musculus protein kinase inhibitor gamma (PKIg) mRNA |
| CCAGGTAATT count=6 | |
| AF031903 | Trailer AGTATA, Position 1147 Mus musculus ADP-ribosylation-like factor homolog ARL6 (Arl6) mRNA |
| CCTACCGCCA count=6 | |
| AB030201 | Trailer GCTGCG, Position 500 Mus musculus mRNA |
| CCTTACTGGG count=6 | |
| X70067 | Trailer TACAGC, Position 1188 M.musculus RNPS1 mRNA for RNA/DNA-binding protein. |
| CGAGATATAC count=6 | |
| U20532 | Trailer GCAGGA, Position 1716 Mus musculus p45 NF-E2 related factor 2 (Nrf 2) mRNA |
| CGCACCGGCC count=6 | |
| D14485 | Trailer TCCCCG, Position 82 Mouse mRNA for dbpA murine homologue |
| CTACTAATAA count=6 | |
| M83741 | Trailer AACAAG, Position 649 Mouse cofactor mRNA. |
| CTCACCGTGG count=6 | |
| U05809 | Trailer AGGACC, Position 1756 Mus musculus LAF1 transketolase mRNA |
| CTCACCTTTG count=6 | |
| L04128 | Trailer ACCAGC, Position 383 Mus musculus ribosomal protein L18 (rpL18) mRNA |
| CTCCAGCAGA count=6 | |
| U52523 | Trailer GTGGAC, Position 1396 Mus musculus protein tyrosine phosphatase FLP1 mRNA |
| U35124 | Trailer GTGGAC, Position 1385 Mus musculus nonreceptor protein tyrosine phosphatase (PTPK1) mRNA |
| U49853 | Trailer GTGGAC, Position 1351 Mus musculus protein tyrosine phosphatase mRNA |
| CTGAGTTCAA count=6 | |
| U93277 | Trailer TTCCCA, Position 2746 Mus musculus 8S-lipoxygenase mRNA |
| U51992 | Trailer ATCCCA, Position 1836 Mus musculus interferon stimulated gene factor 3 gamma mRNA |
| Y14696 | Trailer TTCCCA, Position 2760 Mus musculus mRNA for arachidonate 8(S)-lipoxygenase. |
| CTGTGAAGAA count=6 | |
| L36663 | Trailer AGTTCT, Position 828 Mus musculus CArG box-binding factor mRNA |
| CTTGGTAACT count=6 | |
| AB016490 | Trailer TTGTAG, Position 955 Mus musculus mJTB mRNA |
| CTTTTGACAA count=6 | |
| M76131 | Trailer CAGCAG, Position 697 Mouse elongation factor 2 (ef-2) mRNA |
| GGCTGTGACA count=6 | |
| AF149820 | Trailer ACGACG, Position 669 Mus musculus p33ING1 protein mRNA |
| GGGAGCTGAG count=6 | |
| M30856 | Trailer ATGGTG, Position 1244 Mouse interleukin 2 receptor mRNA |
| GGGGCCGCTG count=6 | |
| AF208026 | Trailer GTGCTC, Position 3152 Mus musculus OTRPC4 cation channel mRNA |
| GTTCCCCCCT count=6 | |
| U55060 | Trailer CTGTGG, Position 1260 Mus musculus beta-galactoside binding lectin mRNA |
| GTTTCCCTTG count=6 | |
| AB025349 | Trailer CATGCC, Position 501 Mus musculus L2BP1/BAF mRNA for LAP2 binding protein 1 |
| GTTTGGTTTT count=6 | |
| X58069 | Trailer GTTTTT, Position 1338 Mouse mRNA for Histone H2A.X. |
| TAACCATTTT count=6 | |
| U35833 | Trailer CATACT, Position 2247 Mus musculus anthracycline-associated resistance (Arx) mRNA |
| TACAGTTTTA count=6 | |
| U83176 | Trailer TCATCT, Position 1908 Mus musculus ROSA 26 transcription AS ROSA26AS mRNA |
| TACATCACAC count=6 | |
| AB038243 | Trailer TCTACA, Position 204 Mus musculus mRNA for Arp2/3 complex subunit p21-Arc |
| TACGCACGCA count=6 | |
| U81491 | Trailer TCAGCA, Position 2576 Mus musculus polyhomeotic (mPh2) mRNA |
| AF060076 | Trailer TCAGCA, Position 1265 Mus musculus polyhomeotic 2 protein (Mph2) mRNA |
| TATATATGTG count=6 | |
| AF079974 | Trailer AACATT, Position 2716 Mus musculus Rac GTPase-activating protein mRNA |
| AB030252 | Trailer AACATT, Position 2758 Mus musculus MgcRacGAP mRNA for GTPase activating protein |
| TCACAGCCAG count=6 | |
| X59728 | Trailer TTCTGT, Position 72 M.musculus mRNA for gas5 growth arrest specific protein. |
| TCAGGCTGAG count=6 | |
| Y08219 | Trailer CAAAAT, Position 961 M.musculus mRNA for cp27 gene. |
| AB010828 | Trailer CAAAAT, Position 962 Mus musculus mRNA for BCNT |
| TCGGACGCTC count=6 | |
| D17341 | Trailer AGTGGG, Position 485 Mus musculus mRNA for male-enhanced antigen (Mea) |
| L10401 | Trailer AGTGGG, Position 530 Mus musculus male-enhanced antigen (Mea) mRNA |
| M27938 | Trailer AGTGGG, Position 530 Mouse male-enhanced antigen mRNA (Mea) |
| TCTACTGGCA count=6 | |
| U63648 | Trailer GGCCAT, Position 3415 Mus musculus p160 myb-binding protein (P160) mRNA |
| TCTTTCATTG count=6 | |
| AF096285 | Trailer TACAAG, Position 1549 Mus musculus serine-threonine kinase receptor-associated protein |
| TCTTTTCAGA count=6 | |
| AF272044 | Trailer AGTGTC, Position 1867 Mus musculus BRI3 mRNA |
| AB030199 | Trailer AGTGTC, Position 1903 Mus musculus mRNA |
| TGGGAGCAGG count=6 | |
| AJ005790 | Trailer AGAATA, Position 1402 Mus musculus mRNA for PKL12 protein. |
| AF089869 | Trailer AGAATA, Position 1445 Mus musculus serine/threonine kinase 16 (Stk16) mRNA |
| AB022179 | Trailer AGAATA, Position 1400 Mus musculus mRNA for F5-2 |
| AB017197 | Trailer AGAATA, Position 1416 Mus musculus mRNA for EDPK |
| TGGGTTATGC count=6 | |
| D31788 | Trailer ATGACG, Position 661 Mouse mRNA for BST-1 |
| L32812 | Trailer ATGACG, Position 665 Mouse antigen (BP-3) mRNA |
| TGTCCTCTCA count=6 | |
| AF139659 | Trailer CGTGGG, Position 1094 Mus musculus origin recognition complex subunit 6 (Orc6) mRNA |
| TGTGTTGTCT count=6 | |
| Y17138 | Trailer AAAAGT, Position 4192 Mus musculus mRNA for mCASK-B. |
| TGTTTGTACT count=6 | |
| AB041652 | Trailer CTGTAT, Position 2242 Mus musculus brain cDNA |
| TTGGAAGAGA count=6 | |
| U44088 | Trailer AAAAGG, Position 1804 Mus musculus TDAG51 (TDAG51) mRNA |
| TTGGTCACAG count=6 | |
| AB035383 | Trailer , Position 1169 Mus musculus mRNA for SRp25 nuclear protein |
| TTGTGTGTTT count=6 | |
| M33975 | Trailer CCTGCT, Position 25 Mouse salivary protein 2 mRNA |
| AF128535 | Trailer GACAGT, Position 3190 Mus musculus cytoplasmic phosphoprotein PACSIN2 mRNA |
| TTTGTGGGAA count=6 | |
| U05343 | Trailer GTGGCA, Position 1391 Mus musculus Balb/c zinc finger protein PZF (Pzf) mRNA |
| AAAAAAAAAT count=5 | |
| AF099988 | Trailer AATAAT, Position 1891 Mus musculus Ste-20 related kinase SPAK mRNA |
| AAACTGAATG count=5 | |
| U02098 | Trailer AAACAC, Position 1483 Mus musculus Pur-alpha mRNA |
| AF017631 | Trailer AAACAC, Position 1008 Mus musculus purine-rich single-stranded DNA-binding protein alpha |
| AAATGAAGGC count=5 | |
| U25691 | Trailer TTCAAG, Position 1756 Mus musculus lymphocyte specific helicase mRNA |
| AACAAGAGCA count=5 | |
| AF202048 | Trailer CTGTAC, Position 1499 Mus musculus NM23-M7 (Nm23-M7) mRNA |
| AACCTGAGCG count=5 | |
| AB012580 | Trailer TGGAGA, Position 1530 Mus musculus mRNA for eIF3 p66 |
| AACTCTGTCA count=5 | |
| AF236064 | Trailer TTAATC, Position 669 Mus musculus VHSV-induced-like protein mRNA |
| AAGAAAGATG count=5 | |
| L76223 | Trailer AACAGG, Position 1243 Mus musculus 26S proteasome ATPase (CIP21) mRNA |
| AAGAAATGCA count=5 | |
| AF176910 | Trailer TTGATA, Position 2454 Mus musculus cullin 1 (Cul1) mRNA |
| AF136441 | Trailer TTGATA, Position 2414 Mus musculus cullin 1 (Cul1) mRNA |
| AF083216 | Trailer TTGATA, Position 2289 Mus musculus SCF complex protein cul-1 mRNA |
| AAGAAGGAGG count=5 | |
| AF062655 | Trailer TGGGAA, Position 2484 Mus musculus plenty-of-prolines-101 mRNA |
| AAGGAAGAGG count=5 | |
| AF062567 | Trailer AACCTG, Position 1479 Mus musculus transcription factor Sp3 mRNA |
| AAGGCCTTTC count=5 | |
| D30687 | Trailer TGTCCT, Position 616 Mouse mRNA for preadipocyte growth factor (glutathione |
| X53451 | Trailer TGTCCT, Position 575 Mouse mRNA for glutathione S-transferase II (EC 2.5.1.18). |
| AAGGGCGACA count=5 | |
| D63423 | Trailer CATCTG, Position 972 Mouse mRNA for annexin V |
| U29396 | Trailer CATCTG, Position 991 Mus musculus annexin V (Anx5) mRNA |
| AAGGTATGTA count=5 | |
| Z11664 | Trailer TGTTAT, Position 5102 M.musculus mRNA for son of sevenless 2. |
| AAGGTCCTAA count=5 | |
| M28723 | Trailer AATTTC, Position 1215 Mus musculus housekeeping-type protein (MER5) mRNA |
| AATGAAATGA count=5 | |
| AJ010045 | Trailer TTTCTT, Position 3221 Mus musculus mRNA for Rho guanine nucleotide-exchange factor |
| ACAACATCTT count=5 | |
| L08266 | Trailer TGTGTT, Position 2009 Mouse Facc mRNA |
| ACAAGGATGA count=5 | |
| AF006603 | Trailer CATTGA, Position 3742 Mus musculus histone deacetylase mHDA2 mRNA |
| ACACAAGTGT count=5 | |
| U17698 | Trailer GGGTTT, Position 2471 Mus musculus ablphilin-1 (abi-1) mRNA |
| ACACCATGAC count=5 | |
| AB041657 | Trailer TGTAGT, Position 1368 Mus musculus brain cDNA |
| ACACCATTCC count=5 | |
| AF077527 | Trailer TGAAGT, Position 928 Mus musculus syntenin mRNA |
| AF003693 | Trailer TGAAGT, Position 964 Mus musculus scaffold protein Pbp1 homolog mRNA |
| ACATGGCTGG count=5 | |
| L11564 | Trailer ATGTGA, Position 534 Mus musculus syndecan-1 (synd-1) mRNA |
| ACATTGTCTT count=5 | |
| U89345 | Trailer TGTTTC, Position 1129 Mus musculus cerebellar postnatal development protein-1 (Cpd1) |
| AB037685 | Trailer TGTTTC, Position 843 Mus musculus mLANP-L mRNA for LANP-like protein |
| ACCAATGCCT count=5 | |
| M13444 | Trailer GTTTTG, Position 899 Mouse alpha-tubulin isotype M-alpha-4 mRNA |
| AGAACCGTAT count=5 | |
| U24428 | Trailer ATTTGA, Position 598 Mus musculus mu-class glutathione s-transferase (mGSTM5) mRNA |
| AGAATTAAAT count=5 | |
| AF044222 | Trailer TTGTAT, Position 2476 Mus musculus HCG-1 protein (HCG-1) mRNA |
| AGACGTCACT count=5 | |
| AB041810 | Trailer GGAGTT, Position 664 Mus musculus brain cDNA |
| AGCACAGACA count=5 | |
| AB041615 | Trailer CCATTT, Position 1859 Mus musculus brain cDNA |
| AGCCAAGCCA count=5 | |
| AF112185 | Trailer GACTTG, Position 2353 Mus musculus epithelial sodium channel alpha subunit mRNA |
| AGCCTACTAA count=5 | |
| U66835 | Trailer TTAAAA, Position 290 Mus musculus unknown protein mRNA |
| AGCTGCTCAC count=5 | |
| AF093418 | Trailer GCTGAT, Position 1527 Mus musculus maleylacetoacetate isomerase mRNA |
| AGGAATCCAG count=5 | |
| U60593 | Trailer GCCAGG, Position 2762 Mus musculus cytoplasmic protein Ndr1 (Ndr1) mRNA |
| U52073 | Trailer GCCAGG, Position 2795 Mus musculus TDD5 mRNA |
| AGGAGCTGGA count=5 | |
| D86609 | Trailer GAGAAA, Position 137 Mouse mRNA for RPA16 |
| AGGCCTGAAC count=5 | |
| D85137 | Trailer CCGTCC, Position 1914 Mouse mRNA for PP1gamma |
| M27071 | Trailer CCGTCC, Position 1150 Mus musculus protein phosphatase type 1 (dis2m1) mRNA |
| U53456 | Trailer CCGTCC, Position 2006 Mus musculus protein phosphatase 1cgamma (PP1cgamma) mRNA |
| AGGGAAGTTC count=5 | |
| D49382 | Trailer ATTGTG, Position 2768 Mus musculus Nedd5 mRNA for septin |
| AGTGCCTGGC count=5 | |
| U42383 | Trailer GCCAGA, Position 1441 Mus musculus fibroblast growth factor inducible gene 13 (FIN13) |
| AGTGTTTAAA count=5 | |
| U07617 | Trailer TAAAAA, Position 2341 Mus musculus Grb2 adaptor protein (grb2) mRNA |
| D85748 | Trailer TAAAAA, Position 2216 Mouse mRNA for Grb3-3 |
| AGTTCAGACA count=5 | |
| U22015 | Trailer ACTGTG, Position 1894 Mus musculus retinoid X receptor interacting protein (RIP110) mRNA |
| ATAAACTCCT count=5 | |
| D14570 | Trailer TTTCTT, Position 2490 Mouse mRNA for PEBP2b3 protein |
| D14571 | Trailer TTTCTT, Position 2617 Mouse mRNA for PEBP2b2 protein |
| D14572 | Trailer TTTCTT, Position 2586 Mouse mRNA for PEBP2b1 protein |
| L03279 | Trailer TTTCTT, Position 2466 Mus musculus core-binding factor mRNA sequence. |
| L03305 | Trailer TTTCTT, Position 2277 Mus musculus core-binding factor mRNA sequence. |
| ATAAGAAAAA count=5 | |
| U66887 | Trailer TTACTT, Position 5051 Mus musculus DNA repair protein RAD50 (RAD50) mRNA |
| ATATGTGAAG count=5 | |
| U55061 | Trailer GTCACT, Position 936 Mus musculus beta-galactoside binding lectin intestine isoform |
| ATCATCACTT count=5 | |
| AF157500 | Trailer CGACTC, Position 1399 Mus musculus acid ceramidase mRNA |
| ATGCCGCCCC count=5 | |
| X53753 | Trailer TTAGTG, Position 1568 Mouse mRNA for nonmuscle tropomyosin 5. |
| ATTAACGGGA count=5 | |
| M55272 | Trailer GACTGT, Position 42 Mouse precursor 18S ribosomal RNA |
| CAACAAAGGT count=5 | |
| X55023 | Trailer TGTGAG, Position 1576 Mouse cDNA for heat shock protein 65. |
| X53584 | Trailer TGTGAG, Position 1504 Mouse mRNA for HSP60 protein (clones 3T3-7 |
| CAACCAACCT count=5 | |
| X74335 | Trailer CTGGCA, Position 594 M.musculus mRNA for desmoglein type 1. |
| CAAGACCAGG count=5 | |
| L22472 | Trailer GTGGCT, Position 453 Mouse Bax alpha mRNA |
| CAAGAGGATG count=5 | |
| AF106853 | Trailer ATGTGC, Position 527 Mus musculus beta-B1 crystallin mRNA |
| CACATGAGGA count=5 | |
| Y12474 | Trailer GATACT, Position 292 M.musculus mRNA for centrin gene. |
| CACCGGCCCT count=5 | |
| AF095905 | Trailer GGCACC, Position 657 Mus musculus CPETR2 (Cpetr2) mRNA |
| AF087821 | Trailer GGCACC, Position 602 Mus musculus claudin-3 mRNA |
| AB000715 | Trailer GGCACC, Position 14 Mus musculus mRVP1 mRNA |
| CACGGACACC count=5 | |
| AF193794 | Trailer AAGTTA, Position 313 Mus musculus vacuolar sorting protein VPS29 mRNA |
| CACTGCTGGA count=5 | |
| AF192558 | Trailer AGTACC, Position 1186 Mus musculus domesticus mitochondrial carrier homolog 1 isoform b |
| AF176007 | Trailer AGTACC, Position 1135 Mus musculus domesticus mitochondrial carrier homolog 1 isoform a |
| CAGCAGTTAA count=5 | |
| D78255 | Trailer AGCAGT, Position 578 Mouse mRNA for PAP-1 |
| CAGCGGGGCC count=5 | |
| AB030185 | Trailer GGCAGA, Position 292 Mus musculus mRNA |
| CAGGTGTGCT count=5 | |
| AB030200 | Trailer GAGTGG, Position 433 Mus musculus mRNA |
| CAGTTGTCAA count=5 | |
| D85904 | Trailer GACAAA, Position 2296 Mouse mRNA for apg-2 |
| CAGTTTCCTC count=5 | |
| U97149 | Trailer ACAAAT, Position 2598 Mus musculus MEP-1 (ep) mRNA |
| U78315 | Trailer ACAAAT, Position 2583 Mus musculus Hermansky-Pudlak syndrome protein homolog (Hps) mRNA |
| AF003866 | Trailer ACAAAT, Position 608 Mus musculus pale ear (ep wild type allele) mRNA |
| CATACTGTGA count=5 | |
| L10905 | Trailer CTCCCG, Position 41 Mus musculus (clone Gcap27) mRNA sequence. |
| AF187066 | Trailer CTCCCG, Position 572 Mus musculus p75NTR-associated cell death executor (Nade) mRNA |
| AF097440 | Trailer CTCCCG, Position 567 Mus musculus brain expressed X-linked protein 3 (Bex3) mRNA |
| CATCCAATGG count=5 | |
| X56502 | Trailer CTTACC, Position 694 Mouse CKII beta mRNA for casein kinase II beta subunit. |
| X52959 | Trailer CTTACC, Position 700 Mouse mRNA for casein kinase II beta subunit (EC 2.7.1.37). |
| CATCCCACTT count=5 | |
| X75415 | Trailer TATTGA, Position 1373 M.musculus mRNA for homeobox gene. |
| CATTTGTACC count=5 | |
| M63630 | Trailer AATAAA, Position 1639 Mus musculus predicted GTP binding protein (IRG-47) mRNA |
| CCTCTGTACA count=5 | |
| AF155373 | Trailer GCATCC, Position 2998 Mus musculus nuclear factor kappa B subunit p100 (Nfkb2) mRNA |
| AF155372 | Trailer GCATCC, Position 2961 Mus musculus nuclear factor kappa B subunit p100 (Nfkb2) mRNA |
| CGAGAAAACA count=5 | |
| Z71189 | Trailer TGGCCA, Position 1867 M.musculus mitochondrial mRNA for very-long-chain acyl-CoA |
| U41497 | Trailer TGGCCA, Position 828 Mus musculus very-long chain acyl-CoA dehydrogenase mRNA |
| AF017176 | Trailer TGGCCA, Position 1594 Mus musculus very-long-chain acyl-CoA dehydrogenase mRNA |
| CGCAGCCGCC count=5 | |
| AF087680 | Trailer TAACTG, Position 3076 Mus musculus valyl-tRNA synthetase (G7a) mRNA |
| CTACACACCT count=5 | |
| AF038848 | Trailer ACCAGA, Position 560 Mus musculus transcriptional repressor SIN3B (Sin3B) mRNA |
| CTCAAAAAAG count=5 | |
| X01023 | Trailer CCACCG, Position 1788 Mouse normal c-myc gene and translocated homologue from J558 |
| CTCAATAACC count=5 | |
| X57337 | Trailer TAAGCA, Position 1391 M.musculus CDNAp14 mRNA. |
| AB008548 | Trailer TAAGCA, Position 1350 Mus musculus mRNA for type 1 procollagen C-proteinase enhancer |
| CTCACAATAA count=5 | |
| AF026072 | Trailer ACTTAT, Position 1073 Mus musculus hydroxysteroid sulfotransferase (SULT2B) mRNA |
| CTGAATGACG count=5 | |
| AF118128 | Trailer TTCAGG, Position 1194 Mus musculus nuclear RNA helicase Bat1 mRNA |
| CTGCCTTAGG count=5 | |
| D67015 | Trailer GACTGG, Position 5286 Mouse mRNA for scg |
| CTGGTTCCCC count=5 | |
| AF079971 | Trailer ATTTGG, Position 1449 Mus musculus cytohesin-2 mRNA |
| CTGTGGTGGT count=5 | |
| D26177 | Trailer GGCAGG, Position 3036 Mouse mRNA for D-factor/LIF receptor |
| CTTAATATTT count=5 | |
| AF085348 | Trailer TGATTT, Position 1544 Mus musculus proline-rich protein (Bprp) mRNA |
| GATGAAGATG count=5 | |
| AF045462 | Trailer ATAAGG, Position 2378 Mus musculus female sterile homeotic-related protein Frg-1 mRNA |
| GCACTCGTGA count=5 | |
| AF176514 | Trailer GATTCT, Position 761 Mus musculus E2F1-inducible protein (Eig2) mRNA |
| GCCCTCTACA count=5 | |
| X80899 | Trailer TGGCCT, Position 323 M.musculus mRNA for cytochrome C oxidase subunit VII homologue. |
| GCTAAGTACA count=5 | |
| AF080253 | Trailer TGGAGT, Position 949 Mus musculus serine/threonine protein kinase 51PK(L) mRNA |
| AF080252 | Trailer TGGAGT, Position 908 Mus musculus serine/threonine protein kinase 51PK(S) mRNA |
| TAAACAAAAA count=5 | |
| X81464 | Trailer AAAAAA, Position 912 M.musculus mRNA for translin. |
| TACAAAGTGA count=5 | |
| AJ223293 | Trailer GTGCCA, Position 4190 Mus musculus mRNA for kinesin-related mitotic motor protein. |
| TACAATCATG count=5 | |
| AF056574 | Trailer CTTGAC, Position 3285 Mus musculus pyrroline-5-carboxylate synthetase short isoform mRNA |
| AF056573 | Trailer CTTGAC, Position 3291 Mus musculus pyrroline-5-carboxylate synthetase long isoform mRNA |
| TCAAAACCAA count=5 | |
| AF053550 | Trailer AACCAC, Position 1039 Mus musculus metaxin 2 (Mtx2) mRNA |
| AB041562 | Trailer AACCAC, Position 1058 Mus musculus brain cDNA |
| TCAATGAAGT count=5 | |
| AF100927 | Trailer AGCTAA, Position 1846 Mus musculus apoptosis-inducing factor AIF (Aif) mRNA |
| TCAGCAACCG count=5 | |
| AB026621 | Trailer TGGTAG, Position 2080 Mus musculus mRNA for RIE2 |
| TCATGTCTCT count=5 | |
| U48420 | Trailer GGAGGA, Position 627 Mus musculus liver glutathione transferase theta class type 2 mRNA |
| X98056 | Trailer GGAGGA, Position 496 M.musculus mRNA for glutathione S-transferase |
| TCCAACATTT count=5 | |
| L25913 | Trailer TGGAGG, Position 1497 Mus musculus chaperonin mRNA |
| Z31554 | Trailer TGGAGG, Position 1658 M.musculus (129/Sv) Cctd mRNA for CCT (chaperonin containing TCP-1) |
| TCGCTATAAT count=5 | |
| M63286 | Trailer AGTGAA, Position 1839 Mouse man 6-P receptor (46MPR) mRNA |
| X64068 | Trailer AGTGAA, Position 1934 M.musculus mRNA for cation-dependent mannose-6-phosphate receptor. |
| X64070 | Trailer AGTGAA, Position 9630 M.musculus gene for cation-dependent mannose-6-phosphate receptor. |
| TCGGGAGATT count=5 | |
| X70298 | Trailer GGCTGG, Position 1925 M.musculus sox-4 mRNA. |
| TCTAAAAAAA count=5 | |
| X78682 | Trailer AAA , Position 984 M.musculus mRNA for B-cell receptor associated protein (BAP) 32. |
| TCTCTCCTGA count=5 | |
| AF069502 | Trailer GCACTA, Position 1585 Mus musculus ubiquitin specific protease UBP43 mRNA |
| TGAGGAGCAG count=5 | |
| AF076607 | Trailer ATGATG, Position 2183 Mus musculus prediabetic NOD sera-reactive autoantigen mRNA |
| TGAGGCCTTG count=5 | |
| Z47088 | Trailer TTTTTT, Position 1051 M.musculus mRNA for RNA polymerase II elongation factor-like |
| TGATTTGCTA count=5 | |
| Y00094 | Trailer GTTCTT, Position 1185 Mouse mRNA for ras-related YPT1 protein. |
| TGCATGTCTT count=5 | |
| U17961 | Trailer CATTGA, Position 787 Mus musculus p62 mRNA |
| U17046 | Trailer CATTGA, Position 776 Mus musculus p62 ras-GAP associated phosphoprotein mRNA |
| TGCTGCAGCT count=5 | |
| U27455 | Trailer AAAGTA, Position 1618 Mus musculus serine palmitoyltransferase LCB2 subunit mRNA |
| X95642 | Trailer AAAGTA, Position 1621 M.musculus mRNA for serine palmitoyltransferase subunit B. |
| TGCTTCCCAT count=5 | |
| AF035962 | Trailer TGTGGT, Position 1208 Mus musculus MRJ (Mrj) mRNA |
| AB028854 | Trailer TGTGGT, Position 1210 Mus musculus mRNA for mDj4 |
| TGGACCTAAT count=5 | |
| U69898 | Trailer AAAACA, Position 1734 Mus musculus translocase of inner mitochondrial membrane (Tim44) |
| TGGAGCCCAC count=5 | |
| Y15799 | Trailer AGACCA, Position 1473 Mus musculus mRNA for G-protein coupled receptor kinase 6-A. |
| Y15798 | Trailer AGACCA, Position 1490 Mus musculus mRNA for G-protein coupled receptor kinase 6-B. |
| Y15797 | Trailer AGACCA, Position 1468 Mus musculus mRNA for G-protein coupled receptor kinase 6-C. |
| AF040749 | Trailer AGACCA, Position 1516 Mus musculus G protein-coupled receptor kinase 6 |
| AF040748 | Trailer AGACCA, Position 1516 Mus musculus G protein-coupled receptor kinase 6 |
| AF040747 | Trailer AGACCA, Position 1516 Mus musculus G protein-coupled receptor kinase 6 |
| TGGAGGAGAC count=5 | |
| U93242 | Trailer TGGTGG, Position 953 Mus musculus Ubc6p homolog mRNA |
| TGGGACCTTG count=5 | |
| AL355719 | Trailer ACGAGA, Position 469 Mus musculus mRNA full length insert cDNA clone EUROIMAGE 657748. |
| TGTAGGCAGA count=5 | |
| AB041607 | Trailer GCTCTG, Position 2595 Mus musculus brain cDNA |
| TGTATCTTAA count=5 | |
| X89998 | Trailer TAAAAA, Position 2433 M.musculus mRNA for 17 beta-hydroxysteroid dehydrogenase type IV. |
| TGTGCTATCT count=5 | |
| Z19543 | Trailer ATGCTC, Position 1183 M.musculus h2-calponin cDNA. |
| TGTGTGTTAT count=5 | |
| Y10874 | Trailer CAGCAA, Position 667 M.musculus mRNA for proteasome subunit MC14. |
| D83585 | Trailer CAGCAA, Position 653 Mouse mRNA for proteasome Z subunit |
| TTAAGAGATA count=5 | |
| AF209906 | Trailer ACATGA, Position 947 Mus musculus receptor activity modifying protein 2 mRNA |
| TTGCTATCAC count=5 | |
| D49744 | Trailer TGTAAC, Position 1559 Mouse mRNA for farnesyltransferase alpha subunit |
| TTGCTGTATT count=5 | |
| U27838 | Trailer GTTACT, Position 3106 Mus musculus glycosyl-phosphatidyl-inositol-anchored protein |
| U18773 | Trailer GTTACT, Position 1792 Mus musculus GPI-anchored protein p137 mRNA |
| TTGGCTTCCT count=5 | |
| X60203 | Trailer GGCTTT, Position 1367 M.musculus mRNA for FK506-binding protein. |
| TTGTGTCACT count=5 | |
| AF174296 | Trailer TCCAAA, Position 2388 Mus musculus GTPase RalB (RalB) mRNA |
| TTTTAGGATG count=5 | |
| AF062071 | Trailer TTTGGG, Position 844 Mus musculus zinc finger protein ZNF216 mRNA |
| TTTTTACAGT count=5 | |
| X89650 | Trailer ATCCAT, Position 1303 M.musculus mRNA for Rab7 protein. |
| AAAACAAGAC count=4 | |
| AF060490 | Trailer CCAGCT, Position 2591 Mus musculus TLS-associated protein TASR-2 mRNA |
| AB015894 | Trailer CCAGCT, Position 2563 Mus musculus mRNA for neural specific sr protein NSSR 1 |
| AAAAGAACAT count=4 | |
| AF217319 | Trailer CGAGGA, Position 1961 Mus musculus putative repair and recombination helicase RAD26L |
| AAAATGTGGT count=4 | |
| D55720 | Trailer GCCAGA, Position 1684 Mouse mRNA for nuclear pore-targeting complex |
| U34229 | Trailer GCCAGA, Position 1507 Mus musculus pendulin mRNA |
| U12270 | Trailer GCCAGA, Position 1622 Mus musculus pendulin (pendulin) mRNA |
| AAAGGTACGG count=4 | |
| AF114170 | Trailer GCGCTC, Position 1143 Mus musculus nucleotide-binding protein long form (Nubp1) mRNA |
| AACCTGAGGA count=4 | |
| Z54219 | Trailer AAATTG, Position 1029 M.musculus mRNA for mSUG1. |
| AAGAAGTAGC count=4 | |
| U52945 | Trailer TGAAGT, Position 867 Mus musculus tumor susceptibility protein TSG101 (tsg101) mRNA |
| X82319 | Trailer TGAAGT, Position 114 M.musculus CC2 mRNA. |
| AAGCAATCTG count=4 | |
| Z11997 | Trailer AACGTC, Position 1512 M.musculus mRNA for non-histone chromosomal high-mobility group 1 |
| AAGGACGAGG count=4 | |
| U85089 | Trailer ACCAGC, Position 501 Mus musculus thioredoxin mRNA |
| AATAAGATGG count=4 | |
| X81443 | Trailer AATGGT, Position 823 M.musculus SIG-92 mRNA. |
| Y15522 | Trailer AATGGT, Position 747 Mus musculus mRNA for MNUDC protein. |
| AATGCCTGGA count=4 | |
| M38337 | Trailer CGGCTC, Position 1101 Mouse milk fat globule membrane protein E8 mRNA |
| Y11684 | Trailer CGGCTC, Position 879 Mus musculus mRNA for mP47 protein |
| AB025280 | Trailer CGGCTC, Position 945 Mus musculus mRNA for milk fat globule glycoprotein MFG-E8 S |
| AB021130 | Trailer CGGCTC, Position 1056 Mus musculus mRNA for milk fat globule glycoprotein MFG-E8 long |
| AATGCTACTG count=4 | |
| U38940 | Trailer ACCCTT, Position 1721 Mus musculus asparagine synthetase mRNA |
| ACAAAAGAGG count=4 | |
| AB031387 | Trailer CTGTTG, Position 907 Mus musculus mRNA for Clast3 protein |
| ACAGACCCAG count=4 | |
| U34277 | Trailer AATTAG, Position 1420 Mus musculus PAF acetylhydrolase mRNA |
| ACCAGATGCT count=4 | |
| X91824 | Trailer GAGGCT, Position 508 M.musculus mRNA for SPRR1a protein. |
| ACCCCTCCTC count=4 | |
| M64298 | Trailer ATTCCA, Position 652 Mouse vacuolar H(+)-ATPase (mvp) mRNA |
| ACCTCTAGAC count=4 | |
| X17069 | Trailer AGCCCC, Position 1870 Mouse mRNA for protein with homology to transition protein 2 (TP2). |
| X70887 | Trailer AGCCCC, Position 1908 M.musculus mRNA for p59 immunophilin. |
| ACCTTTGCAT count=4 | |
| AF117887 | Trailer AGAAAA, Position 3085 Mus musculus protein arginine methyltransferase (Carm1) mRNA |
| ACGGTTTTCT count=4 | |
| AF181685 | Trailer CTGTAA, Position 2038 Mus musculus membrane protein TMS-2 mRNA |
| ACGTTCTGAT count=4 | |
| D86726 | Trailer TGAGCT, Position 2441 Mouse mRNA for mMIS5 |
| ACTCTGGCCG count=4 | |
| AF119149 | Trailer CTCTTC, Position 325 Mus musculus strain B6D2 F1/J filamin mRNA |
| ACTTTATTTG count=4 | |
| L16846 | Trailer CTAGGG, Position 1079 Mus musculus B-cell translocation gene-1 protein (BTG1) mRNA |
| AGAAGTTCAA count=4 | |
| U66058 | Trailer GGCTAA, Position 3474 Mus musculus DNA ligase III-alpha mRNA |
| AGCAAACTTA count=4 | |
| AF179566 | Trailer AGACAT, Position 3044 Mus musculus p130Cas-binding protein AND34-1 (And34) mRNA |
| AGCCACTTAG count=4 | |
| D88315 | Trailer AATTCA, Position 2113 Mouse mRNA for tetracycline transporter-like protein |
| AGCTTAAATT count=4 | |
| X92665 | Trailer TGTATA, Position 999 M.musculus mRNA for ubiquitin-conjugating enzyme UbcM3. |
| AGGACTTGGT count=4 | |
| X62154 | Trailer GAAGCT, Position 2478 M. musculus mRNA for P1 protein (P1.m). |
| AGGTAAGAAG count=4 | |
| AF112186 | Trailer TCTTGA, Position 2343 Mus musculus epithelial sodium channel beta subunit mRNA |
| AGTCAGCCCG count=4 | |
| AF161074 | Trailer GGCCAG, Position 145 Mus musculus TF-1 apoptosis related protein 19 (Tfar19) mRNA |
| AGTGGCTGTT count=4 | |
| U30838 | Trailer TTAAGA, Position 1364 Mus musculus voltage dependent anion channel 2 mRNA |
| AGTTAAAAAA count=4 | |
| AB041593 | Trailer AAAAAA, Position 2432 Mus musculus brain cDNA |
| AGTTTCTGTG count=4 | |
| L10106 | Trailer ACTGTA, Position 5683 Mus musculus protein tyrosine phosphate mRNA |
| AGTTTGCCCC count=4 | |
| AF225910 | Trailer TCCAGG, Position 954 Mus musculus DAZ-associated protein 1 (Dazap1) mRNA |
| AGTTTTTTAA count=4 | |
| AJ237586 | Trailer GAGATG, Position 2245 Mus musculus mRNA for hypothetical protein expressed in thymocytes |
| ATATACAGGA count=4 | |
| AB027012 | Trailer GCAGTA, Position 1093 Mus musculus galK mRNA for galactokinase |
| ATCAGTTAGA count=4 | |
| L41154 | Trailer AAGGGA, Position 670 Mus musculus SM22 alpha mRNA |
| U36588 | Trailer AAGGGA, Position 670 Mus musculus SM22 alpha mRNA |
| ATCATGGCAA count=4 | |
| Z37164 | Trailer AACCAG, Position 1654 M.musculus Cctq mRNA encoding cytosolic chaperone containing TCP-1 |
| ATCTTTTCTC count=4 | |
| X96618 | Trailer ATTTCG, Position 941 M.musculus mRNA for novel stromal cell protein. |
| ATGATGGAGA count=4 | |
| AB025407 | Trailer AGGTGA, Position 408 Mus musculus mRNA for sid2057p |
| ATGCAACAAA count=4 | |
| AF073517 | Trailer AGCAGA, Position 301 Mus musculus small EDRK-rich factor 1 (Serf1) mRNA |
| ATGTGAATAT count=4 | |
| U43900 | Trailer ATTTAA, Position 2059 Mus musculus signal transducing adaptor molecule STAM mRNA |
| ATTATAAAAA count=4 | |
| AB041566 | Trailer TCATAA, Position 890 Mus musculus brain cDNA |
| ATTTGGTGCT count=4 | |
| AF240783 | Trailer AAAACA, Position 2628 Mus musculus ELKL motif kinase 2 short form (EMK2) mRNA |
| AF240782 | Trailer AAAACA, Position 2673 Mus musculus ELKL motif kinase 2 long form (EMK2) mRNA |
| CAAAACAAGT count=4 | |
| U26228 | Trailer AACATC, Position 36 Mus musculus clone pGN1-24 satellite RNA sequence. |
| CAAAAGGTTA count=4 | |
| AB029930 | Trailer CTGAAA, Position 2423 Mus musculus mRNA for caveolin-1 beta isoform |
| AB029929 | Trailer CTGAAA, Position 2375 Mus musculus mRNA for caveolin-1 alfa isoform |
| CAAAAGTACC count=4 | |
| AF061017 | Trailer CAGGGA, Position 1212 Mus musculus UDP-glucose dehydrogenase (Ugdh) mRNA |
| CAAACACACA count=4 | |
| M34857 | Trailer CTAGGA, Position 936 Mouse Hox-2.5 mRNA. |
| CAAAGCAGTG count=4 | |
| M61909 | Trailer CTCCCA, Position 2083 Mouse transcription factor p65 (NF-kappa-B p65) mRNA |
| CAACACCGTA count=4 | |
| D26090 | Trailer TGCAGC, Position 2241 Mouse mRNA for mCDC46 protein |
| CACACAATGG count=4 | |
| AF033186 | Trailer AGACCT, Position 850 Mus musculus WSB-1 mRNA |
| CACAGGAGGG count=4 | |
| AB033168 | Trailer TTCCAA, Position 4531 Mus musculus mRNA for nuclear protein ZAP |
| CACATGCGTG count=4 | |
| AF141312 | Trailer TAGCAG, Position 222 Mus musculus hypoxia induced gene 1 (Hig1) mRNA |
| CACCACCTTG count=4 | |
| U58337 | Trailer GCCAGC, Position 1665 Mus musculus ligatin (Lgtn) mRNA |
| CAGAAGAAGA count=4 | |
| U01665 | Trailer ACCGCA, Position 413 Mus musculus BALB/c NUC1 mRNA |
| U81030 | Trailer AAAAGA, Position 3906 Mus musculus treacle (tcof1) mRNA |
| AF001794 | Trailer AAAAGA, Position 3962 Mus musculus Treacher Collins Syndrome protein (Tcof1) mRNA |
| CAGATGACCG count=4 | |
| Z67745 | Trailer TGGTGG, Position 604 M.musculus mRNA for phosphatase 2A catalytic subunit |
| AF076192 | Trailer TGGTGG, Position 799 Mus musculus protein phosphatase type 2A catalytic subunit alpha |
| CAGCCTGACC count=4 | |
| U10118 | Trailer TGCACA, Position 876 Mus musculus endothelial-monocyte activating polypeptide II mRNA |
| CATCAATTTT count=4 | |
| X95399 | Trailer TAGTAT, Position 185 M.musculus mRNA for M31 protein |
| CATCACTTCA count=4 | |
| U41751 | Trailer TGGAGA, Position 456 Mus musculus EI24 (EI24) mRNA |
| CATCAGGTAT count=4 | |
| AF176814 | Trailer GTTGAA, Position 1682 Mus musculus Abl-philin 2 mRNA |
| CATTGGTTTC count=4 | |
| L32836 | Trailer TCAGTC, Position 1657 Mus musculus (clone C7/B9) S-adenosyl homocysteine hydrolase (ahcy) |
| CATTTCTTCT count=4 | |
| AB045321 | Trailer GCATGA, Position 4257 Mus musculus brain cDNA |
| CCACAATTAA count=4 | |
| X13135 | Trailer ACTGCA, Position 3261 Murine mRNA fragment for fatty acid synthase (EC 2.3.1.85). |
| AF127033 | Trailer ACTGCA, Position 8309 Mus musculus fatty acid synthase mRNA |
| CCAGAAGGAG count=4 | |
| AB041654 | Trailer CTAGAG, Position 2530 Mus musculus brain cDNA |
| CCAGCACCGA count=4 | |
| J03928 | Trailer GGGGAA, Position 2445 Mouse CD1 phosphofructokinase (PFK) mRNA |
| CCAGGAAGGA count=4 | |
| X73230 | Trailer CCATCA, Position 2770 M.musculus mRNA for arylsulfatase A. |
| CCAGGAGTCA count=4 | |
| L06047 | Trailer AGCTCT, Position 830 Mus musculus glutathione transferase mRNA |
| CCCTATGGGG count=4 | |
| AF168682 | Trailer AGGAGG, Position 1647 Mus musculus Fas activated serine/threonine FAST kinase mRNA |
| CCCTCGGACC count=4 | |
| AB041655 | Trailer CCCTTG, Position 1763 Mus musculus brain cDNA |
| CCCTTCTACC count=4 | |
| X13460 | Trailer TACTCC, Position 2298 Mouse mRNA for p68 protein of the lipocortin family. |
| CCTAAGGAGG count=4 | |
| AF156958 | Trailer AGGCGC, Position 169 Mus musculus NTF2-related export protein NXT1 (NXT1) mRNA |
| CCTACCTACA count=4 | |
| AF067395 | Trailer ACCCTA, Position 838 Mus musculus NIX (Nix) mRNA |
| CCTCTGGGTC count=4 | |
| U16741 | Trailer ATGTCT, Position 1249 Mus musculus capping protein alpha 2 subunit mRNA |
| CCTGGAGGCT count=4 | |
| D01093 | Trailer GGAGAG, Position 2201 Mus musculus mRNA for PC4 |
| CCTGGAGTGA count=4 | |
| X59047 | Trailer CCAGAG, Position 705 M.musculus MD3 mRNA. |
| CCTTCTTTTA count=4 | |
| AF069519 | Trailer ATAATT, Position 1245 Mus musculus T:G mismatch-specific thymine-DNA glycosylase TDGb |
| CGCGGGCGTA count=4 | |
| K01700 | Trailer AACGCT, Position 1141 Mouse p53 cellular tumor antigen |
| M13873 | Trailer AACGCT, Position 1052 Mouse p53 mRNA |
| M13872 | Trailer AACGCT, Position 1096 Mouse p53 mRNA |
| X01237 | Trailer AACGCT, Position 1141 Mouse mRNA for cellular tumour antigen p53. |
| AF161020 | Trailer AACGCT, Position 994 Mus musculus tumor supressor p53 (p53) mRNA |
| AF151353 | Trailer AACGCT, Position 1106 Mus musculus tumor suppressor p53 (p53) mRNA |
| AF051368 | Trailer AACGCT, Position 1009 Mus musculus tumor suppressor p53 mRNA |
| AB017816 | Trailer AACGCT, Position 1085 Mus musculus mRNA for p53 |
| AB017815 | Trailer AACGCT, Position 1085 Mus musculus mRNA for p53 |
| CGTTTGGCCT count=4 | |
| AB025048 | Trailer CTCAAT, Position 1841 Mus musculus mRNA for Sid6061p |
| CTACCAGCTA count=4 | |
| X56906 | Trailer CCACAG, Position 1615 Mouse OP-1 mRNA for osteogenic protein 1. |
| CTAGCTCAGA count=4 | |
| M26071 | Trailer GAGGCT, Position 1115 Mouse tissue factor (mtf) mRNA |
| CTCATCATCG count=4 | |
| X82438 | Trailer CGGGTA, Position 1263 M.musculus mRNA for monocarboxyalate transporter. |
| AF058055 | Trailer CGGGTA, Position 1452 Mus musculus monocarboxylate transporter 1 (mMCT1) mRNA |
| CTCCTGCCCC count=4 | |
| AJ005253 | Trailer GACAAG, Position 825 Mus musculus mRNA for ClpP protease. |
| CTCTTTGCCA count=4 | |
| D87990 | Trailer ACCCCA, Position 943 House mouse; Musculus domesticus mRNA for UDP-galactose transporter |
| CTGAGCAACA count=4 | |
| AF071316 | Trailer CCTGAC, Position 858 Mus musculus COP9 complex subunit 7a (COPS7a) mRNA |
| CTGAGGAAGC count=4 | |
| AF083876 | Trailer GTAAAT, Position 607 Mus musculus XMP (Xmp) mRNA |
| CTGAGGGCTG count=4 | |
| X61753 | Trailer CATACC, Position 1829 M.musculus mRNA for heat shock transcription factor 1. |
| CTGCTCCTCT count=4 | |
| L24118 | Trailer CTAGCC, Position 3219 Mouse primary response gene B94 mRNA |
| CTGGCGCGGG count=4 | |
| AF146224 | Trailer TAGCCA, Position 1160 Mus musculus HMG domain protein HMGX2 (Hmgx2) mRNA |
| CTGGGGCTGG count=4 | |
| U19604 | Trailer AATGCT, Position 3153 Mus musculus DNA ligase I mRNA |
| U04674 | Trailer AATGCT, Position 2906 Mus musculus DNA ligase I mRNA |
| CTGGGGTTTA count=4 | |
| U69270 | Trailer TACCTA, Position 2119 Mus musculus nuclear LIM interactor (NLI) mRNA |
| CTGGTGAAGC count=4 | |
| U73037 | Trailer TGGAGC, Position 1626 Mus musculus interferon regulatory factor 7 (mirf7) mRNA |
| CTGTGAATGG count=4 | |
| L38706 | Trailer TAATAC, Position 196 Mus musculus (BALB/c) monoclonal antibody 2B10 heavy-chain variable |
| AJ007749 | Trailer AACCTG, Position 1292 Mus musculus mRNA for caspase-8. |
| AJ000641 | Trailer AACCTG, Position 1085 Mus musculus FLICE partial CDS (flicem1). |
| AF067834 | Trailer AACCTG, Position 1519 Mus musculus caspase-8 mRNA |
| CTGTGGCTAA count=4 | |
| AF150101 | Trailer GTAAGA, Position 67 Mus musculus small zinc finger-like protein (Tim9a) mRNA |
| GAAGCCTGTG count=4 | |
| Y08948 | Trailer TGTAAA, Position 747 Mus musculus mRNA; contains SIG41 antisense sequences. |
| GACCAGATGT count=4 | |
| M91602 | Trailer TCGCAG, Position 441 M.musculus myosin light chain 2 mRNA |
| GCAAGTGACA count=4 | |
| L13129 | Trailer CGAGTG, Position 1374 Mus musculus synexin mRNA |
| GCCTGGCAAT count=4 | |
| AB039837 | Trailer GCAGTA, Position 914 Mus musculus Cope1 mRNA for nonclathrin coat protein epsilon-COP |
| GCTTGCATAT count=4 | |
| X54149 | Trailer TTTTAA, Position 1204 Mouse mRNA for MyD118 |
| GCTTTGATGA count=4 | |
| AB031290 | Trailer CCACAA, Position 1339 Mus musculus mRNA for C7-1 protein |
| GGAACACCAT count=4 | |
| M19438 | Trailer GGACGC, Position 130 Mouse cytosolic thymidine kinase mRNA clone pMtk9 |
| M11945 | Trailer GGACGC, Position 237 Mouse cytosolic thymidine kinase mRNA clone pMtk4 |
| GGGGACAAAG count=4 | |
| X73361 | Trailer CGCGGC, Position 22 M.musculus mAES-2 mRNA. |
| GGTCGGGTTC count=4 | |
| D89063 | Trailer TGTTTT, Position 1516 Mus musculus mRNA for oligosaccharyltransferase |
| GTAGCAGGAG count=4 | |
| AF041476 | Trailer GAAACA, Position 1174 Mus musculus BAF53a (Baf53a) mRNA |
| GTCTTCGAAC count=4 | |
| D50494 | Trailer CTCCGA, Position 2373 Mouse mRNA for murine RCK |
| GTTAACTATG count=4 | |
| Z38117 | Trailer AGCTAG, Position 2845 M.musculus mRNA for dead-box RNA helicase. |
| GTTATTGCTC count=4 | |
| AB019212 | Trailer TTTCAT, Position 1431 Mus musculus mRNA for syntaxin 7 |
| GTTGAGACAC count=4 | |
| AF243512 | Trailer AACGTG, Position 668 Mus musculus Ran-interacting protein MOG1 mRNA |
| TAAAGACCCC count=4 | |
| AJ250027 | Trailer CAAGGT, Position 2656 Mus musculus mRNA for DEAD box protein (dp103 gene). |
| AF220454 | Trailer CAAGGT, Position 2784 Mus musculus regulator of steroidogenic factor-1 mRNA |
| TACTACCTAG count=4 | |
| X90582 | Trailer CTTTCA, Position 652 M.musculus mRNA for rat translocon-associated protein delta |
| TACTGCTGTA count=4 | |
| U51037 | Trailer CAGCTA, Position 3779 Mus musculus 11-zinc-finger transcription factor (CTCF) mRNA |
| TAGAAGGGAG count=4 | |
| M97200 | Trailer CTTCAC, Position 1455 Mus musculus erythroid krueppel-like transcription factor mRNA |
| TAGCTGCTCA count=4 | |
| AF239765 | Trailer TGAAGA, Position 1157 Mus musculus nuclear protein Ytm1p mRNA |
| AB041608 | Trailer TGAAGA, Position 1680 Mus musculus brain cDNA |
| TATTTTATGC count=4 | |
| U01664 | Trailer ATATTG, Position 1728 Mus musculus PPAR gamma mRNA |
| U09138 | Trailer ATATTG, Position 1687 Mus musculus peroxisome proliferator activated protein-gamma-2 |
| U01841 | Trailer ATATTG, Position 2045 Mus musculus B6/CBAF1J peroxisome proliferator activated receptor |
| TCAGCACAAT count=4 | |
| U73478 | Trailer AGAGCC, Position 329 Mus musculus acidic nuclear phosphoprotein pp32 mRNA |
| AF022957 | Trailer AGAGCC, Position 371 Mus musculus cerebellar leucine rich acidic nuclear protein (Lanp) |
| TCATCCATTG count=4 | |
| AB011002 | Trailer AATTTG, Position 1383 Mus musculus mRNA for choline kinase |
| TCATTGTCAG count=4 | |
| AF020055 | Trailer ATTTTG, Position 2413 Mus musculus Wdr1 protein mRNA |
| TCTGTGTGTG count=4 | |
| AF152842 | Trailer TGTGTG, Position 1432 Mus musculus strain BALB/c polymyositis scleroderma overlap |
| AF152841 | Trailer TGTGTG, Position 1383 Mus musculus strain BALB/c polymyositis scleroderma overlap |
| TCTTATACCC count=4 | |
| U07890 | Trailer AAAAAA, Position 2556 Mus musculus C57BL/6J epidermal surface antigen (mesa) mRNA |
| TCTTGCTGCA count=4 | |
| AF112983 | Trailer TAATAG, Position 968 Mus musculus group IID secretory phospholipase A2 (Pla2) mRNA |
| TCTTTTGCCA count=4 | |
| L15447 | Trailer AGAAGT, Position 942 Mouse small nuclear RNA (Rnu1a-1) mRNA |
| TGAAACCAAG count=4 | |
| X64713 | Trailer TATCTT, Position 1759 M.musculus mRNA for cyclin B1. |
| TGAGAAGATG count=4 | |
| AF171053 | Trailer TGGATG, Position 1683 Mus musculus thioredoxin reductase TR3 (Tr3) mRNA |
| AF136399 | Trailer TGGATG, Position 1720 Mus musculus thioredoxin reductase (TrxR2) mRNA |
| AB027566 | Trailer TGGATG, Position 1717 Mus musculus TXNRD2 mRNA for thioredoxin reductase 2 |
| TGCCGAGCTG count=4 | |
| AF240630 | Trailer CTGAAT, Position 5950 Mus musculus IQ motif containing GTPase activating protein 1 |
| TGCTAGAAAA count=4 | |
| AJ404004 | Trailer GCTCAA, Position 1285 Mus musculus mRNA for ER protein 58 (EP58 gene). |
| TGCTTCCATC count=4 | |
| M16360 | Trailer ATGTCT, Position 698 Mouse major urinary protein V (MUP V) mRNA |
| TGCTTGCCCC count=4 | |
| U89772 | Trailer AAACAA, Position 1339 Mus musculus PETA-3 (CD151) mRNA |
| TGGACCTCAC count=4 | |
| U67303 | Trailer CTCTGA, Position 2038 Mus musculus KRAB-A interacting protein mRNA |
| X99644 | Trailer CTCTGA, Position 1648 M.musculus mRNA for TIF1 beta protein. |
| TGGAGACTGA count=4 | |
| U79774 | Trailer GTCCAG, Position 1786 Mus musculus NNP-1 var (NNP-1) mRNA |
| U79773 | Trailer GTCCAG, Position 1633 Mus musculus NNP-1 (NNP-1) mRNA |
| TGGAGCCCTG count=4 | |
| AF136277 | Trailer GAATCC, Position 1325 Mus musculus cathepsin Z precursor (Ctsz) mRNA |
| TGGAGGTGGA count=4 | |
| U32394 | Trailer TGTGGA, Position 508 Mus musculus Max-interacting transcriptional repressor (Mad3) mRNA |
| AB027290 | Trailer CGGACA, Position 357 Mus musculus SID 99 mRNA for small GTP binding protein |
| TGGGCCTGAA count=4 | |
| U60001 | Trailer GCGCGG, Position 281 Mus musculus protein kinase C inhibitor (mPKCI) mRNA |
| TGTGGCTGGG count=4 | |
| U22035 | Trailer ACAAGA, Position 516 Mus musculus 20S proteasome subunit Lmp7 (Lmp7q allele) mRNA |
| U22034 | Trailer ACAAGA, Position 516 Mus musculus 20S proteasome subunit Lmp7 (Lmp7r |
| U22033 | Trailer ACAAGA, Position 516 Mus musculus 20S proteasome subunit Lmp7 (Lmp7k |
| U22032 | Trailer ACAAGA, Position 516 Mus musculus 20S proteasome subunit Lmp7 (Lmp7b allele) mRNA |
| U22031 | |