Annotation
- Annotation
- Identified tags
| ATGCTAGTCT count=1114 | |
| L31609 | Trailer TTGTAC, Position 226 Mus musculus (clone mcori-1ck9) S29 ribosomal protein mRNA |
| GTGGATGGCA count=531 | |
| M11686 | Trailer GAGTGG, Position 1269 Mouse endo B cytokeratin mRNA |
| M36376 | Trailer GAGTGG, Position 1264 Mouse keratin D mRNA |
| GAGAAGATGC count=444 | |
| X80699 | Trailer AGGAGT, Position 464 M.musculus L26 mRNA. |
| TGCAACTGTT count=422 | |
| U11248 | Trailer AAATAA, Position 266 Mus musculus C57BL/6J ribosomal protein S28 mRNA |
| AGTCTTTAAA count=407 | |
| M62952 | Trailer ATAAAA, Position 638 Mus musculus ribosomal protein L19 |
| GAGAGGGCAA count=289 | |
| X15962 | Trailer ACCACG, Position 339 Mouse mRNA for ribosomal protein S12. |
| AATGCCCTCA count=265 | |
| U29402 | Trailer TTAAAG, Position 191 Mus musculus acidic ribosomal phosphoprotein P1 mRNA |
| TGCGGTGACT count=255 | |
| X57961 | Trailer TGATGT, Position 662 M.musculus mRNA for ribosomal protein L7. |
| X60289 | Trailer TGATGT, Position 452 M.musculus mRNA for ribosomal protein S24. |
| CTGACCACAT count=248 | |
| AF260271 | Trailer GAACAA, Position 637 Mus musculus 60S ribosomal Protein L9 mRNA |
| TACAATGAAG count=242 | |
| M37761 | Trailer CTCTGA, Position 312 Mouse calcyclin mRNA |
| X66449 | Trailer CTCTGA, Position 405 M.musculus mRNA for calcyclin. |
| X52278 | Trailer CTCTGA, Position 321 Mouse 5B10 mRNA for calcyclin. |
| AGGCTACTAC count=232 | |
| X05021 | Trailer AAAGTT, Position 336 Murine mRNA with homology to yeast L29 ribosomal protein gene. |
| GGTGCCACCC count=224 | |
| M33330 | Trailer ACTCCT, Position 426 Mouse insulinoma (rig) mRNA |
| ATCTTGTGAA count=223 | |
| M20632 | Trailer AACCCA, Position 1617 Mouse LLRep3 protein mRNA from a repetitive element |
| AF283559 | Trailer AACCCA, Position 811 Mus musculus ribosomal protein S2 mRNA |
| AGCCCTAATC count=204 | |
| M21836 | Trailer CTCTGG, Position 1640 Mouse extra-embryonic endodermal cytokeratin type II (EndoA) mRNA |
| M22831 | Trailer CTCTGG, Position 1587 Mouse keratin type II (EndoA) mRNA |
| AAGCAAAAAA count=182 | |
| X83590 | Trailer AAAAAA, Position 325 M.musculus mRNA for ribosomal protein L5 |
| TGAAATGAAC count=175 | |
| AB037665 | Trailer CAGCCC, Position 319 Mus musculus rpl38 mRNA for ribosomal protein L38 |
| ATCTTTTCTA count=165 | |
| X68193 | Trailer AAACAA, Position 555 M.musculus mRNA for nucleoside diphoshate kinase B. |
| TGACTCCCTC count=162 | |
| M11944 | Trailer TTCTGG, Position 69 Mouse serum induced RNA with partial B2 repeat and consensus of the |
| M30250 | Trailer TTCTGG, Position 518 Mouse RNA polymerase III-associated B2 repeat. |
| M11284 | Trailer TTCTGG, Position 1224 Mouse MHC class I Qa-Tla mRNA |
| L00606 | Trailer TTCTGG, Position 1217 Mus musculus MHC class I Qa-1a antigen mRNA |
| M31450 | Trailer TTCTGG, Position 4 Mouse B2 repetitive sequence mRNA |
| M31447 | Trailer TTCTGG, Position 45 Mouse B2 repetitive sequence mRNA |
| M31446 | Trailer TTCTGG, Position 66 Mouse B2 repetitive sequence mRNA |
| M31444 | Trailer TTCTGG, Position 70 Mouse B2 repetitive sequence mRNA |
| Y00225 | Trailer GGAGGA, Position 1192 Murine mRNA for J1 protein |
| L04280 | Trailer CACAGT, Position 471 Mus musculus ribosomal protein (Rpl12) mRNA |
| TTTGCCGGCA count=133 | |
| M81745 | Trailer AGCAGC, Position 123 Mouse 1400 base pair ubiquitin mRNA |
| X51703 | Trailer AGCAGC, Position 917 Mouse mRNA for ubiquitin. |
| ATTGTAGATG count=130 | |
| D29802 | Trailer AATTGA, Position 890 Mouse mRNA for G protein beta subunit homologue |
| X75313 | Trailer AATTGA, Position 896 M.musculus (C57BL/6) GB-like mRNA. |
| CGGGAGGTGT count=128 | |
| X75895 | Trailer GCGGCT, Position 149 M.musculus mRNA for ribosomal protein L36. |
| CGGAAGAAGA count=125 | |
| M88335 | Trailer TGATGG, Position 468 M.musculus mRNA sequence. |
| AAAGCCCGGA count=117 | |
| X73829 | Trailer AAGGCA, Position 609 M.musculus mRNA for ribosomal protein S8. |
| CCAGACTGGT count=117 | |
| M76763 | Trailer TCCTGA, Position 256 Mus musculus ribosomal protein (Ke-3) mRNA |
| AAGTCGTGCT count=114 | |
| D26610 | Trailer TCTGGC, Position 171 Mouse mRNA for monoclonal nonspecific suppressor factor beta |
| X65922 | Trailer TCTGGC, Position 159 M.musculus fau mRNA. |
| AF147745 | Trailer TCTGGC, Position 225 Mus musculus monoclonal non-specific suppressor factor beta mRNA |
| TAACACCCTC count=108 | |
| M12185 | Trailer TTCTGC, Position 1181 Mouse class I MHC H2-D-beta transplantation antigen mRNA (b |
| K00129 | Trailer TTCTGC, Position 1181 Mouse MHC class I H2-D gene (haplotype b) |
| U47327 | Trailer TTCTGC, Position 1496 Mus musculus MHC class I heavy chain precursor (H-2D(k)) mRNA |
| U47326 | Trailer TTCTGC, Position 1505 Mus musculus MHC class I heavy chain precursor (H-2D(d)) mRNA |
| U47325 | Trailer TTCTGC, Position 1495 Mus musculus MHC class I heavy chain precursor (H-2D(b)) mRNA |
| X00246 | Trailer TTCTGC, Position 1265 Mouse mRNA with a Set 1 repetitive element for a class I major |
| ATGTCTTCTC count=107 | |
| M28727 | Trailer CATGTT, Position 1144 Mouse alpha-tubulin gene M-alpha-2 |
| M13446 | Trailer CATGTT, Position 1520 Mouse alpha-tubulin isotype M-alpha-2 mRNA |
| AGTATAATAA count=105 | |
| AF283667 | Trailer AGGAGT, Position 1703 Mus musculus phosphoglycerate mutase 1 (Pgam1) mRNA |
| AACAATAAAC count=104 | |
| M33863 | Trailer CACAGC, Position 1382 Mouse 2'-5' oligo A synthetase mRNA |
| X04958 | Trailer CACAGC, Position 1382 Mouse mRNA for 2-5A synthetase (2'-5') oligoadenylate synthetase. |
| CATCTGCATT count=103 | |
| X15267 | Trailer TGCGGC, Position 884 Mouse mRNA for acidic ribosomal phosophoprotein PO. |
| GGAGACATTG count=103 | |
| U93864 | Trailer TCACAG, Position 371 Mus musculus ribosomal protein S11 mRNA |
| TATACAGTCG count=102 | |
| M29016 | Trailer GGAAAC, Position 669 Mouse ribosomal protein L7 (rpL7) mRNA |
| GTTCCAAAGC count=101 | |
| J05277 | Trailer CAGAAG, Position 4054 Mouse hexokinase mRNA |
| TGCATATGGA count=101 | |
| M17516 | Trailer TGATGG, Position 818 Mouse lactate dehydrogenase A-4 (LDH-A) mRNA |
| U13687 | Trailer TGATGG, Position 1618 Mus musculus DBA/2J lactate dehydrogenase-A (LDH-A) mRNA |
| AGCTGAAGGT count=98 | |
| Z50159 | Trailer TCATGG, Position 205 M.musculus mRNA for Sui1. |
| CGCAGGCGCA count=98 | |
| U28917 | Trailer AGGCCC, Position 116 Mus musculus 60S ribosomal protein (A52) mRNA |
| TATCACCTGT count=97 | |
| X06407 | Trailer CACCAT, Position 627 Mouse mRNA for 21 kd polypeptide under translational control. |
| TGCCGCAAGT count=96 | |
| AF118402 | Trailer GCTACG, Position 303 Mus musculus ubiquitin/60S ribosomal fusion protein mRNA |
| TGTGCAGGGT count=95 | |
| M21495 | Trailer ATTAAC, Position 1513 Mouse cytoskeletal gamma-actin mRNA |
| X13055 | Trailer ATTAAC, Position 1455 Murine mRNA for cytoplasmic gamma-actin. |
| AF195094 | Trailer ATTAAC, Position 1571 Mus musculus gamma actin-like protein (Actl) mRNA |
| TGATGCCCTC count=94 | |
| M36402 | Trailer TTCTGG, Position 86 Mouse B2 repetitive sequence mRNA. |
| J03293 | Trailer TTCTGG, Position 2163 Mouse skeletal muscle phosphorylase kinase |
| D17630 | Trailer TTCTGG, Position 1782 Mouse mRNA for interleukin-8 receptor (IL-8R) |
| M31445 | Trailer TTCTGG, Position 66 Mouse B2 repetitive sequence mRNA |
| U34071 | Trailer TTCTGG, Position 2742 Mus musculus alpha-galactosidase A mRNA |
| U19119 | Trailer TTCTGA, Position 2042 Mus musculus G-protein-like LRG-47 mRNA |
| U16958 | Trailer TTCTGG, Position 1183 Mus musculus pre-T cell receptor alpha-type chain precursor mRNA |
| D25213 | Trailer GGAGAT, Position 306 Mouse rpS17 mRNA for ribosomal protein S17 |
| U43206 | Trailer AGTACA, Position 1141 Mus musculus phosphatidylethanolamine binding protein mRNA |
| AB046417 | Trailer AGTACA, Position 1144 Mus musculus HCNPpp mRNA for hippocampal cholinergic |
| X06406 | Trailer CAGAGA, Position 675 Mouse mRNA for translational controlled 40 kDa polyyeptide p40. |
| AF140348 | Trailer CAGAGA, Position 683 Mus musculus 37kDa oncofetal antigen mRNA |
| CATTTAATTA count=89 | |
| AF263458 | Trailer GAGAAC, Position 515 Mus musculus onzin mRNA |
| TCTCTTCCCA count=87 | |
| M73436 | Trailer GAGGAA, Position 711 Mouse ribosomal protein S4 (Rps4) mRNA |
| CCCTCCCACA count=85 | |
| M36829 | Trailer GAATAG, Position 2387 Mouse heat-shock protein hsp84 mRNA. |
| M18186 | Trailer GAATAG, Position 2397 Mouse 84 kD heat shock protein mRNA |
| ACAGAGCTGG count=83 | |
| AF085809 | Trailer GAAGAT, Position 3408 Mus musculus synapsin Ib (SynI) mRNA |
| CCGCGAGGCC count=83 | |
| U67770 | Trailer CGGAAG, Position 265 Mus musculus ribosomal protein S26 (RPS26) mRNA |
| AATGTGCGGA count=82 | |
| U93863 | Trailer TTGAGC, Position 300 Mus musculus ribosomal protein L21 mRNA |
| AAGTTTAAAT count=81 | |
| X16053 | Trailer GACTGT, Position 392 Mouse mRNA for thymosin beta-4. |
| TGATGATGAG count=80 | |
| AF029844 | Trailer GAGGAA, Position 361 Mus musculus elongation factor 1-beta homolog mRNA |
| AGCAAGCAGG count=79 | |
| J04181 | Trailer AGTACG, Position 1130 Mouse A-X actin mRNA |
| M12481 | Trailer AGTACG, Position 990 Mouse cytoplasmic beta-actin mRNA. |
| X03765 | Trailer AGTACG, Position 990 Mouse mRNA for cytoplasmatic beta-actin (pAL 41; AA 27-375). |
| X03672 | Trailer AGTACG, Position 1148 Mouse cytoskeletal mRNA for beta-actin. |
| GTGTACTTCA count=78 | |
| L32751 | Trailer TTGGGA, Position 777 Mouse (clone M1) GTPase (Ran) mRNA |
| AF159256 | Trailer TTGGGA, Position 752 Mus musculus Lps/Ran GTPase (lps(d)) mRNA |
| TTCGACACAG count=78 | |
| X81987 | Trailer AGAAGG, Position 717 M.musculus mRNA for TAX responsive element binding protein 107. |
| ACCATCCTGA count=77 | |
| AB016424 | Trailer TTATAT, Position 1016 Mus musculus rbm3 mRNA |
| AATGATGAGG count=76 | |
| M19141 | Trailer ACAAAC, Position 1748 Mouse heat shock protein 70 cognate mRNA |
| U27129 | Trailer ACAAAC, Position 1713 Mus musculus breast heat shock 73 protein (hsc73) mRNA |
| AATAAAGTGG count=75 | |
| M60456 | Trailer GTTTTT, Position 849 Mouse cyclophilin mRNA |
| X58990 | Trailer GTTTTT, Position 975 Mouse mCyP-S1 mRNA for cyclophilin CyP-S1. |
| AGAATAATAA count=73 | |
| X01838 | Trailer ATATAA, Position 618 Mouse mRNA for beta2-microglobulin. |
| GCAGAACCAG count=72 | |
| L21027 | Trailer GGCATC, Position 1532 Mus musculus A10 mRNA |
| ACCATTTCCG count=70 | |
| X52803 | Trailer ACTGTG, Position 506 Mouse mRNA for cyclophilin (EC 5.2.1.8). |
| TGCGTATGGC count=69 | |
| X74856 | Trailer GGCCAT, Position 383 M.musculus L28 mRNA for ribosomal protein L28. |
| TGAAAATTGG count=67 | |
| X52940 | Trailer ATTAAA, Position 326 Mouse COX7c1 mRNA for cytochrome c oxidase VIIc (EC 1.9.3.1). |
| TGACGCCCTC count=67 | |
| M36411 | Trailer TTCTGG, Position 1149 Mouse Mpv17 mRNA |
| U56773 | Trailer TTCTGG, Position 2438 Mus musculus pelle-like protein kinase mRNA |
| AF103876 | Trailer TTCTGG, Position 2698 Mus musculus pelle-like protein kinase mRNA |
| ATGTGAGCAT count=65 | |
| X76772 | Trailer CGTGGA, Position 621 M.musculus mRNA for ribosomal protein S3. |
| TGCATGCCCT count=65 | |
| J04716 | Trailer GGGTTC, Position 511 Mouse ferritin light chain |
| AGCGGTGGGA count=62 | |
| Y00348 | Trailer ATGACA, Position 184 Mouse mRNA for ribosomal protein S6. |
| GTCGTTCTGG count=62 | |
| M22432 | Trailer TAAGAA, Position 1197 Mus musculus protein synthesis elongation factor Tu (eEF-Tu |
| X13661 | Trailer TAAGAA, Position 1174 Mouse mRNA for elongation factor 1-alpha (EF 1-alpha). |
| AGAGAAGCAG count=60 | |
| M19381 | Trailer ATATTG, Position 561 Mouse calmodulin (Cam I) mRNA |
| X61432 | Trailer ATATTG, Position 401 M.musculus mRNA for calmodulin. |
| GATGAAGAAC count=58 | |
| U48364 | Trailer CTGTTA, Position 6141 Mus musculus muscle-specific transcriptional activator alpha-NAC |
| U22151 | Trailer CTGTTA, Position 190 Mus musculus translational regulatory factor alpha NAC/1.9.2. |
| TTCCATCCCT count=58 | |
| L06465 | Trailer TCTGCT, Position 475 Mus musculus cytochrome oxidase subunit VIa (liver-type isoform) |
| U08440 | Trailer TCTGCT, Position 465 Mus musculus Balb/c cytochrome c oxidase subunit VIaL mRNA |
| AAGTCCTTTG count=56 | |
| AF214527 | Trailer TGAAAG, Position 258 Mus musculus ribosomal protein L27 (RPL27) mRNA |
| CTGGTGTCCT count=56 | |
| U41341 | Trailer TGACCG, Position 151 Mus musculus endothelial monocyte-activating polypeptide I mRNA |
| AGGAGGGTCT count=54 | |
| D90151 | Trailer ATTTCC, Position 1299 Mouse mRNA for CArG-binding factor-A |
| CTGTGGATGA count=53 | |
| AF027707 | Trailer GGGGGT, Position 1374 Mus musculus apoptosis activator Mtd (Mtd) mRNA |
| TAGGCACTAC count=53 | |
| M22479 | Trailer ATATGT, Position 1564 Mouse tropomyosin isoform 2 mRNA |
| TCACTCAGCA count=53 | |
| U70494 | Trailer ACAAGT, Position 895 Mus musculus histone H2A.Z (H2A.Z) mRNA |
| ATGTTATTCA count=52 | |
| U37721 | Trailer ATTCCA, Position 326 Mus musculus cytochrome c oxidase subunit VIII precursor (Cox8l) |
| TACAAATGTG count=49 | |
| X03688 | Trailer GTGGAA, Position 139 Mouse mRNA fragment for elongation factor TU (N-terminus). |
| TGCGCTTCCA count=49 | |
| Z85979 | Trailer GAGTGC, Position 348 M.musculus mRNA for histone H3.3A. |
| X91866 | Trailer GAGTGC, Position 627 M.musculus mRNA for H3.3A variant histone. |
| TGTGTAAATG count=49 | |
| D87896 | Trailer GGGACG, Position 540 Mus musculus phgpx mRNA for phospholipid hydroperoxide glutathione |
| AF045769 | Trailer GGGACG, Position 349 Mus musculus myocardium phospholipid hydroperoxide glutathione |
| AF045768 | Trailer GGGACG, Position 458 Mus musculus testis phospholipid hydroperoxide glutathione |
| CAAGTGTTTA count=48 | |
| X13605 | Trailer ACCATA, Position 832 Murine mRNA for replacement variant histone H3.3. |
| CCACGTATCC count=48 | |
| D10916 | Trailer TGGGCC, Position 84 Mus musculus NEDD-6 mRNA |
| U12403 | Trailer TGGGCC, Position 372 Mus musculus Csa-19 mRNA |
| ACCACCAAGG count=46 | |
| X56135 | Trailer ACTTGA, Position 203 Mouse mRNA for prothymosin alpha. |
| ATGCTCCTGC count=46 | |
| AB025408 | Trailer AGCTGA, Position 996 Mus musculus mRNA for sid478p |
| ATGCTAAAAG count=44 | |
| X65704 | Trailer GAGATA, Position 195 M.musculus mRNA for small nuclear ribonucleoprotein E. |
| GACCCATCAG count=44 | |
| AF060089 | Trailer GTGTTT, Position 463 Mus musculus proteasome subunit C8 (Psma3) mRNA |
| AF055983 | Trailer GTGTTT, Position 495 Mus musculus proteasome alpha7/C8 subunit mRNA |
| AAGAAATACA count=43 | |
| U27316 | Trailer CATAAT, Position 964 Mus musculus adenine nucleotide translocase-2 (Ant2) mRNA |
| U10404 | Trailer CATAA , Position 879 Mus musculus adenine nucleotide translocase mRNA |
| X70847 | Trailer CATAAT, Position 966 M.musculus mRNA for adenine nucleotide translocase. |
| CTGCCCTGAG count=42 | |
| U51679 | Trailer CACACC, Position 813 Mus musculus thioredoxin peroxidase (Tpx) mRNA |
| U20611 | Trailer CACACC, Position 838 Mus musculus thioredoxin-dependent peroxide reductase (tpx) mRNA |
| X82067 | Trailer CACACC, Position 845 M.musculus mRNA for thiol-specific antioxidant. |
| GTGTGTTGTC count=42 | |
| U67771 | Trailer TGGAGG, Position 354 Mus musculus ribosomal protein L8 (RPL8) mRNA |
| ATGAGGGAGT count=41 | |
| X03040 | Trailer TCCGGT, Position 954 Mouse mRNA for initiation factor eIF-4A long form. |
| X03039 | Trailer TCCGGT, Position 951 Mouse mRNA for initiation factor eIF-4AI. |
| TTGTTGTGAG count=41 | |
| L29441 | Trailer TGTGTG, Position 1944 Mus musculus mRNA |
| AF181684 | Trailer TGTGTG, Position 2147 Mus musculus membrane protein TMS-1 mRNA |
| AATATTTATT count=40 | |
| X58486 | Trailer GATGTG, Position 367 M.musculus mRNA for cytochrome c oxidase subunit VIIa. |
| AF037371 | Trailer GATGTG, Position 409 Mus musculus cytochrome c oxidase subunit VIIa-L precursor (Cox7al) |
| AGTGGCTTTG count=40 | |
| U65636 | Trailer AATGAA, Position 782 Mus musculus beta proteasome subunit (Lmp3) mRNA |
| CAAAAAAAAA count=40 | |
| AF200349 | Trailer AAA , Position 2566 Mus musculus GPR35 mRNA |
| AB031055 | Trailer AAA , Position 1180 Mus musculus DDP1 mRNA for deafness dystonia protein 1 |
| CACACGGAAG count=39 | |
| X13333 | Trailer GGGAAA, Position 1292 Mouse CD14 mRNA for myelid cell-specific leucine-rich glycoprotein. |
| CCCCTCCCCC count=39 | |
| U88550 | Trailer GCTGGT, Position 4308 Mus musculus protocadherin 2C mRNA |
| AGAACATTTG count=38 | |
| X14607 | Trailer TTCCAA, Position 325 Mouse SV-40 induced 24p3 mRNA. |
| ATCCACCTGC count=38 | |
| U78085 | Trailer TCACTG, Position 359 Mus musculus ribosomal protein S5 mRNA |
| Y12431 | Trailer TCACTG, Position 349 M.musculus mRNA for ribosomal protein S5. |
| GTGACTGGGT count=38 | |
| M37829 | Trailer GGCCAT, Position 455 Mouse mitochondrial cytochrome c oxidase subunit IV (COX IV) mRNA |
| X54691 | Trailer GGCCAT, Position 457 Mouse COX4 mRNA for cytochrome c oxidase subunit IV (EC 1.9.3.1). |
| GCCACCTACC count=37 | |
| M13805 | Trailer GCCGTC, Position 456 Mouse type I epidermal keratin mRNA |
| M28698 | Trailer GCAGCC, Position 1192 Mus musculus cytokeratin No. 19 mRNA |
| X03492 | Trailer GCAGCC, Position 804 Mouse mRNA for type I 47 kd keratin. |
| AF053235 | Trailer GCCGTC, Position 1239 Mus musculus keratin 16 mRNA |
| AB013608 | Trailer GCCGTC, Position 1165 Mus musculus mRNA for cytokeratin 17 |
| GCTCATGGAT count=37 | |
| AF224264 | Trailer ATTTTT, Position 1642 Mus musculus pigpen protein mRNA |
| AAAAAAAAAA count=35 | |
| U95215 | Trailer AAAAAA, Position 1851 Mus musculus bile acid CoA: amino acid N-acyltransferase (Baat) |
| X82648 | Trailer AAAAAA, Position 878 M.musculus mRNA for apolipoprotein D. |
| AF218865 | Trailer AAAAAA, Position 2807 Mus musculus BETA3 mRNA |
| AF146227 | Trailer AAAAAA, Position 2880 Mus musculus MutS homolog 5 (Msh5) mRNA |
| AF107352 | Trailer AAAAAA, Position 2669 Mus musculus MSH5 (Msh5) mRNA |
| AB041581 | Trailer AAAAAA, Position 1864 Mus musculus brain cDNA |
| AGGGACCACG count=35 | |
| X65553 | Trailer AACAGA, Position 2168 M.musculus mRNA for poly(A) binding protein. |
| CTGGTAATGC count=35 | |
| X61232 | Trailer ACTTTG, Position 1826 Mouse mRNA for carboxypeptidase H. |
| TCTCTTGCCA count=35 | |
| Z31555 | Trailer CCCAGA, Position 1647 M.musculus (129/Sv) Ccte mRNA for CCT (chaperonin containing TCP-1) |
| TGTCTGTGTG count=35 | |
| J04696 | Trailer CTGCCT, Position 935 Mouse glutathione S-transferase class mu (GST5-5) mRNA |
| ATTTATGGAG count=34 | |
| X53333 | Trailer GTTCTG, Position 654 Mouse mRNA for triosephosphate isomerase (EC 5.3.1.1). |
| CCCAACAATG count=34 | |
| M28732 | Trailer TCAAGA, Position 60 Mouse beta-tubulin gene M-beta-5 |
| CGGGGGTTCA count=34 | |
| L08115 | Trailer ATTTAT, Position 896 Mus musculus antigen (homologue of human CD9 antigen) mRNA |
| TTTGTGAAGA count=34 | |
| D50527 | Trailer CCCTGA, Position 271 Mouse mRNA for TI-225 |
| AATAAATGTG count=33 | |
| X02389 | Trailer ATTTTT, Position 2274 Mouse mRNA for urokinase. |
| AF155821 | Trailer TGAATT, Position 4255 Mus musculus CPG16 (Cpg16) mRNA |
| AF155820 | Trailer TGAATT, Position 1652 Mus musculus doublecortin-like protein (Dcl) mRNA |
| AF155819 | Trailer TGAATT, Position 5203 Mus musculus doublecortin-like kinase (Dclk) mRNA |
| AGGTTGAGGG count=33 | |
| Z31556 | Trailer GCAGCC, Position 1835 M.musculus (129/Sv) Cctg mRNA for CCT (chaperonin containing TCP-1) |
| CACATCTCAA count=33 | |
| M93980 | Trailer AGAAGT, Position 533 Mouse 24.6 kda protein mRNA |
| X75312 | Trailer AGAAGT, Position 526 M.musculus (C57BL/6) QM mRNA. |
| CATATACCCA count=33 | |
| M88756 | Trailer TTAATA, Position 20 M.musculus mRNA polyA site sequence. |
| U11027 | Trailer TTAATA, Position 171 Mus musculus C57BL/6J Sec61 protein complex gamma subunit mRNA |
| AAGGTCGGAA count=32 | |
| D00611 | Trailer AGAAAT, Position 328 Mus musculus mRNA for basigin |
| Y16258 | Trailer AGAAAT, Position 270 Mus musculus mRNA for basigin III |
| Y16257 | Trailer AGAAAT, Position 324 Mus musculus mRNA for basigin II |
| Y16256 | Trailer AGAAAT, Position 328 Mus musculus mRNA for basigin |
| ACTCAGTGAA count=32 | |
| AF171100 | Trailer CAATCC, Position 1952 Mus musculus TBX1 protein mRNA |
| TTGACGCTAA count=32 | |
| X53068 | Trailer ATGCAG, Position 1191 Mouse mRNA for proliferating cell nuclear antigen. |
| ACTTGTTATG count=31 | |
| AF092039 | Trailer TACATT, Position 745 Mus musculus steroid receptor RNA activator mRNA |
| ATGGTGTAAT count=31 | |
| AF073993 | Trailer AAGACA, Position 1529 Mus musculus heterogenous nuclear ribonucleoprotein A2/B1 (hnRNP |
| CCCACTTATG count=31 | |
| M24509 | Trailer TGACTT, Position 482 Mouse ferritin heavy chain |
| J03941 | Trailer TGACTT, Position 499 Mouse ferritin heavy chain (MFH) mRNA |
| X12812 | Trailer TGACTT, Position 445 Murine mRNA for macrophage ferritin heavy subunit. |
| CTTGATGCCT count=31 | |
| U60288 | Trailer GTGCCT, Position 795 Mus musculus proteasome subunit iota mRNA |
| TTGACCACTC count=31 | |
| D00472 | Trailer ATGGAA, Position 1043 Mus musculus mRNA for cofilin |
| CACTGTGAAG count=30 | |
| AB021289 | Trailer GATGGC, Position 805 Mus musculus mRNA for epididymal secretory protein |
| GTTGTAATTG count=30 | |
| AF017153 | Trailer TTGACA, Position 2754 Mus musculus putative RNA helicase and RNA dependent ATPase |
| TCTGGCAGTG count=30 | |
| M33212 | Trailer GAGGAA, Position 928 Mouse nucleolar protein N038 mRNA |
| TGCAATGAGG count=30 | |
| X70303 | Trailer CTGGCT, Position 710 M.musculus MC3 mRNA for proteasome. |
| AF099733 | Trailer CTGGCT, Position 633 Mus musculus proteasome subunit C3 (Psma2) mRNA |
| AATAAACCGT count=29 | |
| M11310 | Trailer TTTGAT, Position 3039 Mouse adenine phosphoribosyltransferase (APRT) |
| CCCGTGCCCC count=29 | |
| X97490 | Trailer TGCCTA, Position 819 M.musculus mRNA for PNG protein. |
| TTCAAGAAGG count=29 | |
| U43918 | Trailer AAAAGG, Position 452 Mus musculus proliferation-associated protein 1 mRNA |
| X84789 | Trailer AAAAGG, Position 358 M.musculus mRNA for p38-2G4. |
| ACAGTATTGT count=28 | |
| M28739 | Trailer CTCAGA, Position 442 Mouse beta-tubulin gene M-beta-2 |
| TCAGGGCAGA count=28 | |
| D63707 | Trailer AATGAT, Position 1424 Mouse mRNA for hepatoma derived growth factor (HDGF) |
| AF251787 | Trailer AATGAT, Position 1583 Mus musculus TDRM1 protein (Tdrm1) mRNA |
| TGACACCCTC count=28 | |
| M36401 | Trailer TTCTGG, Position 85 Mouse B2 repetitive sequence mRNA. |
| AF127662 | Trailer TTCTGG, Position 2398 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase |
| AF127661 | Trailer TTCTGG, Position 2367 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase |
| AF127660 | Trailer TTCTGG, Position 2424 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha |
| AF127659 | Trailer TTCTGG, Position 2479 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase |
| AF127658 | Trailer TTCTGG, Position 2479 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha |
| AF127657 | Trailer TTCTGG, Position 2270 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase |
| AF127656 | Trailer TTCTGG, Position 2327 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha |
| TGTATTGTTC count=28 | |
| Z19599 | Trailer TTACTG, Position 1674 M.musculus epsilon 14-3-3 isoform mRNA. |
| D87663 | Trailer TTACTG, Position 1620 Mus musculus mRNA for 14-3-3 epsilon |
| CTTGCCAGTG count=27 | |
| Z31557 | Trailer TAAAAC, Position 2117 M.musculus (129/Sv) Cctz mRNA for CCT (chaperonin containing TCP-1) |
| TGCTAGAGCT count=27 | |
| M30779 | Trailer GTAATA, Position 517 Mouse glucose-regulated protein 78 mRNA |
| D78645 | Trailer GTAATA, Position 2068 Mouse mRNA for 78 kDa glucose-regulated protein |
| M19351 | Trailer GTAATA, Position 437 Mouse immunoglobulin heavy chain binding protein mRNA |
| AJ002387 | Trailer GTAATA, Position 1987 Mus musculus mRNA for BiP. |
| AAGCATTTGC count=26 | |
| X56602 | Trailer GCCTGA, Position 546 Mus musculus mRNA Interferon-induced 15-KDa protein. |
| ACAAATAAAT count=26 | |
| U01137 | Trailer GGTGCT, Position 938 Mus musculus B6D2F1 clone 2C#4 mRNA. |
| TAAGCCAGAA count=26 | |
| M33215 | Trailer GGGGCG, Position 494 Mouse beta-galactoside-binding lectin (L-34) mRNA |
| J03723 | Trailer GGGGCG, Position 786 Mouse carbohydrate binding protein 35 mRNA |
| X16834 | Trailer GGGGCG, Position 832 Mouse mRNA for Mac-2 antigen. |
| TATCCTAGCC count=26 | |
| AF129888 | Trailer GGGAGG, Position 987 Mus musculus Sui1 homolog mRNA |
| TGAATGTCCG count=26 | |
| AF304351 | Trailer AGAGAG, Position 910 Mus musculus eukaryotic translation elongation factor 1-delta mRNA |
| TGACGTGCCG count=26 | |
| M32599 | Trailer CCTGGA, Position 770 Mouse glyceraldehyde-3-phosphate dehydrogenase mRNA |
| AACAGTAGTT count=25 | |
| D83999 | Trailer GTCTTT, Position 1107 Mus musculus mRNA for the third largest RNA polymerase II subunit |
| ACCCGTCATA count=25 | |
| AF043120 | Trailer AAATCT, Position 1565 Mus musculus beta prime coatomer protein mRNA |
| TAATGGTCCT count=25 | |
| U80819 | Trailer AACAGT, Position 983 Mus musculus glutathione-S-transferase homolog mRNA |
| TGTGGAGAAT count=25 | |
| U15571 | Trailer GTACAG, Position 3575 Mus musculus amyloid precursor-like protein 2 isoform 751 |
| Z27070 | Trailer GTACAG, Position 3422 M.musculus (balb/c) mRNA for putative protein. |
| TTTGGAAACA count=25 | |
| M63114 | Trailer TCAAAA, Position 3239 Mouse surfeit locus surfeit 4 protein mRNA |
| ACAAAGTTGG count=24 | |
| D84096 | Trailer TTT , Position 3220 Mouse mRNA for ubiquitin carboxyl-terminal hydrolase (UBP) |
| AGAACAACAG count=24 | |
| AB027565 | Trailer ACAGTG, Position 3123 Mus musculus TXNRD1 mRNA for thioredoxin reductase 1 |
| CATCTGTGTA count=24 | |
| L19661 | Trailer GTTTCT, Position 1266 Mus musculus (clones pB1001 |
| X97982 | Trailer GTTTCT, Position 1314 M.musculus mRNA for poly(C)-binding protein |
| X75947 | Trailer GTTTCT, Position 1260 M.musculus mCBP mRNA. |
| CGGGTGTCCA count=24 | |
| AF060091 | Trailer GTGACA, Position 733 Mus musculus proteasome subunit X (Psmb5) mRNA |
| AB003304 | Trailer GTGACA, Position 736 Mus musculus mRNA for PSMB5 |
| CTACTGTGGA count=24 | |
| J04633 | Trailer TGACAC, Position 2367 Mouse heat shock protein 86 mRNA |
| X16857 | Trailer TGACAC, Position 731 Mouse mRNA for HSP86 heat-shock protein. |
| TATTGAAAGT count=24 | |
| X00525 | Trailer CAGCCC, Position 4676 Mouse 28S ribosomal RNA. |
| TTGTGTCAGT count=24 | |
| X61433 | Trailer CAGGTT, Position 1933 M.musculus mRNA for sodium/potassium ATPase beta subunit. |
| AAGCCCTTCT count=23 | |
| X77585 | Trailer TCCATT, Position 185 M.musculus mRNA for thioredoxin. |
| AAGGTGGGAG count=23 | |
| AF197951 | Trailer ATGCCA, Position 181 Mus musculus thioredoxin peroxidase PMP20 mRNA |
| AF124994 | Trailer ATGCCA, Position 270 Mus musculus peroxisomal membrane protein 20 mRNA |
| AF110733 | Trailer ATGCCA, Position 107 Mus musculus peroxiredoxin 5 (Prdx5) mRNA |
| AB041573 | Trailer ATGCCA, Position 514 Mus musculus brain cDNA |
| ACATTTTTTT count=23 | |
| L32974 | Trailer TCTCTG, Position 1684 Mouse interferon-inducible protein homologue mRNA |
| CAGTATATGC count=23 | |
| M33934 | Trailer CTTGAA, Position 1617 Mouse IMP dehydrogenase mRNA |
| CAGTATCTGA count=23 | |
| L13791 | Trailer AAGACC, Position 1083 Mus musculus (clone Chop11) C/ATF mRNA |
| M94087 | Trailer AAGACC, Position 1245 M.musculus mATF4 (mTR67) mRNA |
| X61507 | Trailer AAGACC, Position 1255 M.musculus ATF-4 gene for activating transcription factor 4. |
| AB012277 | Trailer AAGACC, Position 726 Mus musculus mRNA for ATF4 |
| CGTATTACCT count=23 | |
| AF097438 | Trailer ATTGTG, Position 765 Mus musculus brain expressed X-linked protein 1 (Bex1) mRNA |
| AF051347 | Trailer ATTGTG, Position 753 Mus musculus REX-3 mRNA |
| GCATTGCGCA count=23 | |
| D49686 | Trailer GGGGAG, Position 1400 Mus musculus mRNA for Tat binding protein-1 |
| TAAAAAAAAA count=23 | |
| L07049 | Trailer AAAAAA, Position 7358 Mus musculus aggrecan mRNA |
| TCCTCAGCAT count=23 | |
| M10062 | Trailer TTTCTT, Position 2429 Mouse IgE-binding factor mRNA |
| TTAAATAAAA count=23 | |
| AB025049 | Trailer CTTGTT, Position 1587 Mus musculus mRNA for Sid393p |
| ATAAGAGGCA count=22 | |
| X53824 | Trailer CGTGAT, Position 746 Mouse X16 mRNA. |
| ATTAATGCCC count=22 | |
| U76112 | Trailer TTGAAG, Position 3620 Mus musculus translation repressor NAT1 mRNA |
| U63323 | Trailer CTGAAG, Position 3589 Mus musculus translation initiation factor (Eif4g2) mRNA |
| CAACTCCAAT count=22 | |
| M16465 | Trailer TCAACA, Position 479 Mouse calpactin I light chain (p11) mRNA |
| CCAGTAATGT count=22 | |
| U97327 | Trailer AAACAA, Position 1107 Mus musculus calcyclin binding protein (CACYBP) mRNA |
| CTCCAGCTCC count=22 | |
| Z31399 | Trailer ATCAGC, Position 1584 M.musculus Ccth mRNA for CCT eta subunit (chaperonin containing |
| TAGCTTTCTT count=22 | |
| U92454 | Trailer TTCATT, Position 493 Mus musculus WW domain binding protein 5 mRNA |
| TGTCTCTCCC count=22 | |
| S70184 | Trailer AGATGG, Position 740 MHC I=H-2Kd homolog [alternatively spliced |
| M23900 | Trailer AGATTG, Position 8 Mus musculus PYS-2 mRNA |
| M23899 | Trailer AGATTG, Position 57 Mus musculus PYS-2 mRNA |
| M23896 | Trailer AGATTG, Position 169 Mus musculus PYS-2 mRNA |
| M23895 | Trailer AGATTG, Position 169 Mus musculus PYS-2 mRNA |
| M23894 | Trailer AGATTG, Position 169 Mus musculus PYS-2 mRNA |
| M23893 | Trailer AGATTG, Position 169 Mus musculus mRNA |
| M69073 | Trailer AGATTG, Position 1051 Mus musculus mRNA |
| M69072 | Trailer AGATTG, Position 1051 Mus musculus mRNA |
| M69071 | Trailer AGATTG, Position 1051 Mus musculus mRNA |
| Z46757 | Trailer ACCCAG, Position 432 M.musculus mRNA for high mobility group 2 protein. |
| AF019661 | Trailer AAGAAG, Position 777 Mus musculus zeta proteasome chain mRNA |
| AF060092 | Trailer CGCTGA, Position 598 Mus musculus proteasome subunit C10-II (Psmb3) mRNA |
| U75680 | Trailer CCATGT, Position 1484 Mus musculus histone stem-loop binding protein (SLBP) mRNA |
| CTCTAGGGGT count=21 | |
| AB012276 | Trailer TATGGG, Position 799 Mus musculus mRNA for ATFx |
| TCAGTTCTGT count=21 | |
| M88755 | Trailer GTTTAC, Position 768 M.musculus mRNA polyA site sequence. |
| AF011644 | Trailer GTTTAC, Position 870 Mus musculus oral tumor suppressor homolog (Doc-1) mRNA |
| TGCATCGTGA count=21 | |
| U60824 | Trailer CCAAAG, Position 692 Mus musculus proteasome beta-subunit C5 (Psmb1) mRNA |
| X80686 | Trailer CCAAAG, Position 681 M.musculus mRNA for C5 component of protease. |
| TTACTATATA count=21 | |
| L10244 | Trailer AGAAAA, Position 836 Mouse spermidine/spermine N1-acetyltransferase (SSAT) mRNA |
| AGGGAAGCAG count=20 | |
| L31642 | Trailer ACATT , Position 450 Mus musculus calmodulin (CamC) mRNA |
| AGTAAATTAC count=20 | |
| X16319 | Trailer ATGATA, Position 2079 Mouse mRNA for 54K subunit of signal recognition particle. |
| ATAATTGCTG count=20 | |
| AF004565 | Trailer TATCAT, Position 785 Mus musculus dUTPase mRNA |
| CCATTTACTA count=20 | |
| Y13071 | Trailer TTTGAA, Position 1380 Mus musculus mRNA for 26S proteasome non-ATPase subunit. |
| GCCTGCACAT count=20 | |
| L02913 | Trailer CAGCCC, Position 311 Mouse growth factor-induced delayed early response protein |
| L10613 | Trailer CAGCCC, Position 337 Mus musculus glycosylation-inhibiting factor mRNA |
| L07607 | Trailer CAGCCC, Position 241 Mus musculus migration inhibitory factor (10K protein) mRNA |
| Z23048 | Trailer CAGCCC, Position 258 M.musculus macrophage migration inhibitory factor. |
| GTGTTGTTTA count=20 | |
| U58633 | Trailer CCGTTG, Position 1043 Mus musculus p34 cdc2 kinase mRNA |
| X16461 | Trailer CCGTTG, Position 959 Mouse cdc2 mRNA for CDC2 kinase. |
| ACTGATGTCA count=19 | |
| D78642 | Trailer TTGCAA, Position 2067 Mouse mRNA for CAAT-box binding protein NF-YA |
| AGAAAAAAAA count=19 | |
| X62897 | Trailer AAAA , Position 533 Mus musculus mRNA for skeletal muscle chloride channel |
| X62896 | Trailer AAAA , Position 730 M.musculus mRNA (cDNA2) skeletal muscle chloride channel |
| Y12883 | Trailer AAAAAA, Position 1446 M.musculus mRNA for nonselenium glutathione peroxidase. |
| AGAATAGCCA count=19 | |
| M58661 | Trailer CGTTTG, Position 1358 Mouse M1/69-J11d heat stable antigen mRNA |
| X53825 | Trailer CGTTTG, Position 1308 M.musculus mRNA for heat stable antigen. |
| ATGACGCTGA count=19 | |
| M99167 | Trailer ATAAAT, Position 1329 Mouse rearranged RNA binding protein (FLI-2) mRNA |
| D86729 | Trailer ATAAAT, Position 1294 Mouse mRNA for topoisomerase-inhibitor suppressed |
| D86728 | Trailer ATAAAT, Position 1138 Mouse mRNA for topoisomerase-inhibitor suppressed |
| ATTACCATTA count=19 | |
| AF108397 | Trailer GAATAT, Position 18 Mus musculus sodium/calcium exchanger isoform NaCa2 (Ncx1) mRNA |
| AF108396 | Trailer GAATAT, Position 18 Mus musculus sodium/calcium exchanger isoform NaCa3 (Ncx1) mRNA |
| CGCGAATGCT count=19 | |
| AF124786 | Trailer CGGAGG, Position 181 Mus musculus NADH-ubiquinone oxidoreductase B8 subunit (Ndufa2) |
| CTGTACAGCC count=19 | |
| U04443 | Trailer AGTGTG, Position 48 Mus musculus non-muscle myosin light chain 3 (MLC3nm) mRNA |
| GTAAAATTAG count=19 | |
| M76124 | Trailer ACGAAC, Position 1246 Mus musculus EGP314 precursor mRNA |
| TACTTCCTGA count=19 | |
| U27106 | Trailer GTGCTG, Position 2012 Mus musculus clathrin-associated AP-2 complex AP50 subunit mRNA |
| TATGAGTGAT count=19 | |
| M35970 | Trailer AGGACG, Position 489 Mouse tumor metastatic process-associated protein (NM23) gene mRNA |
| U85511 | Trailer AGGACG, Position 539 Mus musculus nucleoside diphosphate kinase A long form mRNA |
| AF033377 | Trailer AGGACG, Position 487 Mus musculus nucleoside diphosphate kinase A (NDPK-A) long form |
| TGTGGAGAAG count=19 | |
| AJ001633 | Trailer ATGATT, Position 1151 Mus musculus mRNA for annexin III. |
| TTCCCGTTGG count=19 | |
| D21252 | Trailer CCGCTC, Position 499 Mouse mRNA for OSF-3 |
| D16142 | Trailer CCGCTC, Position 495 Mouse mRNA for MSP23. |
| AAGGTCTCCA count=18 | |
| AF031568 | Trailer TGCAAA, Position 1332 Mus musculus heterogeneous nuclear ribonucleoprotein G (Hnrnpg) |
| ACCGACCGCA count=18 | |
| U76253 | Trailer TCGAGA, Position 757 Mus musculus E25B protein mRNA |
| AB030204 | Trailer TCGAGA, Position 573 Mus musculus mRNA for E25B protein |
| AB030203 | Trailer TCGAGA, Position 777 Mus musculus mRNA for E25B protein |
| AGGAGTACCA count=18 | |
| AF072243 | Trailer AATAAG, Position 1664 Mus musculus methyl-CpG binding protein MBD2 (Mbd2) mRNA |
| CACCAGCTGA count=18 | |
| M60419 | Trailer GAATTC, Position 1033 Mouse Y-box binding protein 1/DNA binding protein B mRNA |
| M62867 | Trailer GAATTC, Position 1033 Mouse Y box transcription factor (MSY-1) mRNA |
| X57621 | Trailer GAATTC, Position 938 M.musculus YB-1 mRNA. |
| U33197 | Trailer GAATTC, Position 1029 Mus musculus Y-box binding protein mYB-1b mRNA |
| AF038994 | Trailer GAATTC, Position 844 Mus musculus Y box transcription factor mRNA |
| CATATTTAGT count=18 | |
| AF139894 | Trailer TTTATA, Position 1277 Mus musculus RNA-binding protein alpha-CP1 (Pcbp1) mRNA |
| CATTTGTACC count=18 | |
| M63630 | Trailer AATAAA, Position 1639 Mus musculus predicted GTP binding protein (IRG-47) mRNA |
| TCACTCTCAG count=18 | |
| M35725 | Trailer GAGAGC, Position 316 Mouse Cu-Zn superoxide dismutase mRNA |
| X06683 | Trailer GAGAGC, Position 316 Mouse mRNA for Cu-Zn superoxide dismutase (EC 1.15.1.1). |
| TTGTCTGTGG count=18 | |
| D14077 | Trailer ACTGTT, Position 1009 Mouse mRNA for sulfated glycoprotein-2 |
| L08235 | Trailer ACTGTT, Position 981 Mus musculus clusterin mRNA |
| L05670 | Trailer ACTGTT, Position 1009 Mus musculus alpha-clustrin and beta-clustrin mRNA |
| AF248058 | Trailer ACTGTT, Position 705 Mus musculus sulfated glycoprotein-2 isoform 2 mRNA |
| AF248057 | Trailer ACTGTT, Position 1034 Mus musculus sulfated glycoprotein-2 isoform 1 mRNA |
| TTTGATAAAA count=18 | |
| X59379 | Trailer AAAAAT, Position 2836 Mouse mRNA for amyloid beta precursor (protease nexin II). |
| TTTGGCACCA count=18 | |
| AF232717 | Trailer TTGGAA, Position 950 Mus musculus protein arginine N-methyltransferase 1 (Mrmt1) mRNA |
| AF232716 | Trailer TTGGAA, Position 1004 Mus musculus protein arginine N-methyltransferase 1 (Mrmt1) mRNA |
| TTTTTTTTTT count=18 | |
| D89571 | Trailer TTTTTT, Position 2395 Mus musculus mRNA for ryudocan core protein |
| AATCAGAGAT count=17 | |
| AF190797 | Trailer TCAGTT, Position 844 Mus musculus actin-related protein 11 (Arp11) mRNA |
| ATAGGCAAAC count=17 | |
| Y17223 | Trailer GTGGCA, Position 284 Mus musculus mRNA for F1F0-ATP synthase |
| ATATTCGGTC count=17 | |
| X63020 | Trailer AAGTCA, Position 421 M.musculus mRNA for U2-snRNP b'' (pRNP31). |
| X63019 | Trailer AAGTCA, Position 343 M.musculus mRNA for U2-snRNP b'' (pRNP11). |
| CCCATCATCA count=17 | |
| AF176516 | Trailer TTCGCC, Position 1785 Mus musculus E2F1-inducible (Eig4) mRNA |
| CGGAAGAAAT count=17 | |
| AF170920 | Trailer AAAGGC, Position 776 Mus musculus heat shock protein (HSPC030) mRNA |
| TGGAACACCA count=17 | |
| AF004591 | Trailer ACTGCT, Position 314 Mus musculus copper transport protein Atox1 (ATOX1) mRNA |
| TGGTTCCTGA count=17 | |
| X15963 | Trailer GCCCAA, Position 249 Mouse mRNA for cytochrome c oxidase subunit Va. |
| TGTTGTGGTG count=17 | |
| AF270646 | Trailer GGAACA, Position 902 Mus musculus c14orf1-like protein mRNA |
| TTCAGCAGAT count=17 | |
| U05333 | Trailer ATTAGA, Position 236 Mus musculus co-chaperonin 'cofactor A' mRNA |
| AAAACCAACC count=16 | |
| M27358 | Trailer CGGTGA, Position 227 Mouse 18S ribosomal RNA |
| AACATCATTG count=16 | |
| Z23055 | Trailer CAGCAG, Position 258 M.musculus protein-tyrosine-phosphatase mRNA |
| AAGGGTGTCA count=16 | |
| U17332 | Trailer CGCTGG, Position 203 Mus musculus ribosomal protein L9 (musl9) mRNA |
| U17331 | Trailer CGCTGG, Position 203 Mus musculus mutant ribosomal protein L9 (musl9mu) mRNA |
| ACTCTGGAGT count=16 | |
| L75822 | Trailer TCAGCG, Position 605 Mus musculus follistatin-like protein (mac25) mRNA |
| AB012886 | Trailer TCAGCG, Position 627 Mus musculus mRNA for mac25 |
| ACTGTCACTT count=16 | |
| D17653 | Trailer CAGAGG, Position 229 Mouse mRNA for HBp15/L22 |
| AGCCCCGCCT count=16 | |
| U94479 | Trailer GTCACA, Position 1694 Mus musculus integrin binding protein kinase mRNA |
| AGGAATCCAG count=16 | |
| U60593 | Trailer GCCAGG, Position 2762 Mus musculus cytoplasmic protein Ndr1 (Ndr1) mRNA |
| U52073 | Trailer GCCAGG, Position 2795 Mus musculus TDD5 mRNA |
| ATTAGGGGTT count=16 | |
| AF099020 | Trailer TGGTCT, Position 1024 Mus musculus hepatocyte growth factor activator inhibitor type 2 |
| AF099019 | Trailer TGGTCT, Position 951 Mus musculus hepatocyte growth factor activator inhibitor type 2 |
| AF099016 | Trailer TGGTCT, Position 1122 Mus musculus hepatocyte growth factor activator inhibitor type 2 |
| CCAACACAGC count=16 | |
| AJ272019 | Trailer GATATG, Position 417 Mus musculus mRNA for 20S proteasome subunit C2 (Psma1 gene). |
| AF060088 | Trailer GATATG, Position 388 Mus musculus proteasome subunit C2 (Psma1) mRNA |
| CCCAAGATTG count=16 | |
| U60329 | Trailer AGGATG, Position 385 Mus musculus proteasome activator PA28 beta subunit mRNA |
| D87910 | Trailer AGGATG, Position 403 Mus musculus mRNA for PA28 beta subunit |
| GTGTGTGTCT count=16 | |
| D83037 | Trailer GCGTGC, Position 1297 Mouse mRNA for 14-3-3 zeta |
| D87660 | Trailer GCGTGC, Position 1346 Mus musculus mRNA for 14-3-3 zeta |
| GTTTTTTTTT count=16 | |
| AF043257 | Trailer CTATGA, Position 2926 Mus musculus beta5B integrin mRNA |
| AF043256 | Trailer CTATGA, Position 2955 Mus musculus beta5A integrin mRNA |
| AF022110 | Trailer CTATGA, Position 3049 Mus musculus integrin beta-5 mRNA |
| TGACACAGGG count=16 | |
| X60671 | Trailer GCAGTC, Position 2575 M.musculus mRNA for ezrin. |
| TGCCCACCAT count=16 | |
| AF119675 | Trailer ATTCCT, Position 911 Mus musculus small GTP-binding protein RAB25 (Rab25) mRNA |
| TGGCGCCCTC count=16 | |
| D10084 | Trailer TTCTGG, Position 160 Mus musculus aberrant mRNA for complement component C4. |
| TGTGAGGAGT count=16 | |
| U58888 | Trailer CGTTGT, Position 891 Mus musculus SH3-containing protein SH3P2 mRNA |
| TTCACACAGC count=16 | |
| M58761 | Trailer ATTATG, Position 1278 Mouse Sm-B protein gene |
| ACAAATACAG count=15 | |
| X12507 | Trailer ATTCTG, Position 1373 Mouse eIF-4AII mRNA for protein synthesis initiation factor 4AII. |
| ACCCCCAATT count=15 | |
| X54966 | Trailer GTATGG, Position 707 M.musculus ctsB gene (3' end) for cathepsin B. |
| AGAATTAAAT count=15 | |
| AF044222 | Trailer TTGTAT, Position 2476 Mus musculus HCG-1 protein (HCG-1) mRNA |
| AGTGCCTTTG count=15 | |
| X80638 | Trailer GCTACC, Position 490 M.musculus rhoC mRNA. |
| ATAAGTCTTA count=15 | |
| AB025405 | Trailer ACTTTT, Position 1063 Mus musculus mRNA for sid2895p |
| ATGGAAGCAG count=15 | |
| D49429 | Trailer ACATTC, Position 3182 Mouse NCBP-29 mRNA for PW29 |
| D37790 | Trailer ACATTC, Position 2555 Mouse mRNA for beta-1 |
| CCAGTGAAGG count=15 | |
| M63903 | Trailer GTTTCT, Position 1714 Mus musculus B/HLH/Z protein (Myn) mRNA |
| CTTCCTATGC count=15 | |
| U25708 | Trailer AGAACC, Position 1707 Mus musculus CD98 heavy chain mRNA |
| X14309 | Trailer AGAACC, Position 1672 Murine mRNA for 4F2 antigen heavy chain. |
| AB023408 | Trailer AGAACC, Position 1685 Mus musculus mRNA for 4F2 heavy chain |
| GAGTACTTTT count=15 | |
| X56548 | Trailer , Position 1325 M.musculus Np-b mRNA for purine-nucleoside phosphorylase. |
| GGGGCCGCTG count=15 | |
| AF208026 | Trailer GTGCTC, Position 3152 Mus musculus OTRPC4 cation channel mRNA |
| TCTTCCATGT count=15 | |
| AB025409 | Trailer TACAAG, Position 706 Mus musculus mRNA for sid1334p |
| TGTTTGAAAA count=15 | |
| M36830 | Trailer CAAA , Position 1024 Mouse heat-shock protein hsp86 mRNA. |
| TTATATTAAA count=15 | |
| M25944 | Trailer GAAAAA, Position 517 Mouse carbonic anhydrase II (CAII) mRNA |
| K00811 | Trailer GAAAAA, Position 1265 Mouse carbonic anhydrase isozyme II mRNA |
| U37706 | Trailer GAAAAA, Position 460 Mus musculus carbonic anhydrase II (Car2) mRNA |
| TTCAGATTGA count=15 | |
| X12944 | Trailer TAATTC, Position 822 Mouse mRNA for HMG-17 chromosomal protein. |
| TTTGGGGGAA count=15 | |
| X80421 | Trailer TTGTTA, Position 91 M.musculus tex190 mRNA (3'region). |
| AAAAAACATG count=14 | |
| AF060093 | Trailer AAGAGG, Position 762 Mus musculus proteasome subunit C9 (Psma4) mRNA |
| AACAAGAAAT count=14 | |
| X14425 | Trailer GTTATG, Position 428 Mouse mRNA for profilin. |
| AACACCGCAA count=14 | |
| M13964 | Trailer CCTTTC, Position 1244 Mouse stimulatory G protein of adenylate cyclase |
| Y00703 | Trailer CCTTTC, Position 1298 Mouse uncoupled S49 cells mRNA for stimulatory GTP-binding protein |
| AF116268 | Trailer CCTTTC, Position 2386 Mus musculus G-protein XLalphas mRNA |
| AF107848 | Trailer CCTTTC, Position 2202 Mus musculus neuroendocrine-specific golgi protein p55 isoform 2 |
| AB041808 | Trailer CCTTTC, Position 1531 Mus musculus brain cDNA |
| AAGACAAGTG count=14 | |
| J02623 | Trailer , Position 1952 Mouse cytosolic aspartate aminotransferase isoenzyme mRNA |
| ACTTGTCAGT count=14 | |
| AB024935 | Trailer GTTCAG, Position 1145 Mus musculus Sid3177 mRNA |
| AGCCGCTCAA count=14 | |
| AF019662 | Trailer GATTCT, Position 669 Mus musculus C6-I proteasome chain mRNA |
| AGCTAAAGGC count=14 | |
| AF173297 | Trailer ACACTG, Position 276 Mus musculus e(y)2 homolog mRNA |
| ATCCTTGTGT count=14 | |
| U14648 | Trailer TGTGAA, Position 1731 Mus musculus putative myelin regulatory factor 1 mRNA |
| AF077858 | Trailer TGTGAA, Position 1710 Mus musculus splicing factor SC35 mRNA |
| CCCTTGGTTG count=14 | |
| AB024303 | Trailer CTGGAT, Position 1823 Mus musculus mRNA similar to human Sua1 |
| CCCTTTCCTG count=14 | |
| AF016294 | Trailer TGAATG, Position 1846 Mus musculus Ets transcription factor (ELF3) mRNA |
| CCTATTATGG count=14 | |
| Y17345 | Trailer CAATGA, Position 388 Mus musculus mRNA for protein-tyrosine-phosphatase IF1. |
| Y17344 | Trailer CAATGA, Position 649 Mus musculus mRNA for protein-tyrosine-phosphatase IF2. |
| Y17343 | Trailer CAATGA, Position 388 Mus musculus mRNA for protein-tyrosine-phosphatase IF2P. |
| CTGGCTGATG count=14 | |
| Y11460 | Trailer TGCTCA, Position 144 Mus musculus mRNA for b4 integrin interactor |
| AF108462 | Trailer TCCTCA, Position 681 Mus musculus b4 integrin interactor homolog mRNA |
| AF047046 | Trailer TCCTCA, Position 612 Mus musculus translation initiation factor eIF6 mRNA |
| CTGGGTACTA count=14 | |
| J03636 | Trailer AGGTCA, Position 303 Mouse T-cell-activating protein (TAP) mRNA |
| M18184 | Trailer AGGTCA, Position 270 Mouse lymphocyte differentiation antigen (Ly-6.2) mRNA |
| X04653 | Trailer AGGTCA, Position 346 Mouse mRNA for Ly-6 alloantigen (Ly-6E.1). |
| TACTACCTAG count=14 | |
| X90582 | Trailer CTTTCA, Position 652 M.musculus mRNA for rat translocon-associated protein delta |
| TATGAGTGAC count=14 | |
| M65037 | Trailer AG , Position 447 Mouse metastasis-reducing protein (nm23) mRNA |
| TCACATTTTG count=14 | |
| U62545 | Trailer AGAAAC, Position 282 Mus musculus FK506-binding protein 25 homolog (mFKBP25) mRNA |
| AF135595 | Trailer AGAAAC, Position 803 Mus musculus 25 kDa FK506 binding protein FKBP25 (Fkbp25) mRNA |
| AF110812 | Trailer AGAAAC, Position 796 Mus musculus 25 kDa FK506-binding protein (Fkbp25) mRNA |
| TCTGAGTTCA count=14 | |
| AJ278064 | Trailer CAACGG, Position 1906 Mus musculus mRNA for beta |
| AJ272020 | Trailer AGGCCA, Position 602 Mus musculus partial mRNA for 20S proteasome subunit C2 (Psma1 |
| AF294899 | Trailer CAACGG, Position 1908 Mus musculus beta |
| TGCTCTGTTT count=14 | |
| M94450 | Trailer TATACC, Position 2370 Mus musculus epidermal growth factor receptor-binding protein GRB7 |
| TGTTCATACA count=14 | |
| AF231925 | Trailer TTTTTG, Position 3204 Mus musculus COPI coatomer complex |
| TTGCTGTATT count=14 | |
| U27838 | Trailer GTTACT, Position 3106 Mus musculus glycosyl-phosphatidyl-inositol-anchored protein |
| U18773 | Trailer GTTACT, Position 1792 Mus musculus GPI-anchored protein p137 mRNA |
| AAAATGTGGT count=13 | |
| D55720 | Trailer GCCAGA, Position 1684 Mouse mRNA for nuclear pore-targeting complex |
| U34229 | Trailer GCCAGA, Position 1507 Mus musculus pendulin mRNA |
| U12270 | Trailer GCCAGA, Position 1622 Mus musculus pendulin (pendulin) mRNA |
| ACCCAGAAGT count=13 | |
| D10024 | Trailer GGCTCT, Position 1044 Mouse mRNA for protein-tyrosine kinase substrate p36 (calpactin I |
| M14044 | Trailer GGCTCT, Position 1044 Mouse calpactin I heavy chain (p36) mRNA |
| ACTAAGAAAT count=13 | |
| X62743 | Trailer AAACTG, Position 1149 M.musculus Mb mRNA. |
| ACTTTGTAGT count=13 | |
| AF071314 | Trailer CATGTA, Position 1515 Mus musculus COP9 complex subunit 4 (COPS4) mRNA |
| AGCTATGAAG count=13 | |
| AB039919 | Trailer AAGGAA, Position 559 Mus musculus rheb mRNA for Ras homolog |
| AGTTGCCTGA count=13 | |
| U34259 | Trailer TTTCCC, Position 1168 Mus musculus lysosome-associated protein |
| ATTTGCAGTT count=13 | |
| U44752 | Trailer AAGGAA, Position 2992 Mus musculus hepatocyte nuclear factor 3 alpha (HNF-3A) mRNA |
| CACATGAGGA count=13 | |
| Y12474 | Trailer GATACT, Position 292 M.musculus mRNA for centrin gene. |
| CAGTTACCAG count=13 | |
| Y08702 | Trailer AAGATG, Position 429 M.musculus mRNA for neuronal protein 15.6. |
| CATACTGTGA count=13 | |
| L10905 | Trailer CTCCCG, Position 41 Mus musculus (clone Gcap27) mRNA sequence. |
| AF187066 | Trailer CTCCCG, Position 572 Mus musculus p75NTR-associated cell death executor (Nade) mRNA |
| AF097440 | Trailer CTCCCG, Position 567 Mus musculus brain expressed X-linked protein 3 (Bex3) mRNA |
| CATTTTAAAA count=13 | |
| M18209 | Trailer TTTGTA, Position 2420 Mouse transcription factor S-II |
| CCCTGGATAC count=13 | |
| L25674 | Trailer ATGGTC, Position 1566 Mus musculus ear-2 transcription factor mRNA |
| X76654 | Trailer ATGGTC, Position 1660 M.musculus mRNA for EAR2. |
| GCCAAAATCC count=13 | |
| AB015613 | Trailer TAAATT, Position 233 Mus musculus mRNA for SET |
| GTTTGGTTTT count=13 | |
| X58069 | Trailer GTTTTT, Position 1338 Mouse mRNA for Histone H2A.X. |
| TAGTTCTATC count=13 | |
| AB028895 | Trailer AAATAC, Position 2674 Mus musculus mRNA for cell-surface sialomucin MGC-24 |
| TCAATTGTAA count=13 | |
| AF133427 | Trailer ATAGAA, Position 1469 Mus musculus tetraspanin TM4-A homolog mRNA |
| TCACAGCCAG count=13 | |
| X59728 | Trailer TTCTGT, Position 72 M.musculus mRNA for gas5 growth arrest specific protein. |
| TGATTCCCTC count=13 | |
| X56974 | Trailer TTCTGG, Position 1979 M.musculus mRNA for external transcribed spacer (partial) B2 |
| TGCAACCCTA count=13 | |
| M18626 | Trailer TAGGTG, Position 292 Mouse long interspersed reptative mRNA. |
| AAAGCACGCC count=12 | |
| AF159571 | Trailer TGCATG, Position 1247 Mus musculus growth/differentiation factor-15 (Gdf15) mRNA |
| AAATTGGTAC count=12 | |
| AF035821 | Trailer AGAAAT, Position 466 Mus musculus GES30 mRNA |
| AF035208 | Trailer AGAAAT, Position 480 Mus musculus putative v-SNARE Vti1b mRNA |
| AAGAAGCCAC count=12 | |
| D38379 | Trailer GCCCCA, Position 1031 Mouse mRNA for pyrubate kinase M. |
| X97047 | Trailer GCCCCA, Position 1008 M.musculus mRNA for M2-type pyruvate kinase. |
| AATGTGTAGA count=12 | |
| M20617 | Trailer TGCCAT, Position 1410 Mouse ornithine decarboxylase mRNA |
| M12330 | Trailer TGCCAT, Position 843 Mouse kidney ornithine decarboxylase mRNA |
| M10624 | Trailer TGCCAT, Position 2111 Mouse ornithine decarboxylase mRNA |
| ACAGTCTTTC count=12 | |
| U52822 | Trailer AGCTAG, Position 266 Mus musculus ornithine decarboxylase antizyme mRNA |
| ACCAAAGGTA count=12 | |
| AF238866 | Trailer CAGTTA, Position 734 Mus musculus LNR42 mRNA |
| ACCTTTGTCT count=12 | |
| D26091 | Trailer GATAGC, Position 2251 Mus musculus mRNA for mCDC47 |
| ACTGTGCGCC count=12 | |
| AB000713 | Trailer CCCTCC, Position 1522 Mus musculus mCPE-R mRNA for CPE-receptor |
| AGGAGCTGGC count=12 | |
| L19737 | Trailer ATTGGC, Position 245 Mus musculus H+ ATP synthase subunit c mRNA |
| AGGATTATGG count=12 | |
| M24554 | Trailer TCTCCC, Position 873 Mouse lipocortin I mRNA |
| X07486 | Trailer TCTCCC, Position 901 Mouse mRNA for lipocortin I. |
| ATCTTGTCAC count=12 | |
| D16262 | Trailer TCCTTT, Position 1765 Mouse mRNA encoding unknown protein |
| CAAAACAAGT count=12 | |
| U26228 | Trailer AACATC, Position 36 Mus musculus clone pGN1-24 satellite RNA sequence. |
| CACCTGCATC count=12 | |
| AF104358 | Trailer TGCATT, Position 1544 Mus musculus synectin mRNA |
| AF061263 | Trailer TGCATT, Position 1501 Mus musculus semaF cytoplasmic domain associated protein 1 |
| CAGCTGGAAA count=12 | |
| U96746 | Trailer ACTGAA, Position 874 Mus musculus antioxidant enzyme AOE372 mRNA |
| CAGTCCATTC count=12 | |
| U95114 | Trailer AGCAGT, Position 427 Mus musculus fertilization antigen-1 mRNA |
| CCCTTTCCTC count=12 | |
| M63170 | Trailer ATTGAG, Position 528 Mouse alpha-B crystallin mRNA. |
| CTTAATATTT count=12 | |
| AF085348 | Trailer TGATTT, Position 1544 Mus musculus proline-rich protein (Bprp) mRNA |
| GACTCCAGAG count=12 | |
| AF095936 | Trailer ACGACT, Position 348 Mus musculus succinate dehydrogenase Ip subunit mRNA |
| GCCATTGGTG count=12 | |
| D16432 | Trailer TAGCGG, Position 138 Mouse murine CD63 mRNA for murine homologue of CD63/ME491 |
| AF159427 | Trailer TAGCGG, Position 109 Mus musculus tetraspanin membrane protein CD63 mRNA |
| GGGAGCTGAG count=12 | |
| M30856 | Trailer ATGGTG, Position 1244 Mouse interleukin 2 receptor mRNA |
| TCGGGAGATT count=12 | |
| X70298 | Trailer GGCTGG, Position 1925 M.musculus sox-4 mRNA. |
| TGAAAAAAAA count=12 | |
| AB041616 | Trailer AAAAAA, Position 2420 Mus musculus brain cDNA |
| TGCACTCGGT count=12 | |
| D86370 | Trailer ACCCTC, Position 1456 mouse mRNA for megakaryocyte potentiating factor |
| TGCAGGAGGA count=12 | |
| U20326 | Trailer TGAAGC, Position 321 Mus musculus cellular nucleic acid binding protein mRNA |
| Z11871 | Trailer TGAAGC, Position 285 M.musculus mRNA for cellular nucleic acid binding protein. |
| Z11870 | Trailer TGCCTG, Position 285 M.musculus mRNA for cellular nucleic acid binding protein. |
| X63866 | Trailer TGCCTG, Position 285 Mus musculus mRNA for cellular nucleic acid binding protein. |
| TGGCTGGCCC count=12 | |
| AF144702 | Trailer CACTGA, Position 700 Mus musculus small zinc finger-like protein (Tim13) mRNA |
| TGGGAGCAGG count=12 | |
| AJ005790 | Trailer AGAATA, Position 1402 Mus musculus mRNA for PKL12 protein. |
| AF089869 | Trailer AGAATA, Position 1445 Mus musculus serine/threonine kinase 16 (Stk16) mRNA |
| AB022179 | Trailer AGAATA, Position 1400 Mus musculus mRNA for F5-2 |
| AB017197 | Trailer AGAATA, Position 1416 Mus musculus mRNA for EDPK |
| TGTAACTTAA count=12 | |
| AF181116 | Trailer TGGCAA, Position 823 Mus musculus brain protein 44-like protein (Brp44l) mRNA |
| TGTAATTTCT count=12 | |
| AB025406 | Trailer TCTCTA, Position 1339 Mus musculus mRNA for sid23p |
| TGTGTGTTAT count=12 | |
| Y10874 | Trailer CAGCAA, Position 667 M.musculus mRNA for proteasome subunit MC14. |
| D83585 | Trailer CAGCAA, Position 653 Mouse mRNA for proteasome Z subunit |
| TTCTCTGCCT count=12 | |
| AF162768 | Trailer ATATCA, Position 531 Mus musculus actin-related protein complex 1b (Arpc1b) mRNA |
| AAAATGTTCA count=11 | |
| U42386 | Trailer ATCTTT, Position 1065 Mus musculus fibroblast growth factor inducible gene 14 (FIN14) |
| AAACGTGGCT count=11 | |
| M61007 | Trailer GAGCGC, Position 1108 Mouse alpha-1-acid glycoprotein (AGP/EBP) mRNA |
| X62600 | Trailer GAGCGC, Position 1199 M.musculus mRNA for C/EBP beta. |
| AAGGCCTTTC count=11 | |
| D30687 | Trailer TGTCCT, Position 616 Mouse mRNA for preadipocyte growth factor (glutathione |
| X53451 | Trailer TGTCCT, Position 575 Mouse mRNA for glutathione S-transferase II (EC 2.5.1.18). |
| ACTCCTTTTG count=11 | |
| M16229 | Trailer AGGAAA, Position 967 Mouse mitochondrial malate dehydrogenase (mMDH) mRNA |
| ATCCAGTCCA count=11 | |
| X15358 | Trailer ACGGGC, Position 349 Mouse mRNA for junD proto-oncogene. |
| CAAGTCATGA count=11 | |
| J02583 | Trailer TTTGAA, Position 1168 Mouse cysteine proteinase mRNA |
| X06086 | Trailer TTTGAA, Position 1177 Mouse mRNA for major excreted protein (MEP). |
| AF121839 | Trailer TTTGAA, Position 1155 Mus musculus cell-line LXB2 cathepsin L mRNA |
| AF121838 | Trailer TTTGAA, Position 1155 Mus musculus cell-line LXA1 cathepsin L mRNA |
| AF121837 | Trailer TTTGAA, Position 1155 Mus musculus cell-line L929 cathepsin L mRNA |
| CACCGAAGGA count=11 | |
| AF102817 | Trailer CATTAG, Position 798 Mus musculus nuclear LIM-only 4 protein (Lmo4) mRNA |
| CAGAACAGTA count=11 | |
| U14172 | Trailer CAGCGT, Position 4765 Mus musculus p162 protein mRNA |
| CCATATCCCT count=11 | |
| AB037370 | Trailer GTGAAA, Position 1492 Mus musculus Copz1 mRNA for nonclathrin coat protein zeta-COP |
| CCTCCCAGAA count=11 | |
| X53337 | Trailer ACCTGC, Position 1584 Mouse mRNA for cathepsin D (EC 3.4.23.5). |
| X52886 | Trailer ACCTGC, Position 1644 M.musculus mRNA for cathepsin D. |
| CGGATTGGAG count=11 | |
| D31717 | Trailer CCAATG, Position 1691 Mouse MARib mRNA for ribophorin |
| CTGGGGTTTA count=11 | |
| U69270 | Trailer TACCTA, Position 2119 Mus musculus nuclear LIM interactor (NLI) mRNA |
| CTGTGGTGGT count=11 | |
| D26177 | Trailer GGCAGG, Position 3036 Mouse mRNA for D-factor/LIF receptor |
| GATGAGAATA count=11 | |
| AF036898 | Trailer TATGAA, Position 1584 Mus musculus DNA polymerase epsilon small subunit mRNA |
| GCAAGTGACA count=11 | |
| L13129 | Trailer CGAGTG, Position 1374 Mus musculus synexin mRNA |
| TAAAAACTCA count=11 | |
| U89876 | Trailer TGTAAA, Position 950 Mus musculus transcriptional coactivator ALY (ALY) mRNA |
| TATCCAATGG count=11 | |
| U30839 | Trailer GAGGTC, Position 1084 Mus musculus voltage dependent anion channel 3 mRNA |
| TGACATTTGA count=11 | |
| D87903 | Trailer CACGAA, Position 1223 Mouse mRNA for ARF6 |
| TGATTTGCTA count=11 | |
| Y00094 | Trailer GTTCTT, Position 1185 Mouse mRNA for ras-related YPT1 protein. |
| TGCATCCCCA count=11 | |
| AF225564 | Trailer AAAGCA, Position 1021 Mus musculus aldehyde reductase (Akr1A4) mRNA |
| TGTGGATGGG count=11 | |
| AF033114 | Trailer AAGGCG, Position 443 Mus musculus strain C57BL/6J Siva-1 mRNA |
| AF033113 | Trailer AAGGCG, Position 356 Mus musculus Siva-1 mRNA |
| AF033112 | Trailer AAGGCG, Position 161 Mus musculus Siva-2 mRNA |
| TTGGATAAAA count=11 | |
| U27315 | Trailer CCAGAC, Position 1064 Mus musculus adenine nucleotide translocase-1 (Ant1) mRNA |
| X74510 | Trailer CCAGAC, Position 1071 M.musculus ANC1 mRNA for adenine nucleotide carrier. |
| TTTATTTGGA count=11 | |
| U04354 | Trailer TTGGCA, Position 2034 Mus musculus ADSEVERIN mRNA |
| Y13971 | Trailer TTGGCA, Position 1734 Mus musculus mRNA for adseverin(D5). |
| TTTTAGGATG count=11 | |
| AF062071 | Trailer TTTGGG, Position 844 Mus musculus zinc finger protein ZNF216 mRNA |
| AAGAATAAGA count=10 | |
| M29462 | Trailer CCTGGA, Position 954 Mouse malate dehydrogenase mRNA |
| ACATTGTGCC count=10 | |
| U39077 | Trailer ATATGA, Position 1446 Mus musculus thymopoietin gamma mRNA |
| U39076 | Trailer ATATGA, Position 1557 Mus musculus thymopoietin delta mRNA |
| U39075 | Trailer ATATGA, Position 1653 Mus musculus thymopoietin epsilon mRNA |
| U39074 | Trailer ATATGA, Position 1773 Mus musculus thymopoietin beta mRNA |
| ACTGACTCTT count=10 | |
| Y14196 | Trailer GGTCAA, Position 1560 Mus musculus mRNA for heterogeneous nuclear ribonucleoprotein H. |
| AGTCTATGAG count=10 | |
| D78188 | Trailer TCAATA, Position 2419 Mouse mRNA for SCID complementing gene 2. |
| ATGATAGCAG count=10 | |
| X53157 | Trailer CACAGA, Position 159 Mouse mRNA for mitochondrial cytochrome c oxidase subunit Vb. |
| ATTATAAAAA count=10 | |
| AB041566 | Trailer TCATAA, Position 890 Mus musculus brain cDNA |
| CAAATATTGT count=10 | |
| M73329 | Trailer CATAGC, Position 1352 Mouse phospholipase C-alpha (PLC-alpha) mRNA |
| CAGTGAGGAG count=10 | |
| AF156164 | Trailer CACCCG, Position 405 Mus musculus type I transmembrane protein Fn14 (Fn14) mRNA |
| CAGTTTTGGG count=10 | |
| U97170 | Trailer AAAGGA, Position 954 Mus musculus protein kinase inhibitor gamma (PKIg) mRNA |
| CATGCACTGA count=10 | |
| AF223953 | Trailer TGCTGT, Position 1777 Mus musculus ARL-6 interacting protein-1 mRNA |
| CCAACAATGC count=10 | |
| AF175574 | Trailer AGCCAT, Position 1054 Mus musculus 26S proteasome subunit S5a mRNA |
| AF013099 | Trailer AGCCAT, Position 1045 Mus musculus multiubiquitin-chain-binding protein (Mcb1) mRNA |
| AB029144 | Trailer AGCCAT, Position 1547 Mus musculus mRNA for pUb-R3 |
| AB029143 | Trailer AGCCAT, Position 1054 Mus musculus mRNA for pUb-R2 |
| AB029142 | Trailer AGCCAT, Position 1045 Mus musculus mRNA for pUb-R1 |
| CCACCTCATC count=10 | |
| X53476 | Trailer TCATTT, Position 449 Mouse mRNA for non-histone chromosomal protein HMG-14. |
| CCATACAATG count=10 | |
| M64641 | Trailer CCGCCC, Position 1393 Mouse Mov-34 protein mRNA |
| CCCACCAGCC count=10 | |
| AF106967 | Trailer ACCCCC, Position 216 Mus musculus I3 protein mRNA |
| CTATAAGTAA count=10 | |
| Y08460 | Trailer CCCCAA, Position 1750 Mus musculus mRNA for Mdes transmembrane protein. |
| CTCATCATCG count=10 | |
| X82438 | Trailer CGGGTA, Position 1263 M.musculus mRNA for monocarboxyalate transporter. |
| AF058055 | Trailer CGGGTA, Position 1452 Mus musculus monocarboxylate transporter 1 (mMCT1) mRNA |
| CTTGCAATAC count=10 | |
| AB041651 | Trailer CCTGTG, Position 1362 Mus musculus brain cDNA |
| GTCGTGACAG count=10 | |
| X65627 | Trailer ATACTC, Position 1634 M.musculus mRNA TNZ2 for p68 RNA helicase. |
| TATTGAGCCC count=10 | |
| D87909 | Trailer CCTCTC, Position 822 Mus musculus mRNA for PA28 alpha subunit |
| TATTTAAGAG count=10 | |
| AF049890 | Trailer TTTAAT, Position 1643 Mus musculus tyrosylprotein sulfotransferase-2 mRNA |
| TCCAACATTT count=10 | |
| L25913 | Trailer TGGAGG, Position 1497 Mus musculus chaperonin mRNA |
| Z31554 | Trailer TGGAGG, Position 1658 M.musculus (129/Sv) Cctd mRNA for CCT (chaperonin containing TCP-1) |
| TCGCTATAAT count=10 | |
| M63286 | Trailer AGTGAA, Position 1839 Mouse man 6-P receptor (46MPR) mRNA |
| X64068 | Trailer AGTGAA, Position 1934 M.musculus mRNA for cation-dependent mannose-6-phosphate receptor. |
| X64070 | Trailer AGTGAA, Position 9630 M.musculus gene for cation-dependent mannose-6-phosphate receptor. |
| TCTGAGTTCG count=10 | |
| M17534 | Trailer AGGCCA, Position 1367 Mouse T-cell membrane glycoprotein (Ly-3) mRNA |
| L42996 | Trailer AGGCCA, Position 2501 Mus musculus nuclear-encoded mitochondrial acyltransferase mRNA |
| TCTGTGAGTT count=10 | |
| M86671 | Trailer TGAGGA, Position 1739 Mus musculus interleukin 12 p40 subunit |
| U07890 | Trailer AAAAAA, Position 2556 Mus musculus C57BL/6J epidermal surface antigen (mesa) mRNA |
| AF096285 | Trailer TACAAG, Position 1549 Mus musculus serine-threonine kinase receptor-associated protein |
| TGATGTATGC count=10 | |
| M13441 | Trailer CAAGCG, Position 1229 Mouse alpha-tubulin isotype M-alpha-6 mRNA |
| TGCCTGCCTC count=10 | |
| AF205540 | Trailer TTCCTC, Position 2690 Mus musculus intestinal low-affinity peptide transporter protein |
| TGGATTTAAT count=10 | |
| D87902 | Trailer TTGGTT, Position 858 Mouse mRNA for ARF5 |
| TTCTCTATGA count=10 | |
| D78355 | Trailer AAACAT, Position 1191 Mus musculus TRA1 mRNA |
| D78354 | Trailer AAACAT, Position 982 Mus musculus TRA1 mRNA |
| AF159593 | Trailer AAACAT, Position 1388 Mus musculus phospholipid scramblase 1 mRNA |
| TTGCACCCCA count=10 | |
| AB021122 | Trailer AACTGG, Position 989 Mus musculus Tim23 mRNA for translocase of inner mitochondrial |
| TTGGTCACAG count=10 | |
| AB035383 | Trailer , Position 1169 Mus musculus mRNA for SRp25 nuclear protein |
| TTTAGTAGGT count=10 | |
| U73445 | Trailer TTGAAC, Position 1752 Mus musculus dihydrolipoamide dehydrogenase (Dld) mRNA |
| AAACAGCTGT count=9 | |
| U90123 | Trailer ACCTCA, Position 1007 Mus musculus HN1 (Hn1) mRNA |
| AAGGAAATAA count=9 | |
| X80937 | Trailer ATTCAA, Position 3622 M.musculus mRNA for RIP1 protein. |
| ACAAAGTTTG count=9 | |
| L01062 | Trailer AGAATG, Position 1547 Mouse ATP synthase alpha subunit |
| ACAGCAGTAA count=9 | |
| AB041555 | Trailer ATGTGA, Position 1903 Mus musculus brain cDNA |
| ACCAATGCCT count=9 | |
| M13444 | Trailer GTTTTG, Position 899 Mouse alpha-tubulin isotype M-alpha-4 mRNA |
| ACTTTATTTG count=9 | |
| L16846 | Trailer CTAGGG, Position 1079 Mus musculus B-cell translocation gene-1 protein (BTG1) mRNA |
| AGACAAATGT count=9 | |
| AF073992 | Trailer GTCTGC, Position 1816 Mus musculus heterogenous nuclear ribonucleoprotein U (hnRNP U) |
| AGGTAGAGAG count=9 | |
| AF063847 | Trailer AGCTTG, Position 706 Mus musculus Smt3A protein mRNA |
| AGTTTGCTCA count=9 | |
| AF093671 | Trailer C , Position 1095 Mus musculus peroxisomal biogenesis factor (Pex11b) mRNA |
| ATCACTAGCA count=9 | |
| AF157497 | Trailer GATGTC, Position 1184 Mus musculus unknown mRNA. |
| ATGCACTGGG count=9 | |
| J04179 | Trailer TTGGCT, Position 994 Mouse chromatin nonhistone high mobility group protein (HGM-I(Y) |
| ATGTTTTGCT count=9 | |
| AF057287 | Trailer ACAGTT, Position 1549 Mus musculus RAB/Rip protein mRNA |
| CAAAGACGCT count=9 | |
| AJ297390 | Trailer AGATGT, Position 3351 Mus musculus mRNA for twisted gastrulation protein (tsg gene). |
| CCAAATTTGA count=9 | |
| U77128 | Trailer AGTCAT, Position 296 Mus musculus mitochondrial ATP synthase coupling factor 6 mRNA |
| CCAGGAAAGT count=9 | |
| AF033353 | Trailer TCTAAT, Position 1014 Mus musculus ubiquitin-homology domain protein (Ubl1) mRNA |
| CCTCTGGGTC count=9 | |
| U16741 | Trailer ATGTCT, Position 1249 Mus musculus capping protein alpha 2 subunit mRNA |
| CCTGGAGTGA count=9 | |
| X59047 | Trailer CCAGAG, Position 705 M.musculus MD3 mRNA. |
| CTAAAGAAAG count=9 | |
| M73963 | Trailer ATTACG, Position 2195 Mus musculus UCR-motif DNA-binding protein (UCRBP) mRNA |
| CTAACCTAAG count=9 | |
| M32017 | Trailer ATGCCT, Position 960 Mouse lysosomal membrane glycoprotein type B (lgp-B) mRNA |
| J05287 | Trailer ATGCCT, Position 1600 Mouse lysosomal membrane glycoprotein (LAMP-2) mRNA |
| CTACTAATAA count=9 | |
| M83741 | Trailer AACAAG, Position 649 Mouse cofactor mRNA. |
| CTCAACTCCT count=9 | |
| AF221713 | Trailer GCACAG, Position 2466 Mus musculus huntingtin interacting protein 1 related mRNA |
| CTCACCTTTG count=9 | |
| L04128 | Trailer ACCAGC, Position 383 Mus musculus ribosomal protein L18 (rpL18) mRNA |
| CTCTTCCACG count=9 | |
| Y00516 | Trailer AGACAC, Position 308 Mouse mRNA for aldolase A. |
| CTGAGGACAG count=9 | |
| X15487 | Trailer GAGAGG, Position 1533 Mouse mRNA for syndecan |
| CTGTGATGAC count=9 | |
| AB008895 | Trailer AATAAA, Position 3027 Mus musculus mRNA for mGpi1p |
| GAGGCCCAGC count=9 | |
| M19226 | Trailer CCGTGG, Position 207 Mouse 28S large subunit rRNA |
| GGAATGTGGT count=9 | |
| Z67746 | Trailer CACCAT, Position 757 M.musculus mRNA for phosphatase 2A catalytic subunit |
| GTCAGTGACA count=9 | |
| U21489 | Trailer GCTAGA, Position 1275 Mus musculus long-chain acyl-CoA dehydrogenase mRNA |
| GTTATTGCTC count=9 | |
| AB019212 | Trailer TTTCAT, Position 1431 Mus musculus mRNA for syntaxin 7 |
| TAAAGAAACA count=9 | |
| U95498 | Trailer CCAGAG, Position 1205 Mus musculus AF1q mRNA |
| AB000733 | Trailer CCAGAG, Position 1217 Mouse mRNA for AF1q |
| TACATCACAC count=9 | |
| AB038243 | Trailer TCTACA, Position 204 Mus musculus mRNA for Arp2/3 complex subunit p21-Arc |
| TACCACCCTA count=9 | |
| X97042 | Trailer ACATCG, Position 250 Mus musculus mRNA for UBcM4 protein. |
| AJ130961 | Trailer ACATCG, Position 239 Mus musculus mRNA for ubiquitin-conjugating enzyme. |
| TGCTGCAGCT count=9 | |
| U27455 | Trailer AAAGTA, Position 1618 Mus musculus serine palmitoyltransferase LCB2 subunit mRNA |
| X95642 | Trailer AAAGTA, Position 1621 M.musculus mRNA for serine palmitoyltransferase subunit B. |
| TTTGTATCGA count=9 | |
| AF140599 | Trailer ATGTCA, Position 168 Mus musculus ring-box protein 1 (Rbx1) mRNA |
| AACAGCGTTG count=8 | |
| AF271072 | Trailer CCTTCC, Position 880 Mus musculus TGF-beta receptor interacting protein 1 mRNA |
| AF188297 | Trailer CCTTCC, Position 903 Mus musculus TGF-beta receptor binding protein (Trip1) mRNA |
| AAGCAGCGAG count=8 | |
| Z14049 | Trailer AGGCTG, Position 759 M.musculus mRNA for 3 |
| AATGGCTTTG count=8 | |
| M35248 | Trailer ATGCAG, Position 1561 Mouse MHC class I H2-TL-T9-c mRNA (d haplotype) |
| M35247 | Trailer ATGCAG, Position 1642 Mouse MHC class I H2-TL-T17-c mRNA (d haplotype) |
| M35244 | Trailer ATGCAG, Position 1643 Mouse MHC class I H2-TL-T10-129 mRNA (b haplotype) |
| M35246 | Trailer ATGCAG, Position 1567 Mouse MHC class I H2-TL-T10-b mRNA (b haplotype) |
| M35245 | Trailer ATGCAG, Position 1680 Mouse MHC class I H2-TL-27-b mRNA (b haplotype) |
| M35243 | Trailer ATGCAG, Position 1649 Mouse MHC class I H2-TL-27-129 mRNA (b haplotype) |
| ACTTCCTCGG count=8 | |
| X65021 | Trailer ATATTT, Position 874 M.musculus mRNA for glutathione S-transferase. |
| AGAAGGAAGA count=8 | |
| L06896 | Trailer GAAACA, Position 2103 Mouse mRNA sequence. |
| D11089 | Trailer GAAACA, Position 2106 Mus musculus mRNA for p66 mot1 |
| AGCTGCTCAC count=8 | |
| AF093418 | Trailer GCTGAT, Position 1527 Mus musculus maleylacetoacetate isomerase mRNA |
| AGCTTAAATT count=8 | |
| X92665 | Trailer TGTATA, Position 999 M.musculus mRNA for ubiquitin-conjugating enzyme UbcM3. |
| AGGAGCTGGA count=8 | |
| D86609 | Trailer GAGAAA, Position 137 Mouse mRNA for RPA16 |
| AGTGGCTGTT count=8 | |
| U30838 | Trailer TTAAGA, Position 1364 Mus musculus voltage dependent anion channel 2 mRNA |
| ATAGTGGACG count=8 | |
| D83966 | Trailer TTGTTA, Position 7643 Mouse mRNA for protein tyrosine phosphatase |
| D28529 | Trailer TTGTTA, Position 4857 Mouse mRNA for protein tyrosine phosphatase DPZPTP |
| Z32740 | Trailer TTGTTA, Position 7606 M.musculus mRNA for protein tyrosine phosphatase PTP-BL. |
| ATCCAGAGGA count=8 | |
| U43548 | Trailer AATTAA, Position 1865 Mus musculus transcription factor like protein 4 TCFL4 mRNA |
| ATGGCAAAGG count=8 | |
| U39302 | Trailer ATGACC, Position 1157 Mus musculus 26S proteasome subunit 4 ATPase mRNA |
| ATTAACGGGA count=8 | |
| M55272 | Trailer GACTGT, Position 42 Mouse precursor 18S ribosomal RNA |
| ATTGTCACTG count=8 | |
| M88694 | Trailer ACTACA, Position 251 Mus musculus thioether S-methyltransferase mRNA |
| ATTTTGTAAA count=8 | |
| D50463 | Trailer GTACAG, Position 1241 Mouse SDR1 mRNA |
| CAAACACACA count=8 | |
| M34857 | Trailer CTAGGA, Position 936 Mouse Hox-2.5 mRNA. |
| CAAAGTTGGC count=8 | |
| U94402 | Trailer CAGCAT, Position 1045 Mus musculus ubiquitin conjugating enzyme UBC9 mRNA |
| CACGGACACC count=8 | |
| AF193794 | Trailer AAGTTA, Position 313 Mus musculus vacuolar sorting protein VPS29 mRNA |
| CACTGCTGGA count=8 | |
| AF192558 | Trailer AGTACC, Position 1186 Mus musculus domesticus mitochondrial carrier homolog 1 isoform b |
| AF176007 | Trailer AGTACC, Position 1135 Mus musculus domesticus mitochondrial carrier homolog 1 isoform a |
| CATCCAAAAA count=8 | |
| AF020185 | Trailer CAAGGA, Position 397 Mus musculus protein inhibitor of nitric oxide synthase (PIN) mRNA |
| CCCATCTCCA count=8 | |
| AB030190 | Trailer TCAACA, Position 953 Mus musculus mRNA |
| CCGGGCAATG count=8 | |
| AF055638 | Trailer CTTTCA, Position 991 Mus musculus unknown mRNA. |
| CCTTCTTTTA count=8 | |
| AF069519 | Trailer ATAATT, Position 1245 Mus musculus T:G mismatch-specific thymine-DNA glycosylase TDGb |
| CGAGATATAC count=8 | |
| U20532 | Trailer GCAGGA, Position 1716 Mus musculus p45 NF-E2 related factor 2 (Nrf 2) mRNA |
| CTAGCTCAGA count=8 | |
| M26071 | Trailer GAGGCT, Position 1115 Mouse tissue factor (mtf) mRNA |
| CTCAGTCACA count=8 | |
| L57509 | Trailer CACCCC, Position 3347 Mus musculus Cak receptor kinase mRNA |
| AF026259 | Trailer CACCCC, Position 3331 Mus musculus receptor-like tyrosine kinase (Nep) mRNA |
| CTGAATGACG count=8 | |
| AF118128 | Trailer TTCAGG, Position 1194 Mus musculus nuclear RNA helicase Bat1 mRNA |
| CTGTAATTAT count=8 | |
| AJ132616 | Trailer AGTCTC, Position 811 Mus musculus mRNA for HIRA-interacting protein (HIRIP5). |
| CTTTTGACAA count=8 | |
| M76131 | Trailer CAGCAG, Position 697 Mouse elongation factor 2 (ef-2) mRNA |
| GAGCGCATGG count=8 | |
| M12573 | Trailer TGCAGG, Position 300 Mouse heat shock protein (hsp68) mRNA |
| M12572 | Trailer TGCAGG, Position 417 Mouse heat shock protein (hsp68) mRNA |
| M12571 | Trailer TGCAGG, Position 879 Mouse heat shock protein (hsp68) mRNA |
| GGCCGGGGCT count=8 | |
| X61431 | Trailer CTTGGA, Position 189 M.musculus mRNA for diazepam-binding inhibitor. |
| GTAAACTACT count=8 | |
| U70736 | Trailer TGAGCT, Position 823 Mus musculus 38 kDa Mov34 homolog mRNA |
| AF068223 | Trailer TGAGCT, Position 815 Mus musculus Kip1 C-terminus interacting protein-2 (Kic2) mRNA |
| AF065386 | Trailer TGAGCT, Position 800 Mus musculus Jun coactivator Jab1 (Jab1) mRNA |
| TCAGAACACA count=8 | |
| U16740 | Trailer CAGGTA, Position 2544 Mus musculus capping protein alpha 1 subunit mRNA |
| TCCCTGAGTT count=8 | |
| X06115 | Trailer CGAGGC, Position 3867 Mouse mRNA for E-cadherin (= uvomorulin |
| AF284437 | Trailer CCATCA, Position 1924 Mus musculus TIGIRR-1 mRNA |
| AF176531 | Trailer CCCCTC, Position 960 Mus musculus F-box protein FBX16 mRNA |
| TCCTTGGAGT count=8 | |
| U09192 | Trailer CTCAAG, Position 721 Mus musculus thymic shared antigen-1 mRNA |
| U04268 | Trailer CTCAAG, Position 696 Mus musculus C57BL/6 Sca-2 precursor mRNA |
| TGACCACATG count=8 | |
| Z16406 | Trailer TCCTAC, Position 258 Mus musculus Mox-2A mRNA. |
| TGATAAAATT count=8 | |
| M12899 | Trailer ACACCC, Position 1644 Mouse t complex polypeptide 1 (Tcp-1-b) mRNA |
| M20130 | Trailer ACACCC, Position 709 Mouse t complex polypeptide 1 (Tcp-1-a) mRNA |
| D90344 | Trailer ACACCC, Position 1637 Mouse mRNA for t-complex polypeptide 1A (Tcp-1a) |
| TGCATGTCTT count=8 | |
| U17961 | Trailer CATTGA, Position 787 Mus musculus p62 mRNA |
| U17046 | Trailer CATTGA, Position 776 Mus musculus p62 ras-GAP associated phosphoprotein mRNA |
| TGGACTGGTG count=8 | |
| D14883 | Trailer TTTCTT, Position 1522 Mouse mRNA for C33/R2/IA4 |
| TGGGACCTTG count=8 | |
| AL355719 | Trailer ACGAGA, Position 469 Mus musculus mRNA full length insert cDNA clone EUROIMAGE 657748. |
| TGGTATGAAC count=8 | |
| U51167 | Trailer ATCGGC, Position 1085 Mus musculus isocitrate dehydrogenase mRNA |
| TTAAACCCAA count=8 | |
| U35142 | Trailer AGTATG, Position 1530 Mus musculus retinoblastoma-binding protein (mRbAp46) mRNA |
| TTACTTCATC count=8 | |
| AB032196 | Trailer CAGT , Position 1544 Mus musculus mRNA for zinc finger transcription factor ZNF207 |
| AB013357 | Trailer AAGTCT, Position 1492 Mus musculus mRNA for 49 kDa zinc finger protein |
| TTCTGCTTGT count=8 | |
| L17306 | Trailer CAGTGG, Position 361 Mouse peripheral-type benzodiazepine receptor mRNA |
| TTGTGGATTC count=8 | |
| U76960 | Trailer GTTAGT, Position 838 Mus musculus domesticus CDC42 protein (CDC42) mRNA |
| U37720 | Trailer GTTAGT, Position 1950 Mus musculus CDC42 mRNA |
| TTTGTGATGG count=8 | |
| AJ007972 | Trailer AATAAA, Position 3270 Mus musculus mRNA for GTPI protein. |
| TTTGTTTATC count=8 | |
| AF092877 | Trailer TGTACC, Position 607 Mus musculus zinc RING finger protein SAG mRNA |
| AAAGAGCACA count=7 | |
| AF042822 | Trailer CTGGGG, Position 2606 Mus musculus epithin mRNA |
| AAAGGTACGG count=7 | |
| AF114170 | Trailer GCGCTC, Position 1143 Mus musculus nucleotide-binding protein long form (Nubp1) mRNA |
| AAATAGCACA count=7 | |
| X75285 | Trailer GAAAGG, Position 4355 M.musculus mRNA for fibulin-2. |
| AAATATGTGG count=7 | |
| U50631 | Trailer AGATTT, Position 1019 Mus musculus heat-responsive protein (HRP12) mRNA |
| AACAAGCAGA count=7 | |
| U95736 | Trailer CCCCAA, Position 444 Mus musculus frataxin mRNA |
| AF223569 | Trailer CCGCAA, Position 316 Mus musculus frataxin pseudogene |
| AACCTGAGGA count=7 | |
| Z54219 | Trailer AAATTG, Position 1029 M.musculus mRNA for mSUG1. |
| AAGAAGGAGG count=7 | |
| AF062655 | Trailer TGGGAA, Position 2484 Mus musculus plenty-of-prolines-101 mRNA |
| AAGGTCCACT count=7 | |
| U29530 | Trailer TAGTGG, Position 254 Mus musculus clone TA-9 ATP synthase b chain homolog mRNA |
| AAGGTCCTAA count=7 | |
| M28723 | Trailer AATTTC, Position 1215 Mus musculus housekeeping-type protein (MER5) mRNA |
| AAGTATGCAT count=7 | |
| AB003502 | Trailer TGCGCG, Position 1501 Mus musculus mRNA for Guanine Nucleotide Regulatory Protein |
| AATGGATTGT count=7 | |
| AB041664 | Trailer TTTTAA, Position 1434 Mus musculus brain cDNA |
| ACATAAAACA count=7 | |
| AF234625 | Trailer GATTTG, Position 1908 Mus musculus pre-B-cell colony-enhancing factor mRNA |
| AGCAAACTTA count=7 | |
| AF179566 | Trailer AGACAT, Position 3044 Mus musculus p130Cas-binding protein AND34-1 (And34) mRNA |
| AGCATTCTTG count=7 | |
| U83628 | Trailer AGCTGG, Position 434 Mus musculus defender against cell death 1 protein (DAD1) mRNA |
| AGCGTGTAGC count=7 | |
| AF042491 | Trailer CATGCT, Position 983 Mus musculus putative membrane associated progesterone receptor |
| AGGACTTGGT count=7 | |
| X62154 | Trailer GAAGCT, Position 2478 M. musculus mRNA for P1 protein (P1.m). |
| AGGAGTTCAA count=7 | |
| AB016257 | Trailer GGTCAT, Position 1888 Mus musculus mRNA for OCTN1 |
| AGGCCTTTAG count=7 | |
| U27340 | Trailer AGCGAT, Position 2059 Mus musculus sulfated glycoprotein (Sgp1) mRNA |
| AGGTAACTGC count=7 | |
| U64450 | Trailer TTGCTA, Position 542 Mus musculus nucleophosmin/nucleoplasmin-3 (Npm3) mRNA |
| AGTGTTTAAA count=7 | |
| U07617 | Trailer TAAAAA, Position 2341 Mus musculus Grb2 adaptor protein (grb2) mRNA |
| D85748 | Trailer TAAAAA, Position 2216 Mouse mRNA for Grb3-3 |
| ATAAAAGTTC count=7 | |
| AF169300 | Trailer TATTAC, Position 2678 Mus musculus ring finger protein 4 (Rnf4) mRNA |
| ATAGCTCTAG count=7 | |
| AB012693 | Trailer CAGAAC, Position 957 Mus musculus mRNA for CD47 |
| ATGAAGGTGG count=7 | |
| M18091 | Trailer TTTTCC, Position 28 Mouse U1b-2 small nuclear RNA (uRNA). |
| ATGATGGAGA count=7 | |
| AB025407 | Trailer AGGTGA, Position 408 Mus musculus mRNA for sid2057p |
| ATGTATAGAT count=7 | |
| AF097512 | Trailer TTCAGA, Position 1867 Mus musculus peroxisomal protein (Pex14) mRNA |
| ATTGAGAGCA count=7 | |
| AF078840 | Trailer AGCGAG, Position 601 Mus musculus 5'(3')-deoxyribonucleotidase (Nt) mRNA |
| CACATGCGTG count=7 | |
| AF141312 | Trailer TAGCAG, Position 222 Mus musculus hypoxia induced gene 1 (Hig1) mRNA |
| CAGTTGTCAA count=7 | |
| D85904 | Trailer GACAAA, Position 2296 Mouse mRNA for apg-2 |
| CCACTGGTTA count=7 | |
| AF004106 | Trailer GGAATA, Position 1082 Mus musculus unknown mRNA |
| CCGCCCGTCA count=7 | |
| AF052621 | Trailer GCTCTT, Position 940 Mus musculus hypothetical protein COX4AL (COX4AL) mRNA |
| CCTCTGTACA count=7 | |
| AF155373 | Trailer GCATCC, Position 2998 Mus musculus nuclear factor kappa B subunit p100 (Nfkb2) mRNA |
| AF155372 | Trailer GCATCC, Position 2961 Mus musculus nuclear factor kappa B subunit p100 (Nfkb2) mRNA |
| CCTGAGTTCA count=7 | |
| U58884 | Trailer AGGCCA, Position 2218 Mus musculus SH3-containing protein SH3P7 mRNA |
| CGAGAAAACA count=7 | |
| Z71189 | Trailer TGGCCA, Position 1867 M.musculus mitochondrial mRNA for very-long-chain acyl-CoA |
| U41497 | Trailer TGGCCA, Position 828 Mus musculus very-long chain acyl-CoA dehydrogenase mRNA |
| AF017176 | Trailer TGGCCA, Position 1594 Mus musculus very-long-chain acyl-CoA dehydrogenase mRNA |
| CGCTTGGCAG count=7 | |
| U13393 | Trailer CCATTC, Position 579 Mus musculus delta proteasome subunit mRNA |
| CTCAAGTACA count=7 | |
| U45978 | Trailer GTGAGT, Position 1215 Mus musculus calcium-binding protein Cab45b mRNA |
| D50461 | Trailer GTGAGT, Position 1442 Mouse SDF4 mRNA |
| CTGAGAAAAG count=7 | |
| K02927 | Trailer CGGGGC, Position 2453 Mouse ribonucleotide reductase subunit M1 mRNA |
| CTGGACAGCA count=7 | |
| X61506 | Trailer GCAACA, Position 1398 Mouse E46 mRNA for E46 protein. |
| CTGGTTCCCC count=7 | |
| AF079971 | Trailer ATTTGG, Position 1449 Mus musculus cytohesin-2 mRNA |
| GACCAGATGT count=7 | |
| M91602 | Trailer TCGCAG, Position 441 M.musculus myosin light chain 2 mRNA |
| GCACTCGTGA count=7 | |
| AF176514 | Trailer GATTCT, Position 761 Mus musculus E2F1-inducible protein (Eig2) mRNA |
| GCCCTCTACA count=7 | |
| X80899 | Trailer TGGCCT, Position 323 M.musculus mRNA for cytochrome C oxidase subunit VII homologue. |
| GTGGCATTAG count=7 | |
| AF035644 | Trailer AGGGAA, Position 704 Mus musculus potentially prenylated protein tyrosine phosphatase |
| GTTCCCCCCT count=7 | |
| U55060 | Trailer CTGTGG, Position 1260 Mus musculus beta-galactoside binding lectin mRNA |
| TAAACAAAAA count=7 | |
| X81464 | Trailer AAAAAA, Position 912 M.musculus mRNA for translin. |
| TAAAGTCTAC count=7 | |
| AF034092 | Trailer TTTCCA, Position 790 Mus musculus nuclear localization signal containing protein (Nlvcf) |
| TACACAGTGA count=7 | |
| AF010305 | Trailer GGAAAA, Position 2699 Mus musculus Stra13 mRNA |
| TACATTGGGT count=7 | |
| D78643 | Trailer GTGGGG, Position 1419 Mouse seizure-related mRNA |
| TACTTAAAAA count=7 | |
| X62940 | Trailer CTGCTT, Position 1399 M.musculus TSC-22 mRNA. |
| TAGAATTCAT count=7 | |
| U70538 | Trailer TGTTTT, Position 2591 Mus musculus UDP-GalNAc:polypeptide |
| TCAGGCTGAG count=7 | |
| Y08219 | Trailer CAAAAT, Position 961 M.musculus mRNA for cp27 gene. |
| AB010828 | Trailer CAAAAT, Position 962 Mus musculus mRNA for BCNT |
| TCTAAAAAAA count=7 | |
| X78682 | Trailer AAA , Position 984 M.musculus mRNA for B-cell receptor associated protein (BAP) 32. |
| TGAGGAGCAG count=7 | |
| AF076607 | Trailer ATGATG, Position 2183 Mus musculus prediabetic NOD sera-reactive autoantigen mRNA |
| TGATACCCTC count=7 | |
| M31448 | Trailer TTCCGG, Position 43 Mouse B2 repetitive sequence mRNA |
| TGGACCTAAT count=7 | |
| U69898 | Trailer AAAACA, Position 1734 Mus musculus translocase of inner mitochondrial membrane (Tim44) |
| TGGGGTAGAT count=7 | |
| M92988 | Trailer TCTGAT, Position 1440 Mouse calregulin (ERp60) mRNA |
| TGTAGACAGA count=7 | |
| Y17676 | Trailer ATCTCT, Position 191 Mus musculus unknown mRNA |
| TGTCACGATT count=7 | |
| AJ250491 | Trailer CTGTGT, Position 1034 Mus musculus mRNA for receptor activity modifying protein 3 (Ramp3 |
| AF209907 | Trailer CTGTGT, Position 993 Mus musculus receptor activity modifying protein 3 mRNA |
| AF146524 | Trailer CTGTGT, Position 1034 Mus musculus receptor activity modifying protein 3 (Ramp3) mRNA |
| TGTTTTGTAC count=7 | |
| U64033 | Trailer TTTTTA, Position 2637 Mus musculus Tera (Tera) mRNA |
| TTCCTGGTAA count=7 | |
| AB028920 | Trailer TTGTTA, Position 2346 Mus musculus AKAP95 mRNA for A kinase anchor protein 95 |
| TTGGAGGAGA count=7 | |
| AF022223 | Trailer TTGACA, Position 924 Mus musculus Bcl-2-binding protein (BAG-1) mRNA |
| TTGTTGGAGG count=7 | |
| AF118650 | Trailer ATTGGA, Position 958 Mus musculus PKCq-interacting protein PICOT (PICOT) mRNA |
| TTTAATAAAT count=7 | |
| AF035939 | Trailer GCGATA, Position 593 Mus musculus Magoh mRNA |
| AAAAACTACA count=6 | |
| AF222801 | Trailer ATAAAC, Position 1761 Mus musculus traube mRNA |
| AACAAGAGCA count=6 | |
| AF202048 | Trailer CTGTAC, Position 1499 Mus musculus NM23-M7 (Nm23-M7) mRNA |
| AACCTGAGCG count=6 | |
| AB012580 | Trailer TGGAGA, Position 1530 Mus musculus mRNA for eIF3 p66 |
| AACTCTTTGT count=6 | |
| U72141 | Trailer TTTGGC, Position 2796 Mus musculus multiple exostoses 2 protein (EXT2) mRNA |
| U67837 | Trailer TTTGGC, Position 2792 Mus musculus multiple exostosis protein (EXT2) mRNA |
| AAGGAAGAGG count=6 | |
| AF062567 | Trailer AACCTG, Position 1479 Mus musculus transcription factor Sp3 mRNA |
| AAGGACGAGG count=6 | |
| U85089 | Trailer ACCAGC, Position 501 Mus musculus thioredoxin mRNA |
| AAGGGCGACA count=6 | |
| D63423 | Trailer CATCTG, Position 972 Mouse mRNA for annexin V |
| U29396 | Trailer CATCTG, Position 991 Mus musculus annexin V (Anx5) mRNA |
| AATAAGATGG count=6 | |
| X81443 | Trailer AATGGT, Position 823 M.musculus SIG-92 mRNA. |
| Y15522 | Trailer AATGGT, Position 747 Mus musculus mRNA for MNUDC protein. |
| AATGCTACTG count=6 | |
| U38940 | Trailer ACCCTT, Position 1721 Mus musculus asparagine synthetase mRNA |
| ACACCATGAC count=6 | |
| AB041657 | Trailer TGTAGT, Position 1368 Mus musculus brain cDNA |
| ACCACCCCTG count=6 | |
| Z31553 | Trailer TTAAGC, Position 1648 M.musculus (129/Sv) Cctb mRNA for CCT (chaperonin containing TCP-1) |
| AB041570 | Trailer TTAAGC, Position 1528 Mus musculus brain cDNA |
| ACCACGCTTG count=6 | |
| AB020886 | Trailer CAGTTG, Position 4915 Mus musculus mRNA for SSeCKS |
| ACCATGGCAA count=6 | |
| L38444 | Trailer AGGCTT, Position 1484 Mus musculus (clone U2) T-cell specific protein mRNA |
| U15636 | Trailer AGGCTT, Position 1490 Mus musculus GTP binding protein (GTP2) mRNA |
| ACCCCTCCTC count=6 | |
| M64298 | Trailer ATTCCA, Position 652 Mouse vacuolar H(+)-ATPase (mvp) mRNA |
| AGACAAGCCA count=6 | |
| AF072521 | Trailer GAGAGA, Position 1663 Mus musculus poly-(ADPribosyl)-transferase homolog PARP mRNA |
| AGACAGTTAA count=6 | |
| U67327 | Trailer ACTGTG, Position 400 Mus musculus WD40-repeat type I transmembrane protein A72.5 mRNA |
| AF149822 | Trailer ACTGTG, Position 349 Mus musculus mitotic checkpoint protein BUB3 (Bub3) mRNA |
| AGGATGGCTG count=6 | |
| U49112 | Trailer GATTCA, Position 567 Mus musculus calcium-binding protein ALG-2 (ALG-257) mRNA |
| X14938 | Trailer GATTCA, Position 397 Mouse mRNA for calcium-binding protein. |
| AGTTTCCTTG count=6 | |
| M14223 | Trailer ATTATT, Position 1992 Mouse ribonucleotide reductase M2 subunit mRNA |
| ATAAAAAAAA count=6 | |
| U69171 | Trailer AAAAAA, Position 1445 Mus musculus peroxisomal PTS2 receptor mRNA |
| ATATACAGGA count=6 | |
| AB027012 | Trailer GCAGTA, Position 1093 Mus musculus galK mRNA for galactokinase |
| ATCATCACTT count=6 | |
| AF157500 | Trailer CGACTC, Position 1399 Mus musculus acid ceramidase mRNA |
| ATCATGGCAA count=6 | |
| Z37164 | Trailer AACCAG, Position 1654 M.musculus Cctq mRNA encoding cytosolic chaperone containing TCP-1 |
| ATCGACACTT count=6 | |
| J01871 | Trailer CGAACG, Position 89 Mouse 5.8S ribosomal RNA. |
| ATCTGAACCT count=6 | |
| X65687 | Trailer GATGTT, Position 1791 M.musculus mRNA for serine-threonine protein kinase. |
| ATGCAGCAGA count=6 | |
| AF073297 | Trailer AGCAGA, Position 144 Mus musculus small EDRK-rich factor 2 (Serf2) mRNA |
| ATGTACAAGC count=6 | |
| X57024 | Trailer TGATGG, Position 1924 Murine GLUD mRNA for glutamate dehydrogenase. |
| ATGTGTACCC count=6 | |
| U92793 | Trailer AGGGGT, Position 3679 Mus musculus alpha glucosidase II alpha subunit mRNA |
| ATGTTGATTC count=6 | |
| Y00964 | Trailer TGAAAT, Position 1652 M musculus mRNA for beta-hexosaminidase. |
| ATTGTGGCCC count=6 | |
| AF116911 | Trailer CGCCCC, Position 1295 Mus musculus thymic dendritic cell-derived factor 1 mRNA |
| CAAGAGGATG count=6 | |
| AF106853 | Trailer ATGTGC, Position 527 Mus musculus beta-B1 crystallin mRNA |
| CACAGGAGGG count=6 | |
| AB033168 | Trailer TTCCAA, Position 4531 Mus musculus mRNA for nuclear protein ZAP |
| CAGCTCAGCC count=6 | |
| M74751 | Trailer AGGCCA, Position 1188 Mouse myosin heavy chain mRNA |
| M12290 | Trailer AGGCCA, Position 87 Mouse alpha-(V1) cardiac myosin heavy chain mRNA. |
| X97818 | Trailer CAGGTC, Position 3569 M.musculus mRNA for semaphorin G. |
| CAGGCCAAGT count=6 | |
| AF039405 | Trailer ACCTGG, Position 891 Mus musculus arsenite-translocating ATPase (ArsA) mRNA |
| CATCACTTCA count=6 | |
| U41751 | Trailer TGGAGA, Position 456 Mus musculus EI24 (EI24) mRNA |
| CCAAAAAAAA count=6 | |
| X64413 | Trailer AAAAAA, Position 1927 M.musculus mRNA for zinc-finger protein Zfp-37. |
| X52533 | Trailer AA , Position 1419 Mouse mRNA for male germ cell specific zinc finger protein. |
| AF176840 | Trailer AAAAAA, Position 1953 Mus musculus intestine N-acetylglucosamine 6-O-sulfotransferase |
| CCAGATAGCT count=6 | |
| AJ010483 | Trailer TGAAAA, Position 1125 Mus musculus mRNA for CtBP1 protein. |
| AB033122 | Trailer TGAAAA, Position 1177 Mus musculus CtBP1 mRNA for C-terminal binding protein 1 |
| CCAGGGCCTG count=6 | |
| X92346 | Trailer TCTCCC, Position 1749 M.musculus mRNA for CART1 protein. |
| AF233449 | Trailer TCTCCC, Position 1647 Mus musculus TNF receptor associated factor 4 (traf4) mRNA |
| CCATTACAGA count=6 | |
| D16580 | Trailer TGGTTG, Position 3633 Mouse mRNA for peptidylarginine deiminase |
| CCTAAGGGTA count=6 | |
| U73902 | Trailer TTGGTT, Position 887 Mus musculus emerin (Sta) mRNA |
| CCTACCTACA count=6 | |
| AF067395 | Trailer ACCCTA, Position 838 Mus musculus NIX (Nix) mRNA |
| CCTGTTCCCC count=6 | |
| AB012865 | Trailer TGAGAA, Position 619 Mus musculus mRNA for C184S protein |
| CGGCAGAAGG count=6 | |
| U85489 | Trailer ATGAGG, Position 1145 Mus musculus Ah receptor-interacting protein (AIP) mRNA |
| CTACACACCT count=6 | |
| AF038848 | Trailer ACCAGA, Position 560 Mus musculus transcriptional repressor SIN3B (Sin3B) mRNA |
| CTGCAAGGCT count=6 | |
| Z14252 | Trailer GTTAAA, Position 2314 M.musculus ASM-1 mRNA for acidic sphingomyelinase. |
| CTGCCTTAGG count=6 | |
| D67015 | Trailer GACTGG, Position 5286 Mouse mRNA for scg |
| CTTCTAAGTG count=6 | |
| X78989 | Trailer CCATGA, Position 448 M.musculus mRNA for testin. |
| CTTTCTTAAG count=6 | |
| D78641 | Trailer ATGCTG, Position 3938 Mouse mRNA for membrane glycoprotein |
| D78503 | Trailer ATGCTG, Position 991 Mus musculus seizure-related mRNA |
| GAAGCCTGTG count=6 | |
| Y08948 | Trailer TGTAAA, Position 747 Mus musculus mRNA; contains SIG41 antisense sequences. |
| GCTTGCATAT count=6 | |
| X54149 | Trailer TTTTAA, Position 1204 Mouse mRNA for MyD118 |
| GGTGTCACAA count=6 | |
| AB004305 | Trailer TGA , Position 4714 Mus musculus mRNA for mBLVR |
| GTAGCAGGAG count=6 | |
| AF041476 | Trailer GAAACA, Position 1174 Mus musculus BAF53a (Baf53a) mRNA |
| GTCAAATACA count=6 | |
| L20450 | Trailer TAGAAG, Position 439 Mus musculus DNA-binding protein mRNA |
| GTGGACGAGG count=6 | |
| X79233 | Trailer TGGCCC, Position 1737 M.musculus EWS mRNA. |
| GTTTCCCTTG count=6 | |
| AB025349 | Trailer CATGCC, Position 501 Mus musculus L2BP1/BAF mRNA for LAP2 binding protein 1 |
| TAGAAGGGAG count=6 | |
| M97200 | Trailer CTTCAC, Position 1455 Mus musculus erythroid krueppel-like transcription factor mRNA |
| TAGTTTGTTT count=6 | |
| X78304 | Trailer GGTGTA, Position 226 M. musculus (SRP9) signal recognition particle subunit mRNA |
| TATTAAAGAA count=6 | |
| U31758 | Trailer ACAATT, Position 1885 Mus musculus transcriptional regulator RPD3 homolog mRNA |
| TCAATGAAGT count=6 | |
| AF100927 | Trailer AGCTAA, Position 1846 Mus musculus apoptosis-inducing factor AIF (Aif) mRNA |
| TCAGCCCCCG count=6 | |
| AF116823 | Trailer TCCGTC, Position 1635 Mus musculus putative intracellular signaling protein (Trip6) mRNA |
| AF097511 | Trailer TCCGTC, Position 1533 Mus musculus zyxin related protein-1 (Zrp1) mRNA |
| TCAGCGCAAT count=6 | |
| X82786 | Trailer TACAGT, Position 9383 M.musculus mRNA for Ki-67. |
| TCCATTTGGG count=6 | |
| M74227 | Trailer TGACCC, Position 1114 Mouse cyclophilin C (cyp C) mRNA |
| TCCTCCTTAT count=6 | |
| AF176009 | Trailer TCCCCA, Position 803 Mus musculus domesticus mitochondrial carrier homolog 2 mRNA |
| TCTCAACTTT count=6 | |
| J00423 | Trailer AACTGG, Position 448 Mouse hypoxanthine phosphoribosyltransferase (hprt) mRNA |
| TCTCAGGCCA count=6 | |
| AB006970 | Trailer TGGGTC, Position 1328 Mus musculus Gaa1 mRNA for GPI anchor attachment protein |
| AB002136 | Trailer TGGGTC, Position 1321 Mus musculus mRNA for glycosylphosphatidylinositol anchor |
| TCTGTGTGTG count=6 | |
| AF152842 | Trailer TGTGTG, Position 1432 Mus musculus strain BALB/c polymyositis scleroderma overlap |
| AF152841 | Trailer TGTGTG, Position 1383 Mus musculus strain BALB/c polymyositis scleroderma overlap |
| TGAAACCAAG count=6 | |
| X64713 | Trailer TATCTT, Position 1759 M.musculus mRNA for cyclin B1. |
| TGCCACTGTG count=6 | |
| X14805 | Trailer CAGGTG, Position 5167 Mus musculus mRNA for DNA methyltransferase 1. |
| AF036009 | Trailer CAGGTG, Position 5786 Mus musculus Dnmt1 mRNA |
| AF036007 | Trailer CAGGTG, Position 5164 Mus musculus DNA (cytosine-5)-methyltransferase (Dnmt1) mRNA |
| TGCGATGAAC count=6 | |
| AB009392 | Trailer TGGGAG, Position 388 Mus musculus mRNA for protein L |
| TGCTTATCCC count=6 | |
| U12473 | Trailer ATTTAG, Position 3175 Mus musculus Balb/c conserved helix-loop-helix ubiquitous kinase |
| TGGAAGTTGG count=6 | |
| AF173156 | Trailer CAGATG, Position 1539 Mus musculus MPAST1 (Past1) mRNA |
| AF099186 | Trailer CAGATG, Position 1531 Mus musculus EH domain-containing protein EHD1 mRNA |
| TGGCTGCAAG count=6 | |
| L36132 | Trailer AAATGT, Position 1565 Mus musculus protein tyrosine kinase (BSK) mRNA |
| Z48757 | Trailer AAATGT, Position 1395 M.musculus mRNA for intestinal tyrosine kinase. |
| TGGGTTATGC count=6 | |
| D31788 | Trailer ATGACG, Position 661 Mouse mRNA for BST-1 |
| L32812 | Trailer ATGACG, Position 665 Mouse antigen (BP-3) mRNA |
| TGTACCTAAG count=6 | |
| D13543 | Trailer AATAAA, Position 5286 Mus musculus mRNA for DNA polymerase alpha catalytic subunit |
| D17384 | Trailer AATAAA, Position 5308 Mouse mRNA for DNA polymerase alpha catalytic subunit p180. |
| TGTCCTCTCA count=6 | |
| AF139659 | Trailer CGTGGG, Position 1094 Mus musculus origin recognition complex subunit 6 (Orc6) mRNA |
| TGTGGCTGGG count=6 | |
| U22035 | Trailer ACAAGA, Position 516 Mus musculus 20S proteasome subunit Lmp7 (Lmp7q allele) mRNA |
| U22034 | Trailer ACAAGA, Position 516 Mus musculus 20S proteasome subunit Lmp7 (Lmp7r |
| U22033 | Trailer ACAAGA, Position 516 Mus musculus 20S proteasome subunit Lmp7 (Lmp7k |
| U22032 | Trailer ACAAGA, Position 516 Mus musculus 20S proteasome subunit Lmp7 (Lmp7b allele) mRNA |
| U22031 | Trailer ACAAGA, Position 516 Mus musculus 20S proteasome subunit Lmp7 (Lmp7d allele) mRNA |
| X64449 | Trailer ACAAGA, Position 535 M.musculus mRNA for proteasome subunit MC13. |
| TTAATTACTC count=6 | |
| U73039 | Trailer ATAATA, Position 4368 Mus musculus Nbr1 (Nbr1) mRNA |
| TTCACCAATG count=6 | |
| L40156 | Trailer GGCAAT, Position 1061 Mus musculus (clones 12.1 |
| TTGACCAAGC count=6 | |
| X13752 | Trailer TCCCTG, Position 1018 Murine mRNA for delta-aminolevulinate dehydratase (EC 4.2.1.24). |
| TTGGGGGCAC count=6 | |
| AB026808 | Trailer ACAGTG, Position 1185 Mus musculus mRNA for synaptotagmin XI |
| AAAATATGCT count=5 | |
| AF169286 | Trailer GCAGAC, Position 866 Mus musculus protein tyrosine phosphatase-like protein PTPLB |
| AAACCAGCCT count=5 | |
| U20290 | Trailer GTTTTT, Position 791 Mus musculus V-1 protein mRNA |
| AAAGTTCGAT count=5 | |
| M85078 | Trailer AGTCAG, Position 1724 Mus musculus granulocyte-macrophage colony stimulating factor |
| AAATGAAGGC count=5 | |
| U25691 | Trailer TTCAAG, Position 1756 Mus musculus lymphocyte specific helicase mRNA |
| AAATTGAGAG count=5 | |
| U02487 | Trailer TAGACG, Position 4306 Mus musculus LAF putative membrane protein (KRAG) mRNA |
| AAATTGTGTT count=5 | |
| AF083215 | Trailer TCTTAA, Position 2624 Mus musculus SCF complex protein Skp2 mRNA |
| AACCTCATTT count=5 | |
| AF269151 | Trailer ATTTAT, Position 2478 Mus musculus transmembrane protein TM9SF3 (Tm9sf3) mRNA |
| AAGAGGAAGC count=5 | |
| Y10968 | Trailer ACAATA, Position 552 M.musculus E800 mRNA. |
| AATAAATTAA count=5 | |
| AF162224 | Trailer ATATTA, Position 1418 Mus musculus angiopoietin-related protein 3 (Angptl3) mRNA |
| ACAACTGATT count=5 | |
| U43084 | Trailer CCTGCT, Position 1688 Mus musculus glucocorticoid-attenuated response gene 16 (GARG-16) |
| ACACAAGTGT count=5 | |
| U17698 | Trailer GGGTTT, Position 2471 Mus musculus ablphilin-1 (abi-1) mRNA |
| ACATACCTCT count=5 | |
| AF037205 | Trailer TCATAA, Position 1945 Mus musculus RING zinc finger protein (Rzf) mRNA |
| ACATATTCCA count=5 | |
| U10903 | Trailer AAAGTT, Position 717 Mus musculus zinc finger protein (RP-8) mRNA |
| ACCCAGCCTT count=5 | |
| L02210 | Trailer AGCAGT, Position 1990 Mus musculus tyrosine kinase-related protein mRNA |
| M98547 | Trailer AGCAGT, Position 1979 Mouse growth factor receptor (RYK) mRNA |
| L21707 | Trailer AGCAGT, Position 2024 Mus musculus receptor tyrosine kinase (MRK) mRNA |
| ACGACGACGC count=5 | |
| J03236 | Trailer CCACGC, Position 613 Mouse (M.musculus) jun-B mRNA |
| ACGTGACCAC count=5 | |
| AB041925 | Trailer CCTTTC, Position 4264 Mus musculus mRNA for GCK family kinase MINK2 |
| AB035697 | Trailer CCTTTC, Position 4239 Mus musculus mRNA for Misshapen/NIKs-related kinase MINK-1 |
| ACGTTCTGAT count=5 | |
| D86726 | Trailer TGAGCT, Position 2441 Mouse mRNA for mMIS5 |
| AGAAATGCTA count=5 | |
| AF249870 | Trailer GAATAA, Position 806 Mus musculus p53 apoptosis-associated target (Perp) mRNA |
| AGAAGGAGAT count=5 | |
| J02622 | Trailer ACTCTG, Position 2205 Mouse mitochondrial aspartate aminotransferase isoenzyme mRNA |
| AGCTTCATCA count=5 | |
| M14220 | Trailer AGCAAC, Position 1687 Mouse neuroleukin mRNA |
| L09104 | Trailer AGCAAC, Position 2897 Mus musculus glucose phosphate isomerase mRNA |
| AGGAAAAGTC count=5 | |
| Y15163 | Trailer ATACCG, Position 1642 Mus musculus mRNA for mrg1 protein. |
| AGGCAGTTTC count=5 | |
| U44426 | Trailer TGTTCT, Position 1585 Mus musculus D52 (mD52) mRNA |
| AGGGCCAAGG count=5 | |
| U57746 | Trailer CATCCC, Position 787 Mus musculus platelet-activating factor acetylhydrolase isoform Ib |
| AGGGGAGGCC count=5 | |
| AF017630 | Trailer GCAGAC, Position 1109 Mus musculus vascular actin single-stranded DNA-binding factor 2 |
| AGTTCAGACA count=5 | |
| U22015 | Trailer ACTGTG, Position 1894 Mus musculus retinoid X receptor interacting protein (RIP110) mRNA |
| AGTTTTTTAA count=5 | |
| AJ237586 | Trailer GAGATG, Position 2245 Mus musculus mRNA for hypothetical protein expressed in thymocytes |
| ATAGGACCAC count=5 | |
| Z54200 | Trailer TTTTCA, Position 4041 M.musculus of DNA encoding DNA-binding protein. |
| ATCAGAGCCA count=5 | |
| AF171875 | Trailer CAGCTA, Position 1247 Mus musculus g1-related zinc finger protein (G1rp) mRNA |
| ATCGTAAATG count=5 | |
| AF199010 | Trailer ACAATC, Position 1845 Mus musculus PALS2-beta splice variant (Pals2) mRNA |
| AF199009 | Trailer ACAATC, Position 1803 Mus musculus PALS2-alpha splice variant (Pals2) mRNA |
| AF161181 | Trailer ACAATC, Position 1671 Mus musculus P55T protein mRNA |
| ATGACAAGAT count=5 | |
| AF060090 | Trailer GTTTAA, Position 91 Mus musculus proteasome subunit C7-I (Psmb2) mRNA |
| ATGCAGAAGA count=5 | |
| M25825 | Trailer ACGGTG, Position 216 Mouse tctex-1 mRNA |
| ATGCTAGCTA count=5 | |
| AF153197 | Trailer TGTTCT, Position 1581 Mus musculus lipotransin mRNA |
| ATTCAGACAG count=5 | |
| AF098967 | Trailer TACATT, Position 3406 Mus musculus interleukin enhancer binding factor 3 (Ilf3) mRNA |
| ATTGTGAACA count=5 | |
| L40406 | Trailer CCTCGT, Position 3330 Mus musculus heat shock protein (hsp-E7I) mRNA |
| D67017 | Trailer CCTCGT, Position 3191 Mus wagneri mRNA for heat shock protein 105 kDa beta (42 degrees |
| D67016 | Trailer CCTCGT, Position 3236 Mus wagneri mRNA for heat shock protein 105 kDa alpha |
| ATTGTTTGTG count=5 | |
| U91848 | Trailer ATTGAA, Position 936 Mus musculus clathrin light chain 2 mRNA |
| ATTTTTATAT count=5 | |
| L33417 | Trailer TACTTT, Position 2786 Mus musculus very low density lipoprotein receptor (VLDLR) |
| U06670 | Trailer TACTTT, Position 2948 Mus musculus very low density lipoprotein receptor mRNA |
| CAAAGGCAAA count=5 | |
| U11822 | Trailer TAATGG, Position 1147 Mus musculus MO15-associated kinase (MO15) mRNA |
| X74145 | Trailer TAATGG, Position 1166 M.musculus mRNA for protein kinase crk4. |
| CAAATAAAAA count=5 | |
| L17076 | Trailer AAAA , Position 1500 Mus musculus (clones EcDNA1 and EcDNA4) RNA-binding protein mRNA |
| CAAGTCCAGG count=5 | |
| L03814 | Trailer AACCCT, Position 1225 Mouse regulatory protein (npdc-1) mRNA |
| X67209 | Trailer AACCCT, Position 1225 M.musculus npdc-1 mRNA for npdcf-1 protein. |
| CACACAATGG count=5 | |
| AF033186 | Trailer AGACCT, Position 850 Mus musculus WSB-1 mRNA |
| CACACAGGAG count=5 | |
| AJ242914 | Trailer AACGGC, Position 2270 Mouse mRNA for neurotrophin receptor interacting factor (Zfp110 |
| CACGAAGGTG count=5 | |
| D17571 | Trailer GTGCCC, Position 1909 Mouse mRNA for NADPH-cytochrome P450 oxidoreductase |
| CACTGGGCCA count=5 | |
| U01024 | Trailer AGGAGC, Position 3048 Mus musculus glycinamide ribonucleotide sythetase (GARS) |
| CAGCCTGACC count=5 | |
| U10118 | Trailer TGCACA, Position 876 Mus musculus endothelial-monocyte activating polypeptide II mRNA |
| CAGCGGGGCC count=5 | |
| AB030185 | Trailer GGCAGA, Position 292 Mus musculus mRNA |
| CCATTTAAAT count=5 | |
| M15668 | Trailer TCCTTA, Position 1443 Mus musculus X chromosome-linked phosphoglycerate kinase (pgk-1) |
| CCCTTCTACC count=5 | |
| X13460 | Trailer TACTCC, Position 2298 Mouse mRNA for p68 protein of the lipocortin family. |
| CCTAAGGAGG count=5 | |
| AF156958 | Trailer AGGCGC, Position 169 Mus musculus NTF2-related export protein NXT1 (NXT1) mRNA |
| CCTAGAGCCA count=5 | |
| AF171080 | Trailer GCACAT, Position 1342 Mus musculus histone macroH2A1.2 variant mRNA |
| AF123312 | Trailer GCACAT, Position 315 Mus musculus core histone MacroH2A.1 mRNA |
| CCTCTGGTGA count=5 | |
| AF053232 | Trailer CTCCAC, Position 1366 Mus musculus SIK similar protein mRNA |
| CCTGCCTTAC count=5 | |
| D87691 | Trailer AATTGG, Position 1097 Mus musculus mRNA for eRF1 |
| CCTTGCTACA count=5 | |
| M93954 | Trailer TCTCCT, Position 491 M.musculus metalloproteinase inhibitor (TIMP-2) mRNA |
| CGCAAGGTGC count=5 | |
| X70764 | Trailer TGGACG, Position 2190 M.musculus mRNA for serine/threonine protein kinase. |
| CGCACCGGCC count=5 | |
| D14485 | Trailer TCCCCG, Position 82 Mouse mRNA for dbpA murine homologue |
| CGGAAGAAGT count=5 | |
| X99921 | Trailer AAAGCT, Position 342 M.musculus mRNA for S100 calcium-binding protein A13. |
| CGTTTGGCCT count=5 | |
| AB025048 | Trailer CTCAAT, Position 1841 Mus musculus mRNA for Sid6061p |
| CTACAGCAGT count=5 | |
| D86725 | Trailer TCTGAG, Position 2747 Mouse mRNA for mMCM2 |
| AF004105 | Trailer TCTGAG, Position 2717 Mus musculus BM28 homolog mRNA |
| CTACATGTTA count=5 | |
| AF107847 | Trailer ATGGGT, Position 1112 Mus musculus neuroendocrine-specific Golgi protein p55 isoform 1 |
| AF005885 | Trailer AGAATT, Position 1754 Mus musculus cyclin G2 mRNA |
| CTCAAAAAAG count=5 | |
| X01023 | Trailer CCACCG, Position 1788 Mouse normal c-myc gene and translocated homologue from J558 |
| CTCACCGTGG count=5 | |
| U05809 | Trailer AGGACC, Position 1756 Mus musculus LAF1 transketolase mRNA |
| CTCCATGCTG count=5 | |
| M30127 | Trailer CTGTCC, Position 1178 Mouse MHC class I tum- transplantation antigen mRNA P35B |
| CTGGCAGATA count=5 | |
| AF017175 | Trailer CACCAA, Position 3506 Mus musculus liver carnitine palmitoyltransferase I mRNA |
| CTTCTCAGAA count=5 | |
| AF242376 | Trailer GAGTCT, Position 156 Mus musculus KRAB zinc finger protein (Mzf13) mRNA |
| CTTGGTAACT count=5 | |
| AB016490 | Trailer TTGTAG, Position 955 Mus musculus mJTB mRNA |
| GACTGACGTT count=5 | |
| U05823 | Trailer TCTGGG, Position 6484 Mus musculus pericentrin mRNA |
| GATGAAGATG count=5 | |
| AF045462 | Trailer ATAAGG, Position 2378 Mus musculus female sterile homeotic-related protein Frg-1 mRNA |
| GCCTGGCAAT count=5 | |
| AB039837 | Trailer GCAGTA, Position 914 Mus musculus Cope1 mRNA for nonclathrin coat protein epsilon-COP |
| GGAAAAGGCA count=5 | |
| X17373 | Trailer GCGGAA, Position 1172 M.musculus mRNA for centrosomin A. |
| GTTGAGACAC count=5 | |
| AF243512 | Trailer AACGTG, Position 668 Mus musculus Ran-interacting protein MOG1 mRNA |
| GTTTGGAATT count=5 | |
| L11316 | Trailer TTCTTT, Position 3271 Mouse oncogene (ect2) mRNA |
| TAATAAACCA count=5 | |
| AF188712 | Trailer AGTGGC, Position 1951 Mus musculus mitochondrial dicarboxylate carrier mRNA |
| AF125536 | Trailer ATTGGT, Position 1802 Mus musculus histone deacetylase-3 (Hdac3) mRNA |
| AF098295 | Trailer ATTGGT, Position 1795 Mus musculus histone deacetylase 3 (Hdac3) mRNA |
| AF074882 | Trailer ATTGGT, Position 1241 Mus musculus strain C57BL/6J histone deacetylase 3 (Hdac3) mRNA |
| AF074881 | Trailer ATTGGT, Position 1814 Mus musculus strain C3H histone deacetylase 3 (Hdac3) mRNA |
| TATATATGTG count=5 | |
| AF079974 | Trailer AACATT, Position 2716 Mus musculus Rac GTPase-activating protein mRNA |
| AB030252 | Trailer AACATT, Position 2758 Mus musculus MgcRacGAP mRNA for GTPase activating protein |
| TATATGTTAA count=5 | |
| AF261944 | Trailer ACATGG, Position 3448 Mus musculus renal NAD(P)H-oxidase renox mRNA |
| TATTTCTGAG count=5 | |
| AF003346 | Trailer TATGTG, Position 1012 Mus musculus ubiquitin-conjugating enzyme UbcM2 mRNA |
| TCATCAGGAT count=5 | |
| M18654 | Trailer TTCCCA, Position 1457 Mouse testis-specific phosphoglycerate kinase (pgk-2) mRNA |
| AF235017 | Trailer ATCACT, Position 700 Mus musculus 2P1 protein mRNA |
| TCGGACGCTC count=5 | |
| D17341 | Trailer AGTGGG, Position 485 Mus musculus mRNA for male-enhanced antigen (Mea) |
| L10401 | Trailer AGTGGG, Position 530 Mus musculus male-enhanced antigen (Mea) mRNA |
| M27938 | Trailer AGTGGG, Position 530 Mouse male-enhanced antigen mRNA (Mea) |
| TCGTGCAACT count=5 | |
| AJ278128 | Trailer GTTGTC, Position 871 Mus musculus mRNA for hypothetical protein (ORF1) |
| TCTCTACTAT count=5 | |
| X78684 | Trailer GTTTCT, Position 1599 M.musculus mRNA for B-cell receptor associated protein (BAP) 29. |
| TCTGTATTTT count=5 | |
| X76341 | Trailer AATCAG, Position 1586 Mus musculus mRNA for glutathione reductase. |
| TCTTTTCCTG count=5 | |
| AF159853 | Trailer ACCCTC, Position 3475 Mus musculus damage-specific DNA binding protein 1 (DDB1) mRNA |
| AB026432 | Trailer ACCCTC, Position 3515 Mus musculus mRNA for XPE UV-damaged DNA binding factor |
| TGAAGTAATA count=5 | |
| X61940 | Trailer TATTTC, Position 1840 Mouse mRNA for a growth factor-inducible immediate early gene |
| TGATGGAGGC count=5 | |
| AJ003140 | Trailer ACAGCA, Position 1021 Mus musculus mRNA for ORC4-related protein |
| Y16386 | Trailer ACAGCA, Position 892 Mus musculus mRNA for origin recognition complex subunit 4. |
| AF167411 | Trailer AGAGAT, Position 2485 Mus musculus pendrin (Pds) mRNA |
| TGCTTCCCAT count=5 | |
| AF035962 | Trailer TGTGGT, Position 1208 Mus musculus MRJ (Mrj) mRNA |
| AB028854 | Trailer TGTGGT, Position 1210 Mus musculus mRNA for mDj4 |
| TGCTTTTTGA count=5 | |
| D38046 | Trailer AATGAA, Position 5161 Mouse mRNA for typeII DNA topoisomerase beta isoform |
| TGGATTGTGG count=5 | |
| U35249 | Trailer AGCCAA, Position 1104 Mus musculus CDK-activating kinase assembly factor p36/MAT1 |
| TGGGCTGGTG count=5 | |
| M84683 | Trailer AGCCAG, Position 1988 Mouse episialin (Muc1) mRNA |
| TGTAGGCAGA count=5 | |
| AB041607 | Trailer GCTCTG, Position 2595 Mus musculus brain cDNA |
| TGTGAGCCCA count=5 | |
| AJ224115 | Trailer TCCATC, Position 2287 Mus musculus mRNA for SRPK1 protein kinase. |
| AB012290 | Trailer TCCATC, Position 2248 Mus musculus mRNA for SRPK1 |
| TGTGTAATAA count=5 | |
| AB041568 | Trailer TTTAAT, Position 1815 Mus musculus brain cDNA |
| TGTTGGCTAC count=5 | |
| M14537 | Trailer TGAATT, Position 1919 Mouse nicotinic acetylcholine receptor beta subunit mRNA |
| TGTTTGTACT count=5 | |
| AB041652 | Trailer CTGTAT, Position 2242 Mus musculus brain cDNA |
| TTAACCATCA count=5 | |
| D29639 | Trailer CTGTCC, Position 1547 Mouse embryonal carcinoma cell mRNA for 3-hydroxyacyl CoA |
| TTACTGTACA count=5 | |
| AB024005 | Trailer TTGGAG, Position 2186 Mus musculus mRNA for KRAB-containing zinc-finger protein KRAZ2 |
| TTATAAGTAA count=5 | |
| AF068780 | Trailer AGAGAA, Position 529 Mus musculus geminin mRNA |
| TTCAAAATAA count=5 | |
| U14390 | Trailer ATGTAT, Position 2973 Mus musculus aldehyde deydrogenase (Ahd3) mRNA |
| TTCAAGAAGT count=5 | |
| Y08701 | Trailer GAAAGA, Position 2141 M.musculus mRNA for Pinin protein. |
| TTCACTTGCA count=5 | |
| M31418 | Trailer AACAGA, Position 1365 Mouse 202 interferon-activatable protein mRNA |
| AF140672 | Trailer AACAAA, Position 1166 Mus musculus interferon-inducible Ifi202b (Ifi202b) mRNA |
| TTGAGAAGAG count=5 | |
| L76092 | Trailer GGCCGC, Position 195 Mus musculus p19 ARF protein mRNA |
| TTGAGAGAAG count=5 | |
| AF039663 | Trailer GAACTG, Position 3546 Mus musculus AC133 antigen homolog mRNA |
| AF026269 | Trailer GAACTG, Position 3472 Mus musculus prominin mRNA |
| TTGCTATCAC count=5 | |
| D49744 | Trailer TGTAAC, Position 1559 Mouse mRNA for farnesyltransferase alpha subunit |
| TTGTGTCACT count=5 | |
| AF174296 | Trailer TCCAAA, Position 2388 Mus musculus GTPase RalB (RalB) mRNA |
| TTGTTTTGAA count=5 | |
| U51904 | Trailer CTCAGA, Position 43 Mus musculus IFN alpha-treated embryonic fibroblast mRNA. |
| TTTTGGGAGA count=5 | |
| Y09234 | Trailer GGAAGA, Position 2335 M.musculus mRNA for kinase-like protein MSTK2S |
| AJ223071 | Trailer GGAAGA, Position 2479 Mus musculus mRNA for serine/threonine kinase protein |
| TTTTGTCTGT count=5 | |
| AF159259 | Trailer TTTTTA, Position 2883 Mus musculus metastasis associated protein MTA2 (MTA2) mRNA |
| TTTTTACAGT count=5 | |
| X89650 | Trailer ATCCAT, Position 1303 M.musculus mRNA for Rab7 protein. |
| AAAAAAAAAT count=4 | |
| AF099988 | Trailer AATAAT, Position 1891 Mus musculus Ste-20 related kinase SPAK mRNA |
| AAAAAGAACG count=4 | |
| M89802 | Trailer CCAGGC, Position 513 Mouse Wnt-7b mRNA |
| AAAAAGTAAA count=4 | |
| AF234885 | Trailer AAAAAT, Position 2121 Mus musculus fam4a2 splice variant b (Fam4a2) mRNA |
| AAAATCATAG count=4 | |
| AB028857 | Trailer CTTTGT, Position 1465 Mus musculus mRNA for mDj7 |
| AAAGTGGTAT count=4 | |
| L43326 | Trailer AGACAA, Position 4310 Mus musculus kinectin (CG-1) mRNA |
| AACTCTGTCA count=4 | |
| AF236064 | Trailer TTAATC, Position 669 Mus musculus VHSV-induced-like protein mRNA |
| AACTTCAAAG count=4 | |
| X85994 | Trailer TTTTAG, Position 2108 M.musculus mRNA for semaphorin E. |
| AAGAAAGATG count=4 | |
| L76223 | Trailer AACAGG, Position 1243 Mus musculus 26S proteasome ATPase (CIP21) mRNA |
| AAGAGCAAAA count=4 | |
| L31652 | Trailer GGATGA, Position 907 Mus musculus alpha 4 protein mRNA |
| AAGCGGCTCT count=4 | |
| AF005886 | Trailer ATAATG, Position 1286 Mus musculus cyclin I mRNA |
| AATAAACTAA count=4 | |
| M20658 | Trailer ACTTGT, Position 4703 Mouse interleukin-1 receptor mRNA |
| AATATTGCCT count=4 | |
| U90886 | Trailer TAATGA, Position 1203 Mus musculus arginase II mRNA |
| AF032466 | Trailer TAATGA, Position 1183 Mus musculus arginase II mRNA |
| AATGAAATGA count=4 | |
| AJ010045 | Trailer TTTCTT, Position 3221 Mus musculus mRNA for Rho guanine nucleotide-exchange factor |
| AATGAAGAAC count=4 | |
| AF035527 | Trailer CGGACG, Position 1096 Mus musculus EHF (Ehf) mRNA |
| AATGCTGAAG count=4 | |
| AB026810 | Trailer GCCTTG, Position 1324 Mus musculus mRNA for synaptotagmin VIdeltaTM2 |
| AB026809 | Trailer GCCTTG, Position 1390 Mus musculus mRNA for synaptotagmin VIdeltaTM1 |
| AB026803 | Trailer GCCTTG, Position 1407 Mus musculus mRNA for synaptotagmin VI |
| AATGTGTTCT count=4 | |
| U27267 | Trailer CATCTT, Position 1046 Mus musculus LPS-induced C-X-C chemokine LIX precursor |
| ACACCATTCC count=4 | |
| AF077527 | Trailer TGAAGT, Position 928 Mus musculus syntenin mRNA |
| AF003693 | Trailer TGAAGT, Position 964 Mus musculus scaffold protein Pbp1 homolog mRNA |
| ACAGATAACT count=4 | |
| AF216309 | Trailer ATGCTA, Position 375 Mus musculus DCRC-4 mRNA |
| AF216308 | Trailer ATGCTA, Position 317 Mus musculus DCRC-3 mRNA |
| AF216307 | Trailer ATGCTA, Position 372 Mus musculus DCRC-2 mRNA |
| AF216306 | Trailer ATGCTA, Position 397 Mus musculus DCRC-1 mRNA |
| ACAGCAGCTG count=4 | |
| L31783 | Trailer AGCTGT, Position 1696 Mus musculus uridine kinase mRNA |
| ACCAAACACA count=4 | |
| J00409 | Trailer AGTGGG, Position 237 Mouse MHC class I H2 gene (haplotype k) |
| M13200 | Trailer AGTGGG, Position 150 Mouse MHC class I H2-K-alpha-2 gene (haplotype bm9) |
| M18631 | Trailer AGTGGG, Position 18 Mouse MHC class I mutant H-2Kkml mRNA. |
| M34932 | Trailer AGTGGG, Position 423 Mouse MHC class I H-2K-kml mRNA (H-2K-kml haplotype) |
| U55818 | Trailer AGTGGG, Position 159 Mus musculus MHC class I antigen H-2K (H-2K) mRNA |
| U55817 | Trailer AGTGGG, Position 159 Mus musculus MHC class I antigen H-2D (H-2D) mRNA |
| ACCAAGAGAG count=4 | |
| X84037 | Trailer TGACAC, Position 3495 M.musculus mRNA for E-selectin ligand-1. |
| ACCTGGTGCC count=4 | |
| AF033017 | Trailer ATACAC, Position 1489 Mus musculus TWIK-1 K+ channel mRNA |
| ACGAGTTCGA count=4 | |
| X04231 | Trailer GGCCAG, Position 56 Mouse 4.5S small RNA associated with poly-(a)-containing RNAs. |
| ACGGTGAACC count=4 | |
| AF071313 | Trailer CCCAGT, Position 1231 Mus musculus COP9 complex subunit 3 (COPS3) mRNA |
| ACGGTTTTCT count=4 | |
| AF181685 | Trailer CTGTAA, Position 2038 Mus musculus membrane protein TMS-2 mRNA |
| ACTGGGGGCT count=4 | |
| AJ251328 | Trailer CTTGTG, Position 1119 Mus musculus mRNA for putative TRAF and TNF receptor associated |
| AGAAGCTGGA count=4 | |
| D42068 | Trailer GGGTGT, Position 1750 Mouse mRNA for syntaxin binding protein muSec1 |
| U19520 | Trailer GGGTGT, Position 1772 Mus musculus vesicle transport protein (munc-18b) mRNA |
| AF263345 | Trailer GGGTGT, Position 1765 Mus musculus syntaxin binding protein Munc18-2 (Stxbp2) mRNA |
| AGAAGTACCA count=4 | |
| K02782 | Trailer GAAACA, Position 4971 Mouse complement component C3 mRNA |
| AGAGAGAAGA count=4 | |
| AF087688 | Trailer TTTTTG, Position 1610 Mus musculus alien-like protein mRNA |
| AF071312 | Trailer TTTTTG, Position 1613 Mus musculus COP9 complex subunit 2 (COPS2) mRNA |
| AGCACCGTGG count=4 | |
| M29264 | Trailer TGAGCT, Position 205 Mouse signal recognition particle subunit (SRP14) mRNA |
| AGCCTCTGCT count=4 | |
| D86604 | Trailer GCACCT, Position 4963 Mouse mRNA for Bach protein 2 |
| AGCTGGCTTG count=4 | |
| AB041594 | Trailer CGGACA, Position 1997 Mus musculus brain cDNA |
| AGCTTCCCAT count=4 | |
| AF169408 | Trailer ATGAAC, Position 1429 Mus musculus non-secreted phospholipase A2 (Splash) mRNA |
| AF169407 | Trailer ATGAAC, Position 1429 Mus musculus phospholipase A2 (Splash) mRNA |
| AGGAGGCAGT count=4 | |
| Z49228 | Trailer GTGTGG, Position 616 M.musculus repetitive DNA. |
| AF223950 | Trailer GTGTGG, Position 861 Mus musculus TIM22 preprotein translocase (Tim22) mRNA |
| AGGCCGGGGC count=4 | |
| D67067 | Trailer GGCAGG, Position 2099 Mouse mRNA for thymic epithelial cell surface antigen |
| AGGGAAGTTC count=4 | |
| D49382 | Trailer ATTGTG, Position 2768 Mus musculus Nedd5 mRNA for septin |
| AGGTAAGAAG count=4 | |
| AF112186 | Trailer TCTTGA, Position 2343 Mus musculus epithelial sodium channel beta subunit mRNA |
| AGTCACAACC count=4 | |
| AF083339 | Trailer TAGCTT, Position 3279 Mus musculus double-stranded RNA-binding zinc finger protein JAZ |
| AGTGCCTGGC count=4 | |
| U42383 | Trailer GCCAGA, Position 1441 Mus musculus fibroblast growth factor inducible gene 13 (FIN13) |
| AGTTAAAAAA count=4 | |
| AB041593 | Trailer AAAAAA, Position 2432 Mus musculus brain cDNA |
| AGTTTCTGTG count=4 | |
| L10106 | Trailer ACTGTA, Position 5683 Mus musculus protein tyrosine phosphate mRNA |
| ATACCAAGAG count=4 | |
| AF182040 | Trailer GTGAGG, Position 1460 Mus musculus LAG protein (Lag) mRNA |
| ATATGTGAAG count=4 | |
| U55061 | Trailer GTCACT, Position 936 Mus musculus beta-galactoside binding lectin intestine isoform |
| ATATTGTAGT count=4 | |
| Y10044 | Trailer TTCTCA, Position 135 Mus musculus mRNA for putative high mobility group protein HMG2a. |
| AF022465 | Trailer TTCTCA, Position 743 Mus musculus high mobility group protein homolog HMG4 (Hmg4) mRNA |
| ATCAGTTAGA count=4 | |
| L41154 | Trailer AAGGGA, Position 670 Mus musculus SM22 alpha mRNA |
| U36588 | Trailer AAGGGA, Position 670 Mus musculus SM22 alpha mRNA |
| ATCATGTTGC count=4 | |
| U81829 | Trailer CATCCT, Position 2310 Mus musculus calumenin mRNA |
| ATCTTTTCTC count=4 | |
| X96618 | Trailer ATTTCG, Position 941 M.musculus mRNA for novel stromal cell protein. |
| ATGAAAAAGA count=4 | |
| M80263 | Trailer ATATGA, Position 1133 Mouse mRNA sequence. |
| M70642 | Trailer ATATGA, Position 1067 Mouse FISP-12 protein (fisp-12) mRNA |
| ATGAACCACC count=4 | |
| AJ237585 | Trailer ATCAGA, Position 3687 Mus musculus mRNA for hypothetical protein expressed in thymocytes |
| ATGCAGATTG count=4 | |
| M59470 | Trailer TTCCTT, Position 464 Mouse cystatin C mRNA |
| ATGCCGCCCC count=4 | |
| X53753 | Trailer TTAGTG, Position 1568 Mouse mRNA for nonmuscle tropomyosin 5. |
| ATGTCTATGC count=4 | |
| AB021743 | Trailer TATCCG, Position 1357 Mus musculus mRNA for PR65 (type 2A serine/threonine protein |
| ATTAGTGTTA count=4 | |
| AF169243 | Trailer AAGAAA, Position 1659 Mus musculus heparan sulfate 2-O-sulfotransferase mRNA |
| AF060178 | Trailer AAGAAA, Position 1668 Mus musculus heparan sulfate 2-sulfotransferase (Hs2st) mRNA |
| CAAAAGTACC count=4 | |
| AF061017 | Trailer CAGGGA, Position 1212 Mus musculus UDP-glucose dehydrogenase (Ugdh) mRNA |
| CAAAGACTCA count=4 | |
| M80206 | Trailer GGTGTT, Position 1186 Mus domesticus poliovirus receptor homolog (MPH) mRNA |
| CAACACAGCT count=4 | |
| AB028863 | Trailer CCCAGT, Position 690 Mus musculus mRNA for MMRP19 |
| CAAGCAGCCC count=4 | |
| AF016271 | Trailer CAGCTG, Position 2626 Mus musculus Ksp-cadherin (Cdh16) mRNA |
| CACATTTGCT count=4 | |
| AB041546 | Trailer GGTTGG, Position 3834 Mus musculus brain cDNA |
| CACCCACCTC count=4 | |
| U81823 | Trailer TGTTAC, Position 1287 Mus musculus p38delta MAP kinase mRNA |
| CAGCACCGTG count=4 | |
| U18975 | Trailer TGTACC, Position 2010 Mus musculus beta-1 |
| CAGCAGTTAA count=4 | |
| D78255 | Trailer AGCAGT, Position 578 Mouse mRNA for PAP-1 |
| CAGGCGGCCA count=4 | |
| D90362 | Trailer AGAACT, Position 2517 Mouse mRNA for cadherin-associated protein (CAP102/alpha catenin). |
| X59990 | Trailer AGAACT, Position 2526 M.musculus alpha-catenin gene for alpha-catenin. |
| CAGGTGTGCT count=4 | |
| AB030200 | Trailer GAGTGG, Position 433 Mus musculus mRNA |
| CAGGTTCAGT count=4 | |
| X57377 | Trailer ATGTCT, Position 6810 Mouse dilute myosin heavy chain gene for novel heavy chain with |
| CAGTCCTGGA count=4 | |
| X07997 | Trailer GGACAG, Position 1860 Mouse mRNA for cytotoxic T-cell membrane glycoprotein Ly-3 3'flank. |
| CATTTCTTCT count=4 | |
| AB045321 | Trailer GCATGA, Position 4257 Mus musculus brain cDNA |
| CCAATATCAA count=4 | |
| U54638 | Trailer CCATTA, Position 2567 Mus musculus rhotekin mRNA |
| CCACAATTAA count=4 | |
| X13135 | Trailer ACTGCA, Position 3261 Murine mRNA fragment for fatty acid synthase (EC 2.3.1.85). |
| AF127033 | Trailer ACTGCA, Position 8309 Mus musculus fatty acid synthase mRNA |
| CCACATCCCA count=4 | |
| L32973 | Trailer TTTCTT, Position 2902 Mouse thymidylate kinase homologue mRNA |
| CCACCTCCCC count=4 | |
| U70315 | Trailer CCAGTC, Position 272 Mus musculus U1 snRNP-specific protein C mRNA |
| X96767 | Trailer CCAGTC, Position 259 M.musculus mRNA for U1 snRNP-specific protein C. |
| CCACGATGTT count=4 | |
| U13262 | Trailer AGATAT, Position 2181 Mus musculus myelin gene expression factor (MEF-2) mRNA |
| CCAGAAGGAG count=4 | |
| AB041654 | Trailer CTAGAG, Position 2530 Mus musculus brain cDNA |
| CCAGCACTGC count=4 | |
| AB030505 | Trailer AAAAGA, Position 3884 Mus musculus mRNA for UBE-1c1 |
| CCAGCGGCCA count=4 | |
| AB030836 | Trailer GAGAAC, Position 1328 Mus musculus ST6GalNAc V mRNA for GD1 alpha synthase |
| CCAGGAATAT count=4 | |
| X79083 | Trailer TGTAAA, Position 2661 M.musculus mRNA for kinase 1 |
| CCAGGTAATT count=4 | |
| AF031903 | Trailer AGTATA, Position 1147 Mus musculus ADP-ribosylation-like factor homolog ARL6 (Arl6) mRNA |
| CCCATTGCTG count=4 | |
| M32015 | Trailer TGGGCG, Position 1194 Mouse lysosomal membrane glycoprotein-type A (lgp-120) mRNA |
| CCCCCACCCC count=4 | |
| D87901 | Trailer ACC , Position 1091 Mouse mRNA for ARF4 |
| CCCTTAGGTG count=4 | |
| X67319 | Trailer GTTGTA, Position 4550 M.musculus mRNA for transcript overlapping myelin basic protein |
| CCTACCGCCA count=4 | |
| AB030201 | Trailer GCTGCG, Position 500 Mus musculus mRNA |
| CCTGGTTGCA count=4 | |
| AF289484 | Trailer TCTTCG, Position 1029 Mus musculus MYG1 mRNA |
| AF252871 | Trailer TCTTCG, Position 1384 Mus musculus GAMM1 protein mRNA |
| CCTTACTGGG count=4 | |
| X70067 | Trailer TACAGC, Position 1188 M.musculus RNPS1 mRNA for RNA/DNA-binding protein. |
| CCTTCCCCAC count=4 | |
| AF100694 | Trailer CTAGCT, Position 1637 Mus musculus Pontin52 mRNA |
| CGATGAAATT count=4 | |
| U43512 | Trailer ATTTCT, Position 2750 Mus musculus dystroglycan (Dag1) mRNA |
| CGCTCACGCC count=4 | |
| U78539 | Trailer CAGCAG, Position 2635 Mus musculus hereditary multiple exostoses (Ext1) mRNA |
| CGGTCCAAGG count=4 | |
| D90374 | Trailer CTCTTG, Position 960 Mouse mRNA for APEX nuclease |
| CGTAAGAAAG count=4 | |
| U71205 | Trailer AGAAGG, Position 623 Mus musculus rit mRNA |
| CTAGAAGGAC count=4 | |
| AB041553 | Trailer AGCTTT, Position 1320 Mus musculus brain cDNA |
| CTCAATAACC count=4 | |
| X57337 | Trailer TAAGCA, Position 1391 M.musculus CDNAp14 mRNA. |
| AB008548 | Trailer TAAGCA, Position 1350 Mus musculus mRNA for type 1 procollagen C-proteinase enhancer |
| CTCCTGCCCC count=4 | |
| AJ005253 | Trailer GACAAG, Position 825 Mus musculus mRNA for ClpP protease. |
| CTCTGGCAGA count=4 | |
| U65735 | Trailer TGTTTG, Position 774 Mus musculus elav G homolog (MelG) mRNA |
| U17595 | Trailer TGTTTG, Position 420 Mus musculus ribonucleoprotein (elrA) mRNA |
| CTGAAGTAAC count=4 | |
| AF003747 | Trailer TTCAGC, Position 4337 Mus musculus zinc transporter 4 (ZnT4) mRNA |
| CTGGGGCTGG count=4 | |
| U19604 | Trailer AATGCT, Position 3153 Mus musculus DNA ligase I mRNA |
| U04674 | Trailer AATGCT, Position 2906 Mus musculus DNA ligase I mRNA |
| CTGGTGGGCA count=4 | |
| AF144627 | Trailer CGGGGT, Position 5124 Mus musculus SLIT1 (Slit1) mRNA |
| CTGTACAGAA count=4 | |
| U52951 | Trailer AAATGA, Position 2022 Mus musculus putative transcriptional regulator mEnx-1 mRNA |
| CTGTGGCTAA count=4 | |
| AF150101 | Trailer GTAAGA, Position 67 Mus musculus small zinc finger-like protein (Tim9a) mRNA |
| CTGTTCAGAG count=4 | |
| D17546 | Trailer AACCCA, Position 4174 Mouse mRNA for collagen |
| CTTAGGTTTT count=4 | |
| L31958 | Trailer AACCCC, Position 668 Mus musculus (clone: pMAT1) mRNA |
| CTTGTGGCTG count=4 | |
| AF041448 | Trailer CCATTA, Position 2706 Mus musculus advillin mRNA |
| GAAGAGCAGA count=4 | |
| AF039840 | Trailer CCCTTC, Position 2092 Mus musculus mitogen-activated protein kinase-activated protein |
| GACACAGTGG count=4 | |
| AF218069 | Trailer GCATCT, Position 514 Mus musculus galectin-8 (Lgals-8) mRNA |
| GACAGGTGAC count=4 | |
| AF004428 | Trailer ACTATT, Position 1151 Mus musculus tumor protein D53 (mD53) mRNA |
| GCCTTAACTA count=4 | |
| AF140224 | Trailer CTGTAA, Position 4422 Mus musculus transcriptional repressor RP58 (rp58) mRNA |
| GCTGGGCATC count=4 | |
| L11163 | Trailer TGCTCC, Position 1203 Mouse short chain acyl-CoA dehydrogenase mRNA |
| GGCTGTGACA count=4 | |
| AF149820 | Trailer ACGACG, Position 669 Mus musculus p33ING1 protein mRNA |
| GGTGCTGTCA count=4 | |
| X57277 | Trailer AATACC, Position 584 M.musculus rac1 gene. |
| GTCCTCCGCA count=4 | |
| U93702 | Trailer GCTATG, Position 882 Mus musculus lysosomal sialidase (NEU) mRNA |
| Y11412 | Trailer GCTATG, Position 885 M.musculus mRNA for sialidase G9. |
| GTCCTTGTCT count=4 | |
| AB014464 | Trailer TGGGTG, Position 507 Mus musculus mRNA for MGC-24v |
| GTCTTGCCCA count=4 | |
| M69293 | Trailer GGTGTC, Position 646 Mouse Id2 protein (Id-2) mRNA |
| GTGGAGATGC count=4 | |
| AF220501 | Trailer TGGTGC, Position 411 Mus musculus PPARgamma cofactor 2 (Pgc2) mRNA |
| AF106473 | Trailer TGGTGC, Position 407 Mus musculus leucine-rich-domain inter-acting protein 1 (Leap1) |
| GTTAACTATG count=4 | |
| Z38117 | Trailer AGCTAG, Position 2845 M.musculus mRNA for dead-box RNA helicase. |
| GTTTCCCTGC count=4 | |
| AJ000990 | Trailer TGGCGG, Position 1153 Mus musculus mRNA for legumain. |
| AF044266 | Trailer TGGCGG, Position 1152 Mus musculus preprolegumain mRNA |
| TAATAAACTT count=4 | |
| U42190 | Trailer TATTTT, Position 4210 Mus musculus G/T-mismatch binding protein (Gtmbp) mRNA |
| TACAAAGTGA count=4 | |
| AJ223293 | Trailer GTGCCA, Position 4190 Mus musculus mRNA for kinesin-related mitotic motor protein. |
| TACAATCATG count=4 | |
| AF056574 | Trailer CTTGAC, Position 3285 Mus musculus pyrroline-5-carboxylate synthetase short isoform mRNA |
| AF056573 | Trailer CTTGAC, Position 3291 Mus musculus pyrroline-5-carboxylate synthetase long isoform mRNA |
| TAGACAGTAT count=4 | |
| M15525 | Trailer TGAAGC, Position 4726 Mouse laminin B1 mRNA |
| X05212 | Trailer TGAAGC, Position 678 Mouse mRNA for laminin B1 C-terminus. |
| TAGATTTTTC count=4 | |
| U84411 | Trailer AGTTCA, Position 2692 Mus musculus protein tyrosine phosphatase (PRL-1) mRNA |
| TAGCTCAGAG count=4 | |
| U43508 | Trailer ACTGGT, Position 2000 Mus musculus RORgamma orphan nuclear receptor mRNA |
| U39071 | Trailer ACTGGT, Position 2038 Mus musculus orphan receptor TOR mRNA |
| AJ132394 | Trailer ACTGGT, Position 2066 Mus musculus mRNA for ROR gamma T protein. |
| TATTCATGAG count=4 | |
| Z19580 | Trailer GGGATT, Position 1055 M.musculus siah-1B protein mRNA. |
| TCAAAACCAA count=4 | |
| AF053550 | Trailer AACCAC, Position 1039 Mus musculus metaxin 2 (Mtx2) mRNA |
| AB041562 | Trailer AACCAC, Position 1058 Mus musculus brain cDNA |
| TCAACTGACT count=4 | |
| U30840 | Trailer CCTTTT, Position 1610 Mus musculus voltage dependent anion channel 1 mRNA |
| TCACCCCTGG count=4 | |
| AB030187 | Trailer GACATT, Position 756 Mus musculus mRNA |
| TCACTGGACT count=4 | |
| AF035645 | Trailer TGGTGT, Position 131 Mus musculus potentially prenylated protein tyrosine phosphatase |
| TCAGGAGACT count=4 | |
| AJ242954 | Trailer TCACCA, Position 4943 Mus musculus partial mRNA for dysferlin (dysf gene). |
| TCATCCTCTC count=4 | |
| AF194871 | Trailer ACCTCC, Position 2478 Mus musculus interferon-inducible GTPase mRNA |
| TCATTACAGA count=4 | |
| M24560 | Trailer TGGTTG, Position 2635 Mouse tyrosinase (tyr1) mRNA |
| M30379 | Trailer TGGTTG, Position 74 Mouse MHC class I mRNA containing an Alu-type II repeat element. |
| TCATTGTCAG count=4 | |
| AF020055 | Trailer ATTTTG, Position 2413 Mus musculus Wdr1 protein mRNA |
| TCGGAAGTGA count=4 | |
| M18373 | Trailer AGATGG, Position 1908 Mouse amyloid beta protein precursor |
| U84012 | Trailer AGATGG, Position 1908 Mus musculus hippocampal amyloid precursor protein mRNA |
| TCTACTGGCA count=4 | |
| U63648 | Trailer GGCCAT, Position 3415 Mus musculus p160 myb-binding protein (P160) mRNA |
| TCTAGCAAAT count=4 | |
| AF077002 | Trailer CCAGGT, Position 1183 Mus musculus 14-3-3 ETA mRNA |
| TCTTTTGCCA count=4 | |
| L15447 | Trailer AGAAGT, Position 942 Mouse small nuclear RNA (Rnu1a-1) mRNA |
| TGAAACACTG count=4 | |
| L26316 | Trailer AAATTG, Position 1260 Mus musculus dihydrofolate reductase (dhfr) mRNA |
| TGAGGAGGAG count=4 | |
| L49502 | Trailer GAGACA, Position 3040 Mus musculus phosphoprotein (p150TSP) mRNA |
| TGCTTGCCCC count=4 | |
| U89772 | Trailer AAACAA, Position 1339 Mus musculus PETA-3 (CD151) mRNA |
| TGGACCTCAC count=4 | |
| U67303 | Trailer CTCTGA, Position 2038 Mus musculus KRAB-A interacting protein mRNA |
| X99644 | Trailer CTCTGA, Position 1648 M.musculus mRNA for TIF1 beta protein. |
| TGGCTAGAAT count=4 | |
| X14432 | Trailer TGCAAA, Position 3122 Mouse mRNA for thrombomodulin. |
| TGGGACTGAG count=4 | |
| U40826 | Trailer GCCTTC, Position 1536 Mus musculus WW-domain binding protein 2 mRNA |
| TGGGCCTGAA count=4 | |
| U60001 | Trailer GCGCGG, Position 281 Mus musculus protein kinase C inhibitor (mPKCI) mRNA |
| TGTTTGTGTC count=4 | |
| AF058797 | Trailer ACTTTG, Position 932 Mus musculus 14-3-3 protein beta mRNA |
| TTAGAGAAGG count=4 | |
| AF077349 | Trailer AGACAG, Position 530 Mus musculus inhibitor of apoptosis homolog mRNA |
| AB013819 | Trailer AGACAG, Position 623 Mus musculus mRNA for TIAP |
| TTATAATGAT count=4 | |
| X95580 | Trailer TCTTAA, Position 3181 M.musculus mRNA for hypoxia-inducible factor I alpha. |
| AF003695 | Trailer TCTTAA, Position 3390 Mus musculus hypoxia-inducible factor 1 alpha (Hif1a) mRNA |
| TTCAACCCTA count=4 | |
| U27177 | Trailer GGAGGT, Position 4286 Mus musculus p107 (p107) mRNA |
| TTCTCTACAT count=4 | |
| D63902 | Trailer AGGACT, Position 4946 Mouse mRNA for estrogen-responsive finger protein |
| TTGGCTTCCT count=4 | |
| X60203 | Trailer GGCTTT, Position 1367 M.musculus mRNA for FK506-binding protein. |
| TTTGAATGTG count=4 | |
| AF013490 | Trailer TATATT, Position 3360 Mus musculus protein-tyrosine phosphatase mRNA |
| TTTGCATCCT count=4 | |
| X17502 | Trailer CAAAGC, Position 2117 Mouse mRNA overexpressed and amplified in teratocarcinoma cell line |
| TTTTTCCAGA count=4 | |
| U84902 | Trailer GAAGGA, Position 328 Mus musculus L23 mitochondrial-related protein (L23mrp) mRNA |
| AAAAACTGGC count=3 | |
| X16671 | Trailer ATAGGT, Position 443 Mouse RNA for type IIB intracisternal A-particle (IAP) element |
| AAAACAAGAC count=3 | |
| AF060490 | Trailer CCAGCT, Position 2591 Mus musculus TLS-associated protein TASR-2 mRNA |
| AB015894 | Trailer CCAGCT, Position 2563 Mus musculus mRNA for neural specific sr protein NSSR 1 |
| AAAAGAACAT count=3 | |
| AF217319 | Trailer CGAGGA, Position 1961 Mus musculus putative repair and recombination helicase RAD26L |
| AAACCCAGGG count=3 | |
| U90446 | Trailer CTTTGT, Position 3029 Mus musculus RNAse L inhibitor (Mu-RLI) mRNA |
| AJ007377 | Trailer CCTCAC, Position 3734 Mus musculus mRNA for Per3 protein. |
| AB013605 | Trailer CCTCAC, Position 3734 Mus musculus mRNA for Per3 |
| AACAGCAATA count=3 | |
| J04103 | Trailer CATTAG, Position 707 Mouse erythroblastosis virus oncogene homolog 2 (ets-2) mRNA |
| AACCAACCCA count=3 | |
| AF006482 | Trailer TTTAAA, Position 2083 Mus musculus nucleoside triphosphatase (NTPase) mRNA |
| AACCGGTCCA count=3 | |
| U21960 | Trailer TGGACA, Position 796 Mus musculus calcium modulating cyclophilin ligand (CAML) gene |
| AACCTACCAT count=3 | |
| AF150755 | Trailer AAACTG, Position 16991 Mus musculus microtubule-actin crosslinking factor (Macf) mRNA |
| AAGAAGTAGC count=3 | |
| U52945 | Trailer TGAAGT, Position 867 Mus musculus tumor susceptibility protein TSG101 (tsg101) mRNA |
| X82319 | Trailer TGAAGT, Position 114 M.musculus CC2 mRNA. |
| AAGAATGGAC count=3 | |
| U21549 | Trailer CAAGAT, Position 1235 Mus musculus Ac39/physophilin mRNA |
| U13840 | Trailer CAAGAA, Position 1252 Mus musculus vacuolar adenosine triphosphatase subunit D mRNA |
| AAGATGCACG count=3 | |
| D88670 | Trailer TATTGG, Position 1289 Mus musculus mRNA for LN1 |
| AF023463 | Trailer TATTGG, Position 1295 Mus musculus peroxisomal phytanoyl-CoA alpha-hydroxylase (PAHX) |
| AAGATGGACA count=3 | |
| U53219 | Trailer GGAGAC, Position 1400 Mus musculus GTPase IGTP mRNA |
| AAGATTTGGT count=3 | |
| X56461 | Trailer TTCAGA, Position 1086 Murine Hox2.2 mRNA for a homeobox protein. |
| AAGTTTCACA count=3 | |
| AF244543 | Trailer TCCTTC, Position 1965 Mus musculus clone 1-17 unknown mRNA. |
| AATGACAGAG count=3 | |
| AF159368 | Trailer TGAGGT, Position 517 Mus musculus TF-1 cell apoptosis related protein-15 (Tfar15) mRNA |
| AATTGTTATA count=3 | |
| AF082526 | Trailer TTTATG, Position 678 Mus musculus MEK binding partner 1 (Mp1) mRNA |
| ACAAAAGAGG count=3 | |
| AB031387 | Trailer CTGTTG, Position 907 Mus musculus mRNA for Clast3 protein |
| ACAACCCTTG count=3 | |
| AF113795 | Trailer CCTCTA, Position 1421 Mus musculus toll/interleukin-1 receptor 8 (TIR8) mRNA |
| ACACAGGAGA count=3 | |
| AF244542 | Trailer CGAGGT, Position 1178 Mus musculus clone 1-14 unknown gene. |
| ACAGTACAAT count=3 | |
| AF100198 | Trailer AGCTCA, Position 1664 Mus musculus putative NAD(P)H steroid dehydrogenase mRNA |
| ACAGTGCGTG count=3 | |
| AF076156 | Trailer CCTGGC, Position 1181 Mus musculus catechol-O-methyltransferase (Comt) mRNA |
| ACATAAAACT count=3 | |
| X63535 | Trailer TTTGTC, Position 4032 M.musculus ufo mRNA. |
| ACATAATTAA count=3 | |
| U01138 | Trailer CAATGA, Position 703 Mus musculus B6D2F1 clone 2C4D mRNA. |
| ACATCTATGA count=3 | |
| D43690 | Trailer GAAGTT, Position 434 Mouse mRNA for adrenodoxin |
| D43689 | Trailer GAAGTT, Position 439 Mouse mRNA for adrenodoxin |
| L29123 | Trailer GAAGTT, Position 461 Mus musculus adrenodoxin mRNA |
| ACCACGGAGC count=3 | |
| D32007 | Trailer GAGCCA, Position 1706 Mouse mRNA for a homlogue of human CBFA2T1(Mtg8a) |
| X79989 | Trailer GAGCCA, Position 1413 M.musculus ETO mRNA. |
| AF215668 | Trailer CCCATG, Position 625 Mus musculus regulator of G-protein signaling 2 mRNA |
| ACCAGGAAAC count=3 | |
| AF002718 | Trailer TTTTAA, Position 462 Mus musculus ATPase inhibitor (IF1) mRNA |
| ACCCCCTTCC count=3 | |
| AF168991 | Trailer CTCTGT, Position 2655 Mus musculus putative GTP-binding protein (Gtpbp2) mRNA |
| ACCTCTAGAC count=3 | |
| X17069 | Trailer AGCCCC, Position 1870 Mouse mRNA for protein with homology to transition protein 2 (TP2). |
| X70887 | Trailer AGCCCC, Position 1908 M.musculus mRNA for p59 immunophilin. |
| ACCTGTGAAA count=3 | |
| AF100171 | Trailer ATCACC, Position 836 Mus musculus myelodysplasia/myeloid leukemia factor 1 (Mlf1) mRNA |
| AF009515 | Trailer ATCACC, Position 836 Mus musculus hematopoietic lineage switch 7 (HLS7) mRNA |
| ACCTTGAAGG count=3 | |
| AF048993 | Trailer AACAGC, Position 1262 Mus musculus ribonuclease H1 (Rnh1) mRNA |
| ACCTTTGCAT count=3 | |
| AF117887 | Trailer AGAAAA, Position 3085 Mus musculus protein arginine methyltransferase (Carm1) mRNA |
| ACGGTCACTT count=3 | |
| AJ001101 | Trailer TCAACA, Position 399 Mus musculus mRNA for gC1qBP gene. |
| ACTCCCTGCC count=3 | |
| AJ249439 | Trailer TGAGCC, Position 477 Mus musculus mRNA for Lsm4 protein (homologue of human Lsm4 gene). |
| ACTGTGTTGG count=3 | |
| M91458 | Trailer ACACTC, Position 2003 Mus musculus sterol-carrier protein X mRNA |
| ACTTCTCTGG count=3 | |
| AF109314 | Trailer TCTCCA, Position 1238 Mus musculus glutaredoxin mRNA |
| AB013137 | Trailer TCTCCG, Position 1228 Mus musculus mRNA for glutaredoxin |
| ACTTTAATGT count=3 | |
| AF232011 | Trailer TAATAG, Position 1022 Mus musculus peroxisomal trans 2-enoyl CoA reductase mRNA |
| ACTTTGAGGA count=3 | |
| Z14044 | Trailer AGCCAT, Position 2361 M.musculus mRNA for valosin-containing protein. |
| AGAAAATACC count=3 | |
| AJ249341 | Trailer TTAGCT, Position 1769 Mus musculus mRNA for mitochondrial thymidine kinase 2 (TK2 gene). |
| AF105217 | Trailer TTAGCT, Position 903 Mus musculus thymidine kinase 2 (Tk2) mRNA |
| AGAAACTGTC count=3 | |
| AF271213 | Trailer CTCTGA, Position 1071 Mus musculus disrupter of silencing SAS10 (Sas10) mRNA |
| AF155362 | Trailer CTCTGA, Position 1066 Mus musculus brain-specific transcription factor BLF-1 (Blf-1) |
| AGACCTGTGG count=3 | |
| AF083214 | Trailer CTGAGT, Position 676 Mus musculus SCF complex protein Skp1 mRNA |
| AGAGAGAGAA count=3 | |
| L07924 | Trailer GCCCTC, Position 3324 Mus musculus guanine nucleotide dissociation stimulator for a |
| AGAGGTGTAC count=3 | |
| M21065 | Trailer ACTAAC, Position 1815 Mouse interferon regulatory factor 1 mRNA |
| AGATAAACTT count=3 | |
| AF229642 | Trailer GTCATC, Position 1497 Mus musculus DXImx46e protein (DXImx46e) mRNA |
| AGATAAATAA count=3 | |
| AF051357 | Trailer AGTTTA, Position 4362 Mus musculus golgin-245 (olp-1) mRNA |
| AGATTGCTGA count=3 | |
| AF133670 | Trailer AACACT, Position 382 Mus musculus ARL-6 interacting protein-2 (Aip-2) mRNA |
| AGCACAGACA count=3 | |
| AB041615 | Trailer CCATTT, Position 1859 Mus musculus brain cDNA |
| AGCATGGTTG count=3 | |
| AB037891 | Trailer TTCTTC, Position 1807 Mus musculus mRNA for Bc10 |
| AGCCACTTAG count=3 | |
| D88315 | Trailer AATTCA, Position 2113 Mouse mRNA for tetracycline transporter-like protein |
| AGCCCTACAG count=3 | |
| U85020 | Trailer TGTATT, Position 4284 Mus musculus M-CSF-induced cysteine protease mRNA |
| AGCCTACTAA count=3 | |
| U66835 | Trailer TTAAAA, Position 290 Mus musculus unknown protein mRNA |
| AGCCTCAGCA count=3 | |
| U10420 | Trailer AACAGC, Position 978 Mus musculus 3T3L1 methyl purine glycosylase (Mpg) mRNA |
| AGCTGGTCCA count=3 | |
| M93422 | Trailer GGCAGA, Position 5439 Mouse adenylyl cyclase type VI mRNA |
| AGGATATCCC count=3 | |
| X92590 | Trailer TATAAG, Position 3782 M.musculus mRNA for HIRA protein. |
| X99712 | Trailer TATAAG, Position 3621 M.musculus mRNA for HIRA protein. |
| AGGCCTGAAC count=3 | |
| D85137 | Trailer CCGTCC, Position 1914 Mouse mRNA for PP1gamma |
| M27071 | Trailer CCGTCC, Position 1150 Mus musculus protein phosphatase type 1 (dis2m1) mRNA |
| U53456 | Trailer CCGTCC, Position 2006 Mus musculus protein phosphatase 1cgamma (PP1cgamma) mRNA |
| AGGTGTCAGT count=3 | |
| Y19008 | Trailer TTTCTA, Position 2601 Mus musculus mRNA for ATP:D-fructose 6-phosphate |
| AF123533 | Trailer TTTCTA, Position 2609 Mus musculus phosphofructokinase-1 C isozyme mRNA |
| AGTAATTGAA count=3 | |
| AF159549 | Trailer CTGGAA, Position 1545 Mus musculus nuclear FMRP interacting protein 1 (Nufip1) mRNA |
| AGTCACTCAC count=3 | |
| AJ007970 | Trailer AGAGGC, Position 1592 Mus musculus mRNA for mGBP-2 protein. |
| AF109168 | Trailer AGAGGC, Position 1552 Mus musculus guanylate binding protein 2 (Gbp2) mRNA |
| AF077007 | Trailer AGAGGC, Position 1599 Mus musculus interferon-induced guanylate binding protein GBP-2 |
| AGTTACTTTA count=3 | |
| AF022811 | Trailer AAAAAT, Position 623 Mus musculus cornichon mRNA |
| ATAAGAAAAA count=3 | |
| U66887 | Trailer TTACTT, Position 5051 Mus musculus DNA repair protein RAD50 (RAD50) mRNA |
| ATACTGTCAA count=3 | |
| D01034 | Trailer AGAAAT, Position 1608 Mus musculus mRNA for TFIID |
| U63933 | Trailer AGAAAT, Position 1798 Mus musculus domesticus transcription factor IID (Tbp) mRNA |
| ATATCGAAGC count=3 | |
| L00993 | Trailer TCTGTT, Position 1924 Mus musculus autoantigen La (SS-B) mRNA |
| ATATGATTGA count=3 | |
| AF015790 | Trailer GAGACC, Position 1185 Mus musculus phospholipid scramblase 2 mRNA |
| ATCATGCTTC count=3 | |
| U25844 | Trailer CAGATG, Position 763 Mus musculus serine proteinase inhibitor (SPI3) mRNA |
| ATCATGTGGT count=3 | |
| AF290472 | Trailer TAAAAG, Position 2221 Mus musculus NudeL mRNA |
| ATCATTCGTG count=3 | |
| D85818 | Trailer TGCAGA, Position 226 Mouse mRNA for RNA polymerase II subuunit RPB14 |
| ATCATTGAGG count=3 | |
| U54984 | Trailer TGGATG, Position 1818 Mus musculus membrane-type matrix metalloproteinase 1 mRNA |
| X83536 | Trailer TGGATG, Position 1744 Mus musculus mRNA for membrane-type matrix metalloproteinase. |
| ATCCTGTGAA count=3 | |
| AF177147 | Trailer AAATGA, Position 312 Mus musculus sialyltransferase 1 (Siat1) gene |
| ATCTAATGAA count=3 | |
| U39643 | Trailer GTGTTA, Position 1781 Mus musculus FAF1 mRNA |
| ATGACTCCCG count=3 | |
| Y13231 | Trailer GGGAGC, Position 874 Mus musculus mRNA for Bak. |
| ATGGGCCCCA count=3 | |
| U89416 | Trailer ACTACA, Position 1 Mus musculus strain BALB/c elongation factor 2 mRNA |
| ATGTCTGCTT count=3 | |
| D30798 | Trailer AAGTTA, Position 2335 Mus musculus mRNA for unc-18 homologue |
| ATGTGAATAT count=3 | |
| U43900 | Trailer ATTTAA, Position 2059 Mus musculus signal transducing adaptor molecule STAM mRNA |
| ATGTTCTTTC count=3 | |
| AF231110 | Trailer CGCAGG, Position 4537 Mus musculus muscleblind mRNA |
| ATTAAAACTA count=3 | |
| X81323 | Trailer TATGTA, Position 3990 M.musculus mRNA for tripeptidyl peptidase II. |
| ATTAAAATGA count=3 | |
| D50464 | Trailer GGAGAG, Position 1956 Mouse SDR2 mRNA |
| ATTAGCATGC count=3 | |
| AF297220 | Trailer CAGGAA, Position 3904 Mus musculus glia maturation factor-beta (Gmfb) mRNA |
| ATTAGTACTA count=3 | |
| U67187 | Trailer GTGTGT, Position 1139 Mus musculus G protein signaling regulator RGS2 (rgs2) mRNA |
| ATTGACTCCC count=3 | |
| D29797 | Trailer AGATTT, Position 643 Mouse mRNA for syntaxin 3A |
| ATTGTCCTCC count=3 | |
| AF186095 | Trailer AGTCAG, Position 2660 Mus musculus germ cell-less 1 protein (Gcl-1) mRNA |
| ATTGTGACCT count=3 | |
| AF006688 | Trailer ATTAAG, Position 3477 Mus musculus peroxisomal acyl-CoA oxidase (muspaox) mRNA |
| ATTTCTTTGA count=3 | |
| U65313 | Trailer TGTGAA, Position 1612 Mus musculus ras-GTPase-activating protein SH3-domain binding |
| AF145285 | Trailer TGTGAA, Position 1710 Mus musculus RNA-binding protein isoform G3BP-2a (G3BP2) mRNA |
| ATTTTTCTGT count=3 | |
| U63860 | Trailer AGCCAT, Position 573 Mus musculus mitochondrial transcription factor A pseudogene mRNA |
| U63859 | Trailer AGCCAT, Position 1145 Mus musculus mitochondrial transcription factor A pseudogene mRNA |
| U57939 | Trailer AGCCAT, Position 937 Mus musculus mitochondrial transcription factor A gene |
| ATTTTTTACT count=3 | |
| U19617 | Trailer GTGGGT, Position 3548 Mus musculus Ets-family transcription factor Elf-1 mRNA |
| CAAAGCAGTG count=3 | |
| M61909 | Trailer CTCCCA, Position 2083 Mouse transcription factor p65 (NF-kappa-B p65) mRNA |
| CAAGACCAGG count=3 | |
| L22472 | Trailer GTGGCT, Position 453 Mouse Bax alpha mRNA |
| CAAGCCCGGG count=3 | |
| AF221507 | Trailer GCCCGG, Position 2140 Mus musculus Lutheran glycoprotein (Lu) mRNA |
| AB035511 | Trailer GCCCGG, Position 2151 Mus musculus LU mRNA for Lutheran antigen |
| CAATCGACTG count=3 | |
| AJ131821 | Trailer GGTTTC, Position 3999 Mus musculus mRNA for sarco/endoplasmic reticulum Ca2+ ATPase; |
| CACAGCGATA count=3 | |
| U24173 | Trailer TCCAGA, Position 53 Mus musculus p21 (WAF1) mRNA |
| CACCGGCCCT count=3 | |
| AF095905 | Trailer GGCACC, Position 657 Mus musculus CPETR2 (Cpetr2) mRNA |
| AF087821 | Trailer GGCACC, Position 602 Mus musculus claudin-3 mRNA |
| AB000715 | Trailer GGCACC, Position 14 Mus musculus mRVP1 mRNA |
| CACTAGCTTC count=3 | |
| X06762 | Trailer TGCGTC, Position 3241 Mouse Hox2.3 mRNA. |
| CAGAAAAAGT count=3 | |
| M12314 | Trailer GGAATC, Position 190 Mouse (strain 129 G-IX+) endogenous murine leukemia virus mRNA |
| M12313 | Trailer GGAATC, Position 580 Mouse endogenous murine leukemia virus mRNA |
| M12315 | Trailer AAAATC, Position 386 Mouse endogenous murine leukemia virus mRNA |
| CAGAGGCCAC count=3 | |
| M74516 | Trailer AGCAAG, Position 1544 Mouse GA binding protein (GABP-beta1 subunit) mRNA |
| CAGAGGCCCT count=3 | |
| Y08922 | Trailer AGCCAG, Position 4187 M.musculus mRNA for Dres9 protein. |
| X98655 | Trailer AGCCAG, Position 79 M.musculus mRNA for 3'UTR of DRES9 gene. |
| AF006467 | Trailer AGCCAG, Position 3761 Mus musculus membrane-associated phosphatidylinositol transfer |
| CAGATGACCG count=3 | |
| Z67745 | Trailer TGGTGG, Position 604 M.musculus mRNA for phosphatase 2A catalytic subunit |
| AF076192 | Trailer TGGTGG, Position 799 Mus musculus protein phosphatase type 2A catalytic subunit alpha |
| CAGGACAACG count=3 | |
| AF117614 | Trailer CCACGG, Position 1041 Mus musculus SOUL protein (Soul) mRNA |
| CAGGACCTGG count=3 | |
| AF168675 | Trailer TAGCAA, Position 960 Mus musculus TNF intracellular domain-interacting protein mRNA |
| CATGAAGTTT count=3 | |
| AF088911 | Trailer TCAGTC, Position 1226 Mus musculus protein phosphatase X (Ppx) mRNA |
| CATTGGTTTC count=3 | |
| L32836 | Trailer TCAGTC, Position 1657 Mus musculus (clone C7/B9) S-adenosyl homocysteine hydrolase (ahcy) |
| CCAAGAAAAA count=3 | |
| AB028861 | Trailer GACTCG, Position 1330 Mus musculus mRNA for mDj11 |
| CCACAGGTCT count=3 | |
| AF090686 | Trailer TTCATG, Position 1601 Mus musculus transcobalmin II (Tcn2) mRNA |
| CCACCTAGCA count=3 | |
| U09816 | Trailer GCCACC, Position 1853 Mus musculus GM2 activator protein (Gm2a) mRNA |
| CCAGGAGTCA count=3 | |
| L06047 | Trailer AGCTCT, Position 830 Mus musculus glutathione transferase mRNA |
| CCAGTGGATG count=3 | |
| U19892 | Trailer AAGTGT, Position 2146 Mus musculus putative CCAAT binding factor 2 (mCBF) mRNA |
| U19891 | Trailer AAGTGT, Position 2432 Mus musculus putative CCAAT binding factor 1 (mCBF) mRNA |
| CCCAGCACAG count=3 | |
| AF123387 | Trailer GAAGGC, Position 1484 Mus musculus strain C57BL/6J Fus1 protein (Fus1) mRNA |
| CCCAGCCACA count=3 | |
| AF018262 | Trailer GAATGG, Position 1234 Mus musculus protein phosphatase 5 (PP5) mRNA |
| CCCAGCCTTG count=3 | |
| AF140607 | Trailer GATAGT, Position 1945 Mus musculus CNP-inducible osteoblast mRNA sequence. |
| CCCTATGGGG count=3 | |
| AF168682 | Trailer AGGAGG, Position 1647 Mus musculus Fas activated serine/threonine FAST kinase mRNA |
| CCCTCCTCAT count=3 | |
| U93309 | Trailer GGTCGG, Position 2879 Mus musculus Dlgh1 homolog (dlg1) mRNA |
| CCTGCTCCTC count=3 | |
| D32250 | Trailer CTCAAG, Position 991 Mouse mRNA for aldose reductase |
| L39795 | Trailer CTCAAG, Position 982 Mus musculus (clone MAR1) aldose reductase mRNA |
| U29152 | Trailer CTCAAG, Position 1001 Mus musculus aldose reductase mRNA |
| AF220100 | Trailer TGGAGG, Position 1098 Mus musculus PDZK1 mRNA |
| CCTTTTCCAT count=3 | |
| X81444 | Trailer TCTGGA, Position 80 M.musculus SIG-111 mRNA. |
| AF023483 | Trailer TCTGGA, Position 1061 Mus musculus HS-1-associating protein HAX-1L (mHAX-1s) pseudogene |
| AF023482 | Trailer TCTGGA, Position 898 Mus musculus HS1-associating protein (mHAX-1s) mRNA |
| CGAATAATCC count=3 | |
| AF058798 | Trailer AGGAGG, Position 1196 Mus musculus 14-3-3 protein sigma mRNA |
| CGCAGTTACA count=3 | |
| U43298 | Trailer TCAATG, Position 3612 Mus musculus laminin beta3 (Lamb3) chain mRNA |
| CGCTGTACTC count=3 | |
| AF071209 | Trailer TCCTCC, Position 1528 Mus musculus pituitary tumor transforming gene (Pttg) mRNA |
| AF069051 | Trailer TCCTCC, Position 814 Mus musculus pituitary tumor transforming gene protein (PTTG) mRNA |
| CTAGACTCTC count=3 | |
| U35141 | Trailer CTTGTT, Position 1401 Mus musculus retinoblastoma-binding protein (mRbAp48) mRNA |
| CTAGAGTGGA count=3 | |
| Z72486 | Trailer CCCTGC, Position 1172 M.musculus mRNA for DNA polymerase delta small subunit. |
| CTCCTCCCTG count=3 | |
| X78709 | Trailer GGCAGG, Position 3817 M.musculus NRF1 mRNA. |
| AF071084 | Trailer GGCAGG, Position 2328 Mus musculus Nrf1 splice variant D (Nrf1) mRNA |
| CTGGAGAGCT count=3 | |
| AB041656 | Trailer CTCAGA, Position 315 Mus musculus brain cDNA |
| CTGGGCCACA count=3 | |
| U66249 | Trailer ATAGCA, Position 1627 Mus musculus Cut alternatively spliced product (CASP) mRNA |
| CTGGGTCCTG count=3 | |
| X65026 | Trailer CCTAAC, Position 1624 M.musculus mRNA for GTP-binding protein. |
| CTGGTCATTT count=3 | |
| M26687 | Trailer CTGGAC, Position 2207 Mouse ecotropic retrovirus receptor (W1) mRNA |
| CTGGTGAAGC count=3 | |
| U73037 | Trailer TGGAGC, Position 1626 Mus musculus interferon regulatory factor 7 (mirf7) mRNA |
| CTGTAGCTGC count=3 | |
| U51196 | Trailer CAGACA, Position 439 Mus musculus APC-binding protein EB1 homolog mRNA |
| CTGTCCTCAG count=3 | |
| AJ245617 | Trailer AGCACA, Position 1602 Mus musculus mRNA for Trf-proximal protein (Trfp gene). |
| CTGTGAAGAA count=3 | |
| L36663 | Trailer AGTTCT, Position 828 Mus musculus CArG box-binding factor mRNA |
| CTGTGCGGAA count=3 | |
| U62105 | Trailer AGAGAA, Position 658 Mus musculus Frg1 (Frg1) mRNA |
| CTGTTTTGGA count=3 | |
| X58380 | Trailer ATTTAA, Position 1272 M.musculus HMGI-C mRNA for a nuclear phosphoprotein. |
| CTTCTGAATG count=3 | |
| U31966 | Trailer CCTGCT, Position 788 Mus musculus carbonyl reductase (Cbr1) mRNA |
| CTTGCCTCCT count=3 | |
| AF159850 | Trailer CACTAA, Position 1515 Mus musculus phospholipid scramblase 3 mRNA |
| CTTTAGGGTT count=3 | |
| U92565 | Trailer TTTTTT, Position 2962 Mus musculus fractalkine mRNA |
| AF071549 | Trailer TTTTTT, Position 3039 Mus musculus fractalkine/neurotactin mRNA |
| GAAGTGACTT count=3 | |
| U58134 | Trailer TTTCAC, Position 522 Mus musculus poly(A) polymerase VI mRNA |
| U52197 | Trailer TTTCAC, Position 461 Mus musculus poly(A) polymerase III mRNA |
| GAATGGGTGG count=3 | |
| AJ278508 | Trailer TAGAAA, Position 2782 Mus musculus mRNA for MDM2 Binding protein (Mtbp gene). |
| GAGAGGGTCG count=3 | |
| AF172447 | Trailer ATTCGT, Position 493 Mus musculus afadin mRNA |
| GCTTTGATGA count=3 | |
| AB031290 | Trailer CCACAA, Position 1339 Mus musculus mRNA for C7-1 protein |
| GGAACACCAT count=3 | |
| M19438 | Trailer GGACGC, Position 130 Mouse cytosolic thymidine kinase mRNA clone pMtk9 |
| M11945 | Trailer GGACGC, Position 237 Mouse cytosolic thymidine kinase mRNA clone pMtk4 |
| GGCGTGGCAG count=3 | |
| AF218254 | Trailer CTGTGG, Position 2088 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit |
| AF218253 | Trailer CTGTGG, Position 2405 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit |
| AB022322 | Trailer CTGTGG, Position 2333 Mus musculus mRNA for a3 subunit of vacuolar-adenosine |
| GGGGACAAAG count=3 | |
| X73361 | Trailer CGCGGC, Position 22 M.musculus mAES-2 mRNA. |
| GGTCACATAT count=3 | |
| U47008 | Trailer TTGAGA, Position 826 Mus musculus transcriptional repressor (NAB1) NAB1 mRNA |
| GGTCAGAAAG count=3 | |
| AF044334 | Trailer TCGGTT, Position 1408 Mus musculus pleiotropic regulator 1 (PLRG1) mRNA |
| GTAACCCTGT count=3 | |
| AJ006486 | Trailer TGATAA, Position 3217 Mus musculus mRNA for RNA binding protein. |
| GTAGCATTTG count=3 | |
| U64828 | Trailer GAGCAA, Position 5132 Mus musculus steroid receptor coactivator-1 (mSRC-1) mRNA |
| U64606 | Trailer GAGCAA, Position 4467 Mus musculus nuclear receptor co-activator (mNRC-1) mRNA |
| U56920 | Trailer GAGCCC, Position 4777 Mus musculus steroid receptor coactivator 1a (Src1a) mRNA |
| TAAATAAAGC count=3 | |
| AF117066 | Trailer TTTGCC, Position 2286 Mus musculus male-specific lethal-3 homolog 1 (Msl3l1) mRNA |
| TAAGACTGTA count=3 | |
| L76155 | Trailer CATGAA, Position 1127 Mus musculus Bat-4 gene |
| TACAGTTTTA count=3 | |
| U83176 | Trailer TCATCT, Position 1908 Mus musculus ROSA 26 transcription AS ROSA26AS mRNA |
| TACATGTGGG count=3 | |
| M63836 | Trailer GAAAAA, Position 2407 Mouse beta-glucoronidase (Gus-s) mRNA |
| M28541 | Trailer GAAAAA, Position 2407 Mouse beta-glucoronidase (Gus-s) mRNA |
| M28540 | Trailer GAAAAA, Position 2407 Mouse beta-glucoronidase (Gus-s) mRNA |
| M19279 | Trailer GAAAAA, Position 2406 Mouse beta-glucuronidase (Gus-s-a allele) mRNA |
| J03047 | Trailer GAAAAA, Position 2407 Mouse beta-glucuronidase mRNA |
| TACGTGGTCC count=3 | |
| Y07812 | Trailer ATGCTG, Position 411 M.musculus mRNA for MAL protein. |
| TACTAATCCT count=3 | |
| M24786 | Trailer TATATT, Position 251 Mouse anti-idotype immunoglobulin heavy chain variable |
| TACTGCTGTA count=3 | |
| U51037 | Trailer CAGCTA, Position 3779 Mus musculus 11-zinc-finger transcription factor (CTCF) mRNA |
| TAGATAGAAG count=3 | |
| X92842 | Trailer TGTTGG, Position 2385 M.musculus mRNA for SURF-6 protein. |
| TAGCTGCTCA count=3 | |
| AF239765 | Trailer TGAAGA, Position 1157 Mus musculus nuclear protein Ytm1p mRNA |
| AB041608 | Trailer TGAAGA, Position 1680 Mus musculus brain cDNA |
| TAGTTCAGTA count=3 | |
| X71978 | Trailer CTCCAA, Position 1292 M.musculus Fif mRNA. |
| TATGCATCCT count=3 | |
| J05185 | Trailer GTCAAG, Position 2207 Mouse protein disulfide isomerase (ERp59) mRNA |
| TATTTTTTAA count=3 | |
| U14166 | Trailer GAAGAG, Position 2981 Mus musculus Kiz-1 mRNA |
| AF051098 | Trailer TAAAAA, Position 1597 Mus musculus seven transmembrane domain orphan receptor mRNA |
| TCAATTCCTT count=3 | |
| M96823 | Trailer TTGGTG, Position 1799 Mouse nucleobindin mRNA |
| TCACCATGTA count=3 | |
| X62700 | Trailer GCCCTA, Position 1372 M.musculus muPAR1 mRNA. |
| TCAGATGTAT count=3 | |
| U11494 | Trailer ATAATG, Position 4303 Mus musculus protein kinase mRNA |
| TCAGCACCCC count=3 | |
| AF164119 | Trailer TCGGAG, Position 205 Mus musculus CRIB-containing BORG3 protein (Borg3) mRNA |
| AF102773 | Trailer TCGGAG, Position 204 Mus musculus Cdc42 effector protein 5 mRNA |
| TCATGTCTCT count=3 | |
| U48420 | Trailer GGAGGA, Position 627 Mus musculus liver glutathione transferase theta class type 2 mRNA |
| X98056 | Trailer GGAGGA, Position 496 M.musculus mRNA for glutathione S-transferase |
| TCATTTTCCT count=3 | |
| D26089 | Trailer CATGCT, Position 2056 Mouse mRNA for mcdc21 protein |
| D87973 | Trailer TCACTT, Position 2767 Mus musculus Impact mRNA |
| TCCACCCTAT count=3 | |
| AF004934 | Trailer GCGAGT, Position 724 Mus musculus Ste20-like kinase mRNA |
| TCCACTTTCT count=3 | |
| AF069988 | Trailer ACAACA, Position 934 Mus musculus nitrilase 1 (Nit1) mRNA |
| TCCATGAATT count=3 | |
| L25125 | Trailer ACAGAC, Position 1798 Mouse RNA helicase and RNA-dependent ATPase from the DEAD box |
| TCCGAGATGA count=3 | |
| AJ276568 | Trailer CCCCAA, Position 376 Mus musculus partial mRNA for TC10-like Rho GTPase (Tcl gene). |
| TCTAATTCAT count=3 | |
| AJ006590 | Trailer AATGCT, Position 6317 Mus musculus mRNA for GANP protein. |
| TCTCTCCTGA count=3 | |
| AF069502 | Trailer GCACTA, Position 1585 Mus musculus ubiquitin specific protease UBP43 mRNA |
| TCTGCAAAAT count=3 | |
| AJ238247 | Trailer AGACTT, Position 1423 Mus musculus mRNA for putative phosphatase subunit. |
| AB041577 | Trailer AGACTT, Position 1580 Mus musculus brain cDNA |
| TCTGCTCTTC count=3 | |
| AF144101 | Trailer AGAGTG, Position 927 Mus musculus succinyl-CoA synthetase (Sucla1) mRNA |
| TCTGGGCCTC count=3 | |
| AF099018 | Trailer TCGCAG, Position 1804 Mus musculus hepatocyte growth factor activator inhibitor type 1 |
| TCTTTTGTCA count=3 | |
| AB041599 | Trailer CATTAA, Position 990 Mus musculus brain cDNA |
| TGAAGAGGAA count=3 | |
| U70674 | Trailer TCTGTA, Position 2231 Mus musculus m-Numb (m-nb) mRNA |
| TGAAGAGGGG count=3 | |
| U01139 | Trailer TGAGCT, Position 1163 Mus musculus B6D2F1 clone 2C11B mRNA. |
| TGACAAATGA count=3 | |
| AF195833 | Trailer AAATGT, Position 1972 Mus musculus cell adhesion molecule nectin-3 alpha mRNA |
| TGACTCTGTC count=3 | |
| M27582 | Trailer TTCTGG, Position 276 Mouse cytosolic mRNA |
| L11650 | Trailer TTCTGG, Position 1755 Mouse cytochrome P-450 IIE1 mRNA |
| M54877 | Trailer TTCTGG, Position 341 Mouse B2 associated protein |
| X01026 | Trailer TTCTGG, Position 280 Mouse mRNA fragment for repetitive element B2. |
| X62595 | Trailer TTCTGG, Position 1644 M.musculus mRNA for Cyp2e1 (ethanol inducible P450). |
| TGAGACAGTT count=3 | |
| U76426 | Trailer ATAGCT, Position 888 Mus musculus K-ras type B mRNA |
| U76425 | Trailer ATAGCT, Position 888 Mus musculus K-ras type A mRNA |
| TGAGGCCTTG count=3 | |
| Z47088 | Trailer TTTTTT, Position 1051 M.musculus mRNA for RNA polymerase II elongation factor-like |
| TGAGGGTGTA count=3 | |
| U10119 | Trailer TGTCAC, Position 2561 Mus musculus SKD1 protein mRNA |
| TGATGCCCCC count=3 | |
| M89641 | Trailer TTCTGG, Position 3807 Mus musculus interferon alpha/beta receptor (IFNAR) mRNA |
| TGATTGCCTT count=3 | |
| U75840 | Trailer CATGGA, Position 1087 Mus musculus interferon regulatory factor 3 (mirf3) mRNA |
| U75839 | Trailer CATGGA, Position 1204 Mus musculus interferon regulatory factor 3 (mirf3) mRNA |
| TGCAATTATT count=3 | |
| D63784 | Trailer AATTAA, Position 1484 Mouse mRNA for MIDA1 |
| U53208 | Trailer AATTAA, Position 1440 Mus musculus zuotin related factor (ZRF1) mRNA |
| TGCTGACAAG count=3 | |
| AF222786 | Trailer ACTTGA, Position 571 Mus musculus nudix hydrolase (NudT5) mRNA |
| TGGAAGGGCC count=3 | |
| U43085 | Trailer TAAATG, Position 3103 Mus musculus glucocorticoid-attenuated response gene 39 (GARG-39) |
| TGGAGAAGCG count=3 | |
| AF079852 | Trailer ACGTAT, Position 1229 Mus musculus intestinal-enriched Kruppel-like factor IKLF mRNA |
| AB025099 | Trailer ACGTAT, Position 1341 Mus musculus mRNA for BTE-binding protein 2 |
| TGGAGACTGA count=3 | |
| U79774 | Trailer GTCCAG, Position 1786 Mus musculus NNP-1 var (NNP-1) mRNA |
| U79773 | Trailer GTCCAG, Position 1633 Mus musculus NNP-1 (NNP-1) mRNA |
| TGGAGGTGGA count=3 | |
| U32394 | Trailer TGTGGA, Position 508 Mus musculus Max-interacting transcriptional repressor (Mad3) mRNA |
| AB027290 | Trailer CGGACA, Position 357 Mus musculus SID 99 mRNA for small GTP binding protein |
| TGGCACTACA count=3 | |
| AF113951 | Trailer GACAAA, Position 2096 Mus musculus cyclin T mRNA |
| AF109179 | Trailer GACAAA, Position 2096 Mus musculus cyclin T1 mRNA |
| AF095640 | Trailer GACAAA, Position 2096 Mus musculus cyclin T1 mRNA |
| AF087662 | Trailer GACAAA, Position 2096 Mus musculus cyclin T1 mRNA |
| TGGCTGCCAG count=3 | |
| AF045663 | Trailer CCATGC, Position 1874 Mus musculus radio-resistance/chemo-resistance/cell cycle |
| TGGGATACAG count=3 | |
| X95403 | Trailer CAGGGC, Position 381 M.musculus mRNA for GTP-binding protein. |
| TGGGCTTCAG count=3 | |
| D14850 | Trailer GAGCTG, Position 1208 Mouse mRNA for germ cell specific lamin C2 |
| X14170 | Trailer GAGCTG, Position 1682 Murine mRNA for lamin C. |
| TGTACTCCCT count=3 | |
| AF098508 | Trailer GTCAAT, Position 737 Mus musculus dynactin light chain (P24) mRNA |
| TGTGAATAAA count=3 | |
| AF111811 | Trailer GTTTTA, Position 3964 Mus musculus proton-dependent high affinity oligopeptide |
| TGTGACATTT count=3 | |
| X95641 | Trailer TTAATG, Position 2429 M.musculus mRNA for serine palmitoyltransferase subunit A. |
| TGTGCACAGC count=3 | |
| AJ222660 | Trailer CAGGAA, Position 1473 Mus musculus mRNA for NifS-like protein precursor. |
| TGTGCTATCT count=3 | |
| Z19543 | Trailer ATGCTC, Position 1183 M.musculus h2-calponin cDNA. |
| TGTGGGAGTA count=3 | |
| AJ130977 | Trailer CATTGA, Position 1369 Mus musculus mRNA for Ariadne protein |
| TGTTCTATAC count=3 | |
| AB024566 | Trailer ATACTG, Position 3104 Mus musculus mRNA for heparan sulfate 6-sulfotransferase 1 |
| TGTTTGCAAA count=3 | |
| AJ132409 | Trailer TACTAC, Position 4773 Mus musculus mRNA for LIM domains containing protein 1. |
| TGTTTGGCTG count=3 | |
| AB025582 | Trailer TGAGGT, Position 355 Mus musculus mRNA for proliferation related acidic leucine rich |
| TTAGAAAAAC count=3 | |
| AF034746 | Trailer CACAGA, Position 2100 Mus musculus LNXp70 (LNX) mRNA |
| AF034745 | Trailer CACAGA, Position 2396 Mus musculus LNXp80 (LNX) mRNA |
| TTCAAAGAGC count=3 | |
| X95397 | Trailer ATCTCC, Position 312 M.musculus mRNA for M31 protein |
| TTCACAGAGC count=3 | |
| AF288689 | Trailer TCAGCA, Position 567 Mus musculus nucleoside diphosphate kinase C (Nm23-M3) mRNA |
| AF153449 | Trailer TCAGCA, Position 585 Mus musculus nucleoside diphosphate kinase (DR-nm23) mRNA |
| TTCAGGAACT count=3 | |
| M27321 | Trailer TTCTCA, Position 104 Mouse interferon-beta mRNA |
| K00020 | Trailer TTCTCA, Position 515 mouse interferon-beta mrna. |
| TTCAGGGCCC count=3 | |
| AF042811 | Trailer TGGGTA, Position 1731 Mus musculus ecto-ATPase mRNA |
| TTCATATTAA count=3 | |
| M58566 | Trailer TCTTAA, Position 2325 Mouse TIS11 primary response gene |
| TTCGTAGTGG count=3 | |
| D87898 | Trailer ACAGCA, Position 342 Mus musculus mRNA for ARF1 |
| TTCTCAGATG count=3 | |
| X54327 | Trailer CAATTT, Position 3387 M.musculus mRNA for glutamyl-tRNA synthetase. |
| TTCTCCCCAG count=3 | |
| AJ401160 | Trailer GAAATC, Position 1543 Mus musculus mRNA for annexin A9 (Anxa9 gene). |
| TTCTGTTGAC count=3 | |
| AB017020 | Trailer CTAAGA, Position 1096 Mus musculus mRNA for JKTBP |
| TTCTTAAAAC count=3 | |
| D38117 | Trailer AACCAA, Position 3113 Mus musculus mRNA for m-calpain large subunit |
| TTCTTGCTAG count=3 | |
| AF027963 | Trailer TGTAGC, Position 1734 Mus musculus X box binding protein-1 (Xbp1) mRNA |
| TTGGAAGAGA count=3 | |
| U44088 | Trailer AAAAGG, Position 1804 Mus musculus TDAG51 (TDAG51) mRNA |
| TTTACAAGTG count=3 | |
| AF084183 | Trailer AGCAAG, Position 1080 Mus musculus SH2/SH3 adaptor protein (Nck) mRNA |
| AF043259 | Trailer AGCAAG, Position 1245 Mus musculus SH2/SH3 adaptor protein (mNck-alpha) mRNA |
| TTTGAAAAGA count=3 | |
| X77731 | Trailer TGATTG, Position 2685 M.musculus mRNA for Deoxycytidine kinase. |
| TTTGCTCTGT count=3 | |
| AF218249 | Trailer TTGCAG, Position 3864 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit |
| AB022321 | Trailer TTGCAG, Position 3706 Mus musculus mRNA for vacuolar-adenosine trisphosphatase |
| TTTGCTTGTG count=3 | |
| M34141 | Trailer GCAGCT, Position 2713 Mouse prostaglandin endoperoxide (PGG/H) mRNA |
| AAAACAGAGA count=2 | |
| AF205278 | Trailer AGTCAG, Position 1435 Mus musculus post-replication repair protein RAD18SC (Rad18sc) |
| AAAACCCGAA count=2 | |
| AF236887 | Trailer ATAGAG, Position 696 Mus musculus protein kinase ATR (Atr) mRNA |
| AAAATCGCAG count=2 | |
| AF174535 | Trailer TTACTG, Position 1808 Mus musculus flavo-binding protein mRNA |
| AAAGATTGTA count=2 | |
| X63440 | Trailer ATAATA, Position 2705 M.musculus mRNA for P19-protein tyrosine phosphatase. |
| AAATAAAGTT count=2 | |
| X51905 | Trailer AGCAAT, Position 1211 Mouse Ldh-2 mRNA for lactate dehydrogenase-B (EC 1.1.1.27). |
| AAATATGTGC count=2 | |
| AF288525 | Trailer CCTATG, Position 1218 Mus musculus myo-inositol 1-phosphate synthase A1 (IsynA1) mRNA |
| AACAGGGAAG count=2 | |
| M96163 | Trailer CCAGCG, Position 2215 Mus musculus (clone 2) serum inducible kinase (SNK) mRNA |
| AACCACTGAC count=2 | |
| AF162853 | Trailer CTGCCT, Position 4350 Mus musculus Rel domain-containing transcription factor NFAT5 |
| AACCCAATAC count=2 | |
| M84563 | Trailer CTCTTG, Position 1269 Mouse purine nucleoside phosphorylase (Np-1) (homotrimer) mRNA |
| AACCGCATCG count=2 | |
| U76832 | Trailer AGAAGA, Position 711 Mus musculus plasma membrane protein syntaxin-4 mRNA |
| AACCTCGTCG count=2 | |
| AJ132830 | Trailer ACTGGG, Position 1953 Mus musculus mRNA for ORC3-related protein. |
| AACTTGTTTT count=2 | |
| X80232 | Trailer TACAAA, Position 1978 M.musculus mRNA for SIG41. |
| AAGAAATGCA count=2 | |
| AF176910 | Trailer TTGATA, Position 2454 Mus musculus cullin 1 (Cul1) mRNA |
| AF136441 | Trailer TTGATA, Position 2414 Mus musculus cullin 1 (Cul1) mRNA |
| AF083216 | Trailer TTGATA, Position 2289 Mus musculus SCF complex protein cul-1 mRNA |
| AAGAGGCAGC count=2 | |
| AB041548 | Trailer TGTTCG, Position 1438 Mus musculus brain cDNA |
| AAGATAGGAA count=2 | |
| AJ011740 | Trailer CACAAG, Position 1292 Mus musculus mRNA for integrase interactor 1a protein (INI1A). |
| AJ011739 | Trailer CACAAG, Position 1292 Mus musculus mRNA for integrase interactor 1a protein (INI1A). |
| AB041578 | Trailer CACAAG, Position 1274 Mus musculus brain cDNA |
| AB017344 | Trailer CACAAG, Position 1072 Mus musculus Ini1 27deletion mRNA for Integrase interactor |
| AB017343 | Trailer CACAAG, Position 1099 Mus musculus mRNA for Integrase interactor 1 |
| AAGCAATCTG count=2 | |
| Z11997 | Trailer AACGTC, Position 1512 M.musculus mRNA for non-histone chromosomal high-mobility group 1 |
| AAGCCAAAGA count=2 | |
| X63730 | Trailer ATGCAA, Position 257 M.musculus mRNA for SmN protein. |
| X62648 | Trailer ATGCAA, Position 304 M.musculus mRNA for SmN protein. |
| AAGCCATTTG count=2 | |
| M72394 | Trailer AATTCC, Position 2371 Mouse calcium-dependent phospholipid binding protein (PLA2) mRNA |
| AAGCGGGAGG count=2 | |
| D29919 | Trailer AGAAAG, Position 31 Mouse mRNA for mouse transcription factor kA1 (A7) containing |
| D16631 | Trailer AGAAAG, Position 328 Mouse mRNA for transcription factor A1 |
| X17500 | Trailer AGAAAG, Position 381 Mouse mRNA for putative transcription factor of the insulin gene |
| AAGGAGGTAG count=2 | |
| AF030343 | Trailer ATATGG, Position 602 Mus musculus peroxisomal/mitochondrial dienoyl-CoA isomerase ECH1p |
| AAGGCAGTTG count=2 | |
| AF094519 | Trailer AGAAGG, Position 3381 Mus musculus diaphanous-related formin (Dia2) mRNA |
| AAGGTATGTA count=2 | |
| Z11664 | Trailer TGTTAT, Position 5102 M.musculus mRNA for son of sevenless 2. |
| AAGTAGAAGT count=2 | |
| AF195142 | Trailer CAATAA, Position 825 Mus musculus selenoprotein R mRNA |
| AAGTATTCTT count=2 | |
| M60285 | Trailer TTATAA, Position 2309 Mouse cAMP-responsive element modulator (CREM) mRNA |
| AATAGGGAAA count=2 | |
| M18194 | Trailer CACAGG, Position 598 Mouse fibronectin (FN) mRNA. |
| AATGACCATC count=2 | |
| L16953 | Trailer ATTTTC, Position 1684 Mouse tumor cell dnaJ-like protein 1 mRNA |
| AATGAGGAAA count=2 | |
| AB024565 | Trailer TCCAAA, Position 1087 Mus musculus mRNA for heparan sulfate 6-sulfotransferase 2 |
| AATGCAAGGG count=2 | |
| AF132482 | Trailer TGATTG, Position 1036 Mus musculus strain C57BL/6J cyclin-dependent kinase 6 (Cdk6) mRNA |
| AATGCAATGA count=2 | |
| AF071315 | Trailer CGTGGG, Position 880 Mus musculus COP9 complex subunit 6 (COPS6) mRNA |
| AATGCCTGGA count=2 | |
| M38337 | Trailer CGGCTC, Position 1101 Mouse milk fat globule membrane protein E8 mRNA |
| Y11684 | Trailer CGGCTC, Position 879 Mus musculus mRNA for mP47 protein |
| AB025280 | Trailer CGGCTC, Position 945 Mus musculus mRNA for milk fat globule glycoprotein MFG-E8 S |
| AB021130 | Trailer CGGCTC, Position 1056 Mus musculus mRNA for milk fat globule glycoprotein MFG-E8 long |
| AATGGACTTG count=2 | |
| AF160355 | Trailer TTACAA, Position 2172 Mus musculus glucosamine-6-phosphate deaminase (Gnpda) mRNA |
| AF088903 | Trailer TTTACA, Position 2180 Mus musculus glucosamine-6-phosphate isomerase mRNA |
| AATTTTCTCA count=2 | |
| AF214646 | Trailer ACTGCA, Position 3344 Mus musculus Sir2alpha protein (Sir2alpha) mRNA |
| ACAAGCACAA count=2 | |
| X16646 | Trailer ATCTTT, Position 949 Mouse mRNA for Na |
| ACAAGTGCAG count=2 | |
| AF084575 | Trailer CATTCT, Position 1021 Mus musculus adaptor protein complex-3 sigma3A subunit isoform |
| ACAATACAAC count=2 | |
| AF149013 | Trailer TTTATG, Position 6747 Mus musculus transient receptor potential-related protein (ChaK) |
| ACAATCTAGT count=2 | |
| U42385 | Trailer CAATGC, Position 2567 Mus musculus fibroblast growth factor inducible gene 16 (FIN16) |
| ACAGACACAT count=2 | |
| L09048 | Trailer CCTCCA, Position 207 Mus musculus Ig rearranged anti-Sm hybridoma mRNA V-region |
| ACAGACTGTT count=2 | |
| D42124 | Trailer GGCCCC, Position 2707 Mouse mRNA for MafK |
| ACAGTGGAGA count=2 | |
| AJ251516 | Trailer CAGCAC, Position 1402 Mus musculus mRNA for cysteine and histidine-rich protein (Chrp |
| ACAGTGTTAT count=2 | |
| AF218084 | Trailer ATTTAT, Position 2953 Mus musculus choroideremia protein (Chm) mRNA |
| ACATGGCTGG count=2 | |
| L11564 | Trailer ATGTGA, Position 534 Mus musculus syndecan-1 (synd-1) mRNA |
| ACATTGTCTT count=2 | |
| U89345 | Trailer TGTTTC, Position 1129 Mus musculus cerebellar postnatal development protein-1 (Cpd1) |
| AB037685 | Trailer TGTTTC, Position 843 Mus musculus mLANP-L mRNA for LANP-like protein |
| ACCAACCACC count=2 | |
| AF072248 | Trailer CCAGCA, Position 590 Mus musculus methyl-CpG binding domain-containing protein MBD3 |
| ACCCAAGGAG count=2 | |
| L35307 | Trailer TTAAAC, Position 2298 Mouse transcription regulator (c-Krox) mRNA |
| Z36549 | Trailer TTAAAC, Position 2298 M.musculus mRNA for zinc finger protein. |
| ACCGCCGGAG count=2 | |
| AF087822 | Trailer CCGTGT, Position 354 Mus musculus claudin-4 mRNA |
| ACGCAGCTGG count=2 | |
| AF099934 | Trailer TGAACG, Position 429 Mus musculus MHC class III protein RP1 (Rp1) mRNA |
| ACGTGTATGT count=2 | |
| AF143947 | Trailer GTCGTG, Position 265 Mus musculus GAP SH3-binding protein (G3BP) mRNA |
| AB001927 | Trailer GTCGTG, Position 2342 Mus musculus mRNA for ras-GTPase-activating protein SH3-domain |
| ACTACAACTA count=2 | |
| U89652 | Trailer TCATTT, Position 10209 Mus musculus breast cancer susceptibility (BRCA2) mRNA |
| U82270 | Trailer TCATTT, Position 10171 Mus musculus breast cancer susceptibility (Brca2) mRNA |
| U65594 | Trailer TCATTT, Position 10459 Mus musculus BRCA2 (Brca2) mRNA |
| ACTACACTTT count=2 | |
| U65586 | Trailer GTTTAC, Position 1332 Mus musculus telomeric protein mTRF1 mRNA |
| ACTAGCTTCG count=2 | |
| J04134 | Trailer AGGAGG, Position 756 Mouse brain calmodulin-dependent phosphatase (calcineurin) |
| J05479 | Trailer AGGAGG, Position 1473 Mouse calcineurin catalytic subunit mRNA |
| ACTAGGACAG count=2 | |
| AJ002306 | Trailer GAGGAG, Position 671 Mus musculus mRNA for synaptogyrin 1b. |
| ACTCTATTTT count=2 | |
| AF193810 | Trailer GTGTAG, Position 2034 Mus musculus Rh type C glycoprotein (Rhcg) mRNA |
| ACTGGGGTCA count=2 | |
| Z46720 | Trailer ATGGCA, Position 207 M.musculus mRNA for perinuclear binding protein. |
| ACTGGGTGTG count=2 | |
| X64837 | Trailer TTTCAG, Position 2065 M.musculus Oat mRNA for ornithine aminotransferase. |
| ACTTTTTAAA count=2 | |
| AF026073 | Trailer GGAAAA, Position 1624 Mus musculus amine N-sulfotransferase (SULT-N) mRNA |
| AGAAAACCAA count=2 | |
| M33960 | Trailer TTTACT, Position 2657 Mouse plasminogen activator inhibitor (PAI-1) mRNA |
| AGAAAATTCA count=2 | |
| AF190665 | Trailer CATCAG, Position 1338 Mus musculus LMBR1 long form (Lmbr1) mRNA |
| AGAACCCAGC count=2 | |
| D12618 | Trailer CGAGTG, Position 1280 Mouse mRNA for nucleosome assembly protein-1 |
| X61449 | Trailer CGAGTG, Position 996 M.musculus mRNA for clone DN38. |
| AGAAGAGAAT count=2 | |
| AF195056 | Trailer TTCGCT, Position 3555 Mus musculus SorCSb splice variant of the VPS10 domain receptor |
| AGACTGAATA count=2 | |
| U46026 | Trailer TGTTTT, Position 892 Mus musculus CRE-BP1 transcription factor |
| AGAGGCGACC count=2 | |
| AF187731 | Trailer AGGTAC, Position 9687 Mus musculus LAB300 (Lab300) mRNA |
| AGCAGGTGGT count=2 | |
| AF084548 | Trailer TATCAA, Position 472 Mus musculus vasodilator-stimulated phosphoprotein (Vasp) mRNA |
| AGCAGTTCCA count=2 | |
| AJ238270 | Trailer GTGGTT, Position 448 Mus musculus mRNA for leucine rich protein. |
| AGCCAGATTT count=2 | |
| D13545 | Trailer TGGATT, Position 1365 Mus musculus mRNA for primase large subunit |
| D17385 | Trailer TGGATT, Position 1345 Mouse mRNA for DNA primase large subunit p58. |
| AGCCAGGACC count=2 | |
| AF026489 | Trailer CTCAGA, Position 449 Mus musculus beta III spectrin (Spnb3) mRNA |
| AGCCCCTCTC count=2 | |
| J05261 | Trailer GGCCTC, Position 1676 Mouse protective protein (Mo54) mRNA |
| AF036355 | Trailer AGGCTA, Position 6 Mus musculus SH2 domain-containing putative adapter SH2-B mRNA |
| AGCCTTTTTG count=2 | |
| AF061260 | Trailer TTCCAA, Position 1196 Mus musculus immunosuperfamily protein Bl2 mRNA |
| AGCGATTTAT count=2 | |
| AF125043 | Trailer TAGTAG, Position 1093 Mus musculus bisphosphate 3'-nucleotidase mRNA |
| AGCTGCGTCT count=2 | |
| AF035207 | Trailer GTAGAG, Position 1970 Mus musculus Nip2l mRNA |
| AGCTGTGGGG count=2 | |
| U10115 | Trailer TCTGGG, Position 2447 Mus musculus C57 Black/6 dishevelled segment polarity protein |
| AGGAAGCTTA count=2 | |
| AF118855 | Trailer GACCAT, Position 956 Mus musculus trans-prenyltransferase (Tpt) mRNA |
| AGGATGGGAC count=2 | |
| AF096868 | Trailer AGTTCC, Position 3312 Mus musculus transcytosis associated protein p115 mRNA |
| AGGATGGTGC count=2 | |
| AF159091 | Trailer TTCCAA, Position 725 Mus musculus MHC psoriasis candidate protein (Pcg) mRNA |
| AGGCTGAGCT count=2 | |
| U97675 | Trailer GAATGT, Position 1888 Mus musculus embryonic ectoderm development protein (EED) mRNA |
| U78103 | Trailer GAATGT, Position 1883 Mus musculus embryonic ectoderm development protein (eed) mRNA |
| AGGGAGCTTC count=2 | |
| M74294 | Trailer GTGTGT, Position 1654 Mouse IL-1rn antagonist protein mRNA |
| M64404 | Trailer GTGTGT, Position 1703 Mus domesticus interleukin 1 receptor antagonist (IL-1RA) mRNA. |
| AGGGCCGAGT count=2 | |
| AF230356 | Trailer GATGAG, Position 705 Mus musculus U2 small nuclear ribonucleoprotein A' mRNA |
| AGGTGCTGGA count=2 | |
| AF187148 | Trailer GCAGGA, Position 1847 Mus musculus drebrin E2 mRNA |
| AF187147 | Trailer GCAGGA, Position 1985 Mus musculus drebrin A mRNA |
| AGTAATAGTT count=2 | |
| U09399 | Trailer ATGCAG, Position 2065 Mus musculus domesticus glycine receptor beta subunit precursor |
| AGTATTGTGA count=2 | |
| AF057285 | Trailer GTGCAT, Position 698 Mus musculus intersectin-EH binding protein Ibp1 mRNA |
| AGTCAGCCCG count=2 | |
| AF161074 | Trailer GGCCAG, Position 145 Mus musculus TF-1 apoptosis related protein 19 (Tfar19) mRNA |
| AGTTAGACCA count=2 | |
| U57747 | Trailer CTGGCA, Position 832 Mus musculus platelet-activating factor acetylhydrolase isoform Ib |
| AGTTAGGCTC count=2 | |
| U29156 | Trailer TTCCTT, Position 2949 Mus musculus eps15R mRNA |
| AGTTCCGTAT count=2 | |
| L23755 | Trailer CTACTT, Position 1308 Mus musculus RFC1 mRNA |
| L36539 | Trailer CTACTT, Position 1363 Mus musculus folate carrier protein (IFC-1) mRNA |
| U66103 | Trailer CTACTT, Position 1403 Mus musculus reduced folate carrier (RFC1) mRNA |
| U32469 | Trailer CTACTT, Position 1390 Mus musculus reduced folate carrier (RFC1) mRNA |
| AGTTTGAGCC count=2 | |
| D13181 | Trailer TACCTT, Position 1963 Mouse mRNA for lamin A. |
| ATAAACTCCT count=2 | |
| D14570 | Trailer TTTCTT, Position 2490 Mouse mRNA for PEBP2b3 protein |
| D14571 | Trailer TTTCTT, Position 2617 Mouse mRNA for PEBP2b2 protein |
| D14572 | Trailer TTTCTT, Position 2586 Mouse mRNA for PEBP2b1 protein |
| L03279 | Trailer TTTCTT, Position 2466 Mus musculus core-binding factor mRNA sequence. |
| L03305 | Trailer TTTCTT, Position 2277 Mus musculus core-binding factor mRNA sequence. |
| ATAATTAGCT count=2 | |
| D16333 | Trailer AACATT, Position 2376 Mouse mRNA for coproporphyrinogen oxidase |
| ATAGTTATCC count=2 | |
| M17488 | Trailer GCTCAC, Position 334 Mouse Ig active kappa-chain V-region (180.2G6) mRNA (V8-J5) |
| M17487 | Trailer GCTCAC, Position 326 Mouse Ig active kappa-chain V-region (180.5G4) mRNA (V8-J5) |
| M17486 | Trailer GCTCAC, Position 334 Mouse Ig active kappa-chain V-region (180.6D10) mRNA (V8-J5) |
| M17485 | Trailer GCTCAC, Position 315 Mouse Ig active kappa-chain V-region (180.7C9) mRNA (V8-J5) |
| M17483 | Trailer GCTCAC, Position 332 Mouse Ig active kappa-chain V-region (198.4D9) mRNA (V8-J5) |
| M17482 | Trailer GCTCAC, Position 334 Mouse Ig active kappa-chain V-region (198.5C8) mRNA (V8-J5) |
| M17481 | Trailer GCTCAC, Position 332 Mouse Ig active kappa-chain V-region (198.3D3) mRNA (V8-J5) |
| M17480 | Trailer GCTCAC, Position 332 Mouse Ig active kappa-chain V-region (198.5C2) mRNA (V8-J5) |
| L48678 | Trailer GTACAC, Position 289 Mus musculus (cell line C3H/F2-6) chromosome 6 anti-DNA antibody |
| U55650 | Trailer TCCGCT, Position 289 Mus musculus anti-DNA immunoglobulin light chain IgG |
| AF090430 | Trailer TGGTGC, Position 2000 Mus musculus ATP-dependent metalloprotease FtsH1 mRNA |
| ATCAATGACG count=2 | |
| U53514 | Trailer ACCTGG, Position 528 Mus musculus guanylate kinase (gmk) mRNA |
| ATCACAAACT count=2 | |
| L07918 | Trailer CCCTCC, Position 699 Mus musculus GDP-dissociation inhibitor mRNA |
| ATCATCCTGA count=2 | |
| AJ245899 | Trailer CTTTAG, Position 965 Mus musculus mRNA for Non-Canonical UBiquitin Conjugating Enzyme |
| ATCCAAGCTG count=2 | |
| AF020200 | Trailer TTGTAA, Position 2369 Mus musculus transcription factor PBX3b (PBX3b) mRNA |
| ATCCGTGAGG count=2 | |
| D43643 | Trailer CGTACA, Position 990 Mouse YL-1 mRNA for YL-1 protein (nuclear protein with DNA-binding |
| ATCGAGACAA count=2 | |
| AF092738 | Trailer GGTATA, Position 150 Mus musculus ubiquitously expressed transcript (Uxt) mRNA |
| ATCTAATATA count=2 | |
| AF031128 | Trailer ATTTTT, Position 1618 Mus musculus peroxisome membrane protein PEX2 mRNA |
| ATCTCACAGG count=2 | |
| J05265 | Trailer ACAGGG, Position 1822 Mouse interferon gamma receptor mRNA |
| M25764 | Trailer ACAGGG, Position 1747 Mouse interferon-gamma receptor mRNA |
| M28233 | Trailer ACAGGG, Position 1818 Mouse interferon-gamma receptor mRNA |
| M26711 | Trailer ACAGGG, Position 1822 Murine interferon-gamma receptor (IFN-gamma) mRNA |
| M28995 | Trailer ACAGGG, Position 1723 Mouse interferon-gamma receptor mRNA |
| AF128217 | Trailer ACAGGG, Position 1796 Mus musculus strain SJL/J interferon gamma receptor (Ifngr) mRNA |
| AF128216 | Trailer ACAGGG, Position 1796 Mus musculus strain B10.S/J interferon gamma receptor (Ifngr) mRNA |
| ATGAACGAAG count=2 | |
| AF093590 | Trailer CCAAGA, Position 1337 Mus musculus Ras negative regulator Rabex-5/Rin2 mRNA |
| ATGCGGATAC count=2 | |
| X61434 | Trailer AGTTTT, Position 1393 M.musculus mRNA for cAMP-dependent protein kinase C beta subunit. |
| ATGGCGGGTA count=2 | |
| U79962 | Trailer GCAAGT, Position 1168 Mus musculus protamine-1 RNA binding protein (Prbp) mRNA |
| ATGGGAAAGA count=2 | |
| AF149092 | Trailer ACTGGA, Position 1801 Mus musculus SH3 domain-containing adaptor protein METS-1 (Mets1) |
| AF077003 | Trailer ACTGGA, Position 1819 Mus musculus SH3 domain-containing adapter protein mRNA |
| ATGTGGGGCT count=2 | |
| AF033201 | Trailer GTGGCC, Position 987 Mus musculus clipper/cleavage and polyadenylation specificity |
| ATTACAACTT count=2 | |
| AJ130975 | Trailer ATGTAA, Position 1941 Mus musculus mRNA for Ariadne-2 protein. |
| ATTATTTTGG count=2 | |
| X81816 | Trailer CACCAT, Position 870 M.musculus BAP31 mRNA. |
| ATTCTCGTCT count=2 | |
| L20294 | Trailer CATGGA, Position 394 Mus musculus GTP-binding protein (mSara) homologue mRNA |
| ATTGATAAGG count=2 | |
| U09874 | Trailer ACAGCA, Position 1998 Mus musculus SKD3 mRNA |
| ATTGGAGCTG count=2 | |
| D88792 | Trailer GGAAGC, Position 399 Mouse mRNA for double LIM protein-1 |
| AF037208 | Trailer GGAAGC, Position 473 Mus musculus smooth muscle LIM protein (Crp2/SmLim) mRNA |
| ATTTACCTAC count=2 | |
| AB024004 | Trailer TATGCA, Position 1234 Mus musculus mRNA for KRAB-containing zinc-finger protein KRAZ1 |
| CAAAAAGCAG count=2 | |
| U53586 | Trailer TTCAAC, Position 4938 Mus musculus Evi-5 mRNA |
| CAACACTTTC count=2 | |
| X12789 | Trailer AGCCGC, Position 1743 Mouse embryonal carcinoma mRNA for cytokeratin 8 (endo A). |
| CAACGCAGCA count=2 | |
| AB041545 | Trailer CCGTCT, Position 1431 Mus musculus brain cDNA |
| CAAGGAGACA count=2 | |
| U44731 | Trailer ATCTCA, Position 708 Mus musculus putative purine nucleotide binding protein mRNA |
| CAATATTGAC count=2 | |
| M64291 | Trailer TGACCC, Position 3850 Mus musculus prostaglandin synthase mRNA |
| M88242 | Trailer TGACCC, Position 3811 Mouse glucocortoid-regulated inflammatory prostaglandin G/H |
| X98792 | Trailer TGACCC, Position 1752 M.musculus mRNA for prostaglandin synthase cyclooxygenase |
| CAATTTACAA count=2 | |
| Z67963 | Trailer TTGAAT, Position 2002 M.musculus mRNA for FT1. |
| CACACTGTTA count=2 | |
| Z37110 | Trailer AAACAT, Position 3119 M.musculus mRNA for cyclin G. |
| CACATGTAAA count=2 | |
| D00659 | Trailer CTGTTT, Position 2179 Mus musculus mRNA for aromatase P450 |
| CACCACCTTG count=2 | |
| U58337 | Trailer GCCAGC, Position 1665 Mus musculus ligatin (Lgtn) mRNA |
| CACCTGCTTC count=2 | |
| Y11895 | Trailer TGCCCC, Position 2211 M.musculus mRNA for M-Delta-like 3 gene. |
| CACGCAGAGC count=2 | |
| AF030635 | Trailer TCTCAA, Position 880 Mus musculus FK-506 binding protein homolog (SAM11) mRNA |
| CACTAATGTG count=2 | |
| AB046382 | Trailer AAAAAA, Position 3071 Mus musculus mRNA for testis-abundant finger protein |
| CAGAACTGGA count=2 | |
| AF270700 | Trailer CCCTTG, Position 618 Mus musculus aFGF intracellular binding protein (Fibp) mRNA |
| CAGAAGCTGA count=2 | |
| U27830 | Trailer TGGATG, Position 1645 Mus musculus mSTI1 mRNA |
| CAGACAAAGC count=2 | |
| AF154337 | Trailer AAGCCA, Position 1226 Mus musculus putative seven pass transmembrane protein (Tm7sf1) |
| CAGAGAAGAA count=2 | |
| X63100 | Trailer CTGATA, Position 1890 M.musculus mRNA for connexin45. |
| CAGAGATGAA count=2 | |
| U41287 | Trailer GGTCGA, Position 1355 Mus musculus zinc finger protein (ZPR1) mRNA |
| AB041612 | Trailer GGTCGA, Position 1283 Mus musculus brain cDNA |
| CAGAGCAAAC count=2 | |
| AF207748 | Trailer ACTGGA, Position 3132 Mus musculus histone deacetylase 5 (HDAC5) mRNA |
| AF006602 | Trailer ACTGGA, Position 3213 Mus musculus histone deacetylase mHDA1 mRNA |
| CAGAGCTTCT count=2 | |
| L25108 | Trailer ACAGTA, Position 3048 Mouse LIS mRNA. |
| AF041060 | Trailer GCAAGG, Position 309 Mus musculus co-chaperone mt-GrpE#2 mRNA |
| CAGCATTTGT count=2 | |
| L29223 | Trailer ATCTTC, Position 37 Mus musculus kinesin heavy chain mRNA |
| CAGCTGGACA count=2 | |
| AF077302 | Trailer AGCTCA, Position 768 Mus musculus Bcl-2-interacting protein beclin mRNA |
| CAGGACTACA count=2 | |
| AF212921 | Trailer AGCATC, Position 418 Mus musculus MMTV receptor variant 1 (Mtvr2) mRNA |
| AF212920 | Trailer AGCATC, Position 472 Mus musculus MMTV receptor variant 2 (Mtvr2) mRNA |
| AB012727 | Trailer AGCATC, Position 1811 Mus musculus C184L-22 mRNA |
| AB012726 | Trailer AGCATC, Position 475 Mus musculus mRNA for C184M protein |
| CAGGCAGGAG count=2 | |
| AJ277114 | Trailer CTGAAA, Position 1666 Mus musculus ORF1 for hypothetical protein |
| CAGGCCTACT count=2 | |
| X92410 | Trailer TCGCGT, Position 1011 M.musculus mRNA for MHR23A gene. |
| CAGGGCCTGG count=2 | |
| L38423 | Trailer TGGAGG, Position 767 Mus musculus lymphotoxin-beta receptor gene |
| U29173 | Trailer TGGAGG, Position 751 Mus musculus lymphotoxin-beta receptor mRNA |
| CAGGGGGGAC count=2 | |
| Y11905 | Trailer ACCTGC, Position 499 M.musculus BCL7C mRNA. |
| CAGTGTTTCT count=2 | |
| AF287135 | Trailer GGAGCC, Position 242 Mus musculus cyclin H (Ccnh) mRNA |
| CAGTTACTGG count=2 | |
| U89269 | Trailer GATAGA, Position 1308 Mus musculus preprodipeptidyl peptidase I mRNA |
| U74683 | Trailer GATAGA, Position 1307 Mus musculus dipeptidyl peptidase I precursor mRNA |
| CAGTTCTACG count=2 | |
| J04036 | Trailer AGCGGC, Position 3566 Mus musculus (clone p70ZN8) band 3-related protein mRNA |
| CATCAATTTT count=2 | |
| X95399 | Trailer TAGTAT, Position 185 M.musculus mRNA for M31 protein |
| CATCAGGTAT count=2 | |
| AF176814 | Trailer GTTGAA, Position 1682 Mus musculus Abl-philin 2 mRNA |
| CATCCCAAAT count=2 | |
| AB043687 | Trailer AAGGTT, Position 1081 Mus musculus mRNA for SoxLZ/Sox6-binding protein Solt |
| CATCCGTAAG count=2 | |
| U77040 | Trailer CCCCGG, Position 1180 Mus musculus LIM protein FHL2 (FHL2) mRNA |
| AF153340 | Trailer CCCCGG, Position 1057 Mus musculus four and a half LIM-domain protein DRAL mRNA |
| CATGACATCC count=2 | |
| U13705 | Trailer GCTGGA, Position 541 Mus musculus domesticus C57BL/6J plasma glutathione peroxidase |
| CATGACTAGA count=2 | |
| U39818 | Trailer GTCCTG, Position 5544 Mus musculus tuberin (TSC2) mRNA |
| U37775 | Trailer GTCCTG, Position 5398 Mus musculus tuberin (Tsc2) mRNA |
| CATGCAAACT count=2 | |
| Z54179 | Trailer GCCGTA, Position 686 M.musculus mRNA (evolutionary conserved transcript). |
| CCAAACTACT count=2 | |
| AF019385 | Trailer TGATAA, Position 1166 Mus musculus heparan sulfate D-glucosaminyl 3-O-sulfotransferase-1 |
| CCAACCCTGA count=2 | |
| X14971 | Trailer GAACTT, Position 2963 Mouse mRNA for alpha-adaptin (A). |
| CCAAGGGCCT count=2 | |
| AF136719 | Trailer CGAATG, Position 1875 Mus musculus plakophilin-3 (Pkp3) mRNA |
| CCACCGGGGC count=2 | |
| AJ131889 | Trailer ATCTTC, Position 1390 Mus musculus mRNA for DNA polymerase lambda (Poll gene). |
| AF176099 | Trailer ATCTTC, Position 1331 Mus musculus DNA polymerase lambda (Pol lambda) mRNA |
| CCACTGATGC count=2 | |
| U43076 | Trailer CAAGTA, Position 1063 Mus musculus cdc37 homolog mRNA |
| CCATGAAATC count=2 | |
| AF083809 | Trailer CCCAAA, Position 1876 Mus musculus fizzy-related protein (Fyr) mRNA |
| CCGCAGGGTC count=2 | |
| Y11092 | Trailer AGCACC, Position 1680 M.musculus mRNA for map kinase interacting kinase |
| CCGCCAAAAG count=2 | |
| M38381 | Trailer AATTAC, Position 1463 Mouse serine threonine tyrosine kinase (STY) mRNA |
| L29221 | Trailer AATTAC, Position 1372 Mus musculus clk mRNA |
| U21209 | Trailer AATTAC, Position 1203 Mus musculus nuclear dual specificity kinase T-Sty (sty) mRNA |
| X57186 | Trailer AATTAC, Position 1447 Mouse clk mRNA for protein kinase. |
| CCGTGGACTG count=2 | |
| U60530 | Trailer TTTGCT, Position 1514 Mus musculus Madr2 mRNA |
| AF005743 | Trailer TTTGCT, Position 1514 Mus musculus putative tumor suppressor (Madr2) mRNA |
| CCTAATCATC count=2 | |
| AF000998 | Trailer ACTTAG, Position 6860 Mus musculus CLOCK (Clock) mRNA |
| CCTACCCATG count=2 | |
| Y13832 | Trailer GACCCT, Position 1709 Mus musculus mRNA for GT12 protein. |
| CCTCTCCCAG count=2 | |
| AJ243223 | Trailer GAACAA, Position 1038 Mus musculus mRNA for nephrocystin (Nphp1 gene). |
| AF176210 | Trailer GAACAA, Position 1053 Mus musculus nephrocystin (Nphp1) mRNA |
| AF127180 | Trailer GAACAA, Position 1041 Mus musculus nephrocystin (Nphp1) mRNA |
| CCTGAGCTAC count=2 | |
| AF213381 | Trailer CATGTA, Position 416 Mus musculus ATP-binding cassette protein (Abcf3) mRNA |
| CCTGAGTTCT count=2 | |
| K01498 | Trailer ATGATT, Position 267 Mouse MHC |
| CCTGCACAAG count=2 | |
| AF071186 | Trailer GTGTTT, Position 1436 Mus musculus WW domain binding protein 11 mRNA |
| CCTGCCTTTC count=2 | |
| AJ222580 | Trailer ATCAGG, Position 2491 Mus musculus mRNA for B99 protein. |
| CCTGCTCCAG count=2 | |
| D50646 | Trailer GTCCTC, Position 731 Mouse mRNA for SDF2 |
| CCTGCTCCCC count=2 | |
| U01662 | Trailer TCTGGG, Position 1527 Mus musculus clone M2-2 transcription factor USF2 mRNA |
| CCTGGCTTTG count=2 | |
| AB014889 | Trailer CTGACC, Position 1307 Mus musculus mRNA for Nurr2 |
| CCTTCCAGCT count=2 | |
| D87911 | Trailer GAGCCC, Position 2381 Mus musculus mRNA for Ki antigen |
| CCTTGTAGCC count=2 | |
| AF184973 | Trailer AGAGTT, Position 1139 Mus musculus NOTCH4-like protein (Zneu1) mRNA |
| AF104410 | Trailer AGAGTT, Position 3471 Mus musculus chromosome 2 vascular endothelial zinc finger 1 |
| CGACTGTGCC count=2 | |
| AF013118 | Trailer CGGATG, Position 189 Mus musculus kinesin motor protein KIFC3 mRNA |
| AB001457 | Trailer CGGATG, Position 216 Mus musculus mRNA for motor domain of KIFC3 |
| CGAGCAGCCA count=2 | |
| L38847 | Trailer CATTCC, Position 4241 Mus musculus hepatoma transmembrane kinase ligand (HTK ligand) |
| CGATACATCG count=2 | |
| U09563 | Trailer CAGGCA, Position 1627 Mus musculus orphan receptor RTR mRNA |
| CGCATGGAAC count=2 | |
| AF094520 | Trailer AGATTT, Position 2314 Mus musculus NET1 homolog (Net1) mRNA |
| CGCCCACACC count=2 | |
| AF115426 | Trailer CACGTG, Position 916 Mus musculus LR8 (LR8) mRNA |
| AB031386 | Trailer CACGTG, Position 987 Mus musculus mRNA for Clast1 |
| CGCTGCCGCC count=2 | |
| X66177 | Trailer CCCTGC, Position 1567 M.musculus mRNA for Hox 2.7 protein. |
| CGGGTGAAGA count=2 | |
| AF251799 | Trailer CGAGCG, Position 1332 Mus musculus nuclear pore-associated protein NPAP60 mRNA |
| AF229256 | Trailer CGAGCG, Position 1332 Mus musculus NUP50 mRNA |
| CGGTGAGCAT count=2 | |
| Y18505 | Trailer CCAAAA, Position 1158 Mus musculus mRNA for XAP-5 protein. |
| CGTCCTGGAC count=2 | |
| U86090 | Trailer AGCATC, Position 3013 Mus musculus pancreatic beta-cell kinesin heavy chain mRNA |
| CGTGTGAGGT count=2 | |
| D83745 | Trailer GTGCTG, Position 462 Mus musculus mRNA for ANA |
| Z72000 | Trailer GTGCTG, Position 480 M.musculus BTG3 mRNA. |
| CGTTCCTAGG count=2 | |
| M57422 | Trailer GTACCT, Position 1184 Mouse tristetraproline (TTP) mRNA |
| M58565 | Trailer GTACCT, Position 1153 Mouse TIS11 primary response gene |
| M58691 | Trailer GTACCT, Position 2208 Mouse growth factor-inducible protein mRNA |
| X14678 | Trailer GTACCT, Position 1764 Mouse TPA-induced TIS11 mRNA. |
| CTACCAGCTA count=2 | |
| X56906 | Trailer CCACAG, Position 1615 Mouse OP-1 mRNA for osteogenic protein 1. |
| CTATGTTGCT count=2 | |
| U97079 | Trailer GGAGCT, Position 2887 Mus musculus U5-116kD mRNA |
| CTCACCATCT count=2 | |
| U43187 | Trailer TTATGG, Position 1642 Mus musculus MEK kinase 3 |
| CTCCCCGCTC count=2 | |
| AF264064 | Trailer GCTCAC, Position 1010 Mus musculus diphosphoinositol polyphosphate phosphohydrolase |
| CTCCTTCAGG count=2 | |
| AF044669 | Trailer TGCCTG, Position 1703 Mus musculus insulinoma-associated protein (IA-1) mRNA |
| CTCGTGCCTG count=2 | |
| AJ002307 | Trailer TCTCCC, Position 1164 Mus musculus mRNA for synaptogyrin 2. |
| AF151985 | Trailer TCTCCC, Position 1176 Mus musculus cellugyrin mRNA |
| CTCTTTGCCA count=2 | |
| D87990 | Trailer ACCCCA, Position 943 House mouse; Musculus domesticus mRNA for UDP-galactose transporter |
| CTGAACACCA count=2 | |
| AF193608 | Trailer AAGTAA, Position 983 Mus musculus donson protein (Donson) mRNA |
| CTGAAGAAAT count=2 | |
| X90875 | Trailer CATATG, Position 1927 M.musculus mRNA for FXR1 protein. |
| AF124385 | Trailer CATATG, Position 1541 Mus musculus fragile-X-related protein 1 (Fxr1h) mRNA |
| CTGAAGAGAA count=2 | |
| U80780 | Trailer AAAAGA, Position 1368 Mus musculus putative histone deacetylase (HD1) mRNA |
| X98207 | Trailer AAAAGA, Position 1371 M.musculus mRNA for histone deacetylase. |
| CTGAAGTCTG count=2 | |
| U92794 | Trailer CAGACC, Position 1712 Mus musculus alpha glucosidase II beta subunit mRNA |
| CTGACACCTA count=2 | |
| AF283518 | Trailer CACTCA, Position 1602 Mus musculus elongation factor sec mRNA |
| AF268871 | Trailer CACTCA, Position 1611 Mus musculus MJ0495-like protein SelB mRNA |
| CTGACCATCA count=2 | |
| X69025 | Trailer CTATAC, Position 2518 M.musculus of PCTAIRE-1 mRNA encoding protein kinase. |
| CTGACTATTT count=2 | |
| U13371 | Trailer TAAAAT, Position 1177 Mus musculus (C57BL/10 X C3H)F2 clone 1.5 novel mRNA from |
| CTGAGGAAGC count=2 | |
| AF083876 | Trailer GTAAAT, Position 607 Mus musculus XMP (Xmp) mRNA |
| CTGAGGCCTG count=2 | |
| AB025718 | Trailer CAGCTT, Position 352 Mus musculus mRNA for FGF-21 |
| CTGCCTGAGG count=2 | |
| U33557 | Trailer TTAGAC, Position 2073 Mus musculus folylpolyglutamate synthetase precursor (Fpgs) mRNA |
| U32197 | Trailer TTAGAC, Position 2049 Mus musculus folylpolyglutamate synthetase mRNA |
| CTGGACATCA count=2 | |
| AB033123 | Trailer CTGATA, Position 1834 Mus musculus CtBP2 mRNA for C-terminal binding protein 2 |
| CTGGAGGAAA count=2 | |
| AF158597 | Trailer ACCTAC, Position 1834 Mus musculus histidine-rich Ca2+ binding protein mRNA |
| AF132218 | Trailer ACCTAC, Position 1979 Mus musculus histidine-rich calcium-binding protein mRNA |
| CTGGATGAGA count=2 | |
| M22810 | Trailer AATGCT, Position 519 Mouse androgen-regulated protein mRNA |
| CTGGCGCGGG count=2 | |
| AF146224 | Trailer TAGCCA, Position 1160 Mus musculus HMG domain protein HMGX2 (Hmgx2) mRNA |
| CTGGCTATGC count=2 | |
| AF021031 | Trailer CTGCTG, Position 707 Mus musculus Dgcr6 protein (Dgcr6) mRNA |
| CTGGGTTCAA count=2 | |
| Y14004 | Trailer TCCAGC, Position 1461 Mus musculus mRNA for acyl-CoA thioesterase. |
| CTGGTGGTTC count=2 | |
| L00681 | Trailer ACCTCA, Position 2504 Mus musculus Unp mRNA |
| CTGTCACTGC count=2 | |
| J04627 | Trailer AAAGCC, Position 859 Mouse NAD-dependent methylenetetrahydrofolate dehydrogenase- |
| CTGTGACAAA count=2 | |
| AF234179 | Trailer AAAAAA, Position 2219 Mus musculus RNA-binding protein (Tbrbp) mRNA |
| CTGTGTTACC count=2 | |
| U73200 | Trailer CGGCAA, Position 3193 Mus musculus p116Rip mRNA |
| CTTAAGTGGC count=2 | |
| AF237630 | Trailer ACGTTT, Position 3212 Mus musculus ubiquitous tropomodulin U-Tmod mRNA |
| CTTATAAAAT count=2 | |
| M61731 | Trailer ACATAC, Position 2335 Mus musculus translation initiation factor 4E (eIF-4E) mRNA |
| CTTCCCTGGT count=2 | |
| D78141 | Trailer TTGAAA, Position 2132 Mouse mRNA for TRAF5 protein |
| D83528 | Trailer TTGAAA, Position 1997 Mus musculus mRNA for TRAF5 |
| CTTGAAGGAT count=2 | |
| M61215 | Trailer TTGTAA, Position 2840 Mus musculus ferrochelatase mRNA |
| CTTGTTTTAA count=2 | |
| AF042731 | Trailer ATATAT, Position 2394 Mus musculus phosphatidylserine synthase-1 mRNA |
| CTTTCTACTA count=2 | |
| X93038 | Trailer TGATTG, Position 169 M.musculus mRNA for MAT8 protein. |
| CTTTGCTCTG count=2 | |
| AF151637 | Trailer AACTTG, Position 735 Mus musculus CRIPT protein mRNA |
| CTTTTTATAA count=2 | |
| D64135 | Trailer ACTTAC, Position 3555 Mus musculus Sim2 mRNA |
| GAAATCTTCA count=2 | |
| U41805 | Trailer AGAAGA, Position 530 Mus musculus putative T1/ST2 receptor binding protein precursor |
| GACCGCATGG count=2 | |
| X67083 | Trailer TCAGCC, Position 548 M.musculus chop-10 mRNA. |
| GACTACAGGA count=2 | |
| AF177032 | Trailer CAGCAG, Position 2920 Mus musculus guanine nucleotide exchange factor LFC mRNA |
| GACTTGGATT count=2 | |
| U35646 | Trailer ACAGAA, Position 1948 Mus musculus aminopeptidase mRNA |
| GAGTTTATGG count=2 | |
| AB004789 | Trailer TGAATC, Position 697 Mus musculus mRNA for dolichol-phosphate-mannose synthase |
| GATAGTCAAG count=2 | |
| J04806 | Trailer CAAGTT, Position 789 Mus musculus osteopontin mRNA |
| X13986 | Trailer CAAGTT, Position 735 Mouse mRNA for minopontin. |
| X16151 | Trailer CAAGTT, Position 942 Mouse mRNA for early T-lymphocyte activation 1 protein (ETa-1). |
| GCAACACCTG count=2 | |
| AJ222677 | Trailer CAAGCT, Position 1173 Mus musculus mRNA for coagulation factor X. |
| AF087644 | Trailer CAAGCT, Position 1147 Mus musculus coagulation factor X precursor |
| GCCACATCAC count=2 | |
| X78683 | Trailer AGAACC, Position 893 M.musculus mRNA for B-cell receptor associated protein (BAP) 37. |
| GCTAAGTACA count=2 | |
| AF080253 | Trailer TGGAGT, Position 949 Mus musculus serine/threonine protein kinase 51PK(L) mRNA |
| AF080252 | Trailer TGGAGT, Position 908 Mus musculus serine/threonine protein kinase 51PK(S) mRNA |
| GCTCAGAAGT count=2 | |
| U77714 | Trailer AAAGCA, Position 509 Mus musculus survival motor neuron (Smn) mRNA |
| U63294 | Trailer AAAGCA, Position 526 Mus musculus survival motor neuron (Smn) mRNA |
| Y12835 | Trailer AAAGCA, Position 534 Mus musculus mRNA for survival motor neuron. |
| GCTCTCATTG count=2 | |
| AF054823 | Trailer CCCTTT, Position 1108 Mus musculus TFIIH transcription/DNA repair factor p52 subunit |
| GCTGGCCCAG count=2 | |
| AB024984 | Trailer GGAAAC, Position 1319 Mus musculus Sid329 mRNA |
| GGAAGGACGG count=2 | |
| X55316 | Trailer ACGGAA, Position 832 M.musculus mRNA for CAAT-box DNA binding protein subunit B (NF-YB) |
| GGAGGCACCC count=2 | |
| AF171060 | Trailer AAAAGG, Position 1054 Mus musculus RING finger protein AO7 mRNA |
| GGATTCACTA count=2 | |
| AF054670 | Trailer TGTAGG, Position 501 Mus musculus heme oxygenase-2b (HO-2b) mRNA |
| AF054669 | Trailer TGTAGG, Position 567 Mus musculus heme oxygenase 2a (HO-2a) mRNA |
| AF029874 | Trailer TGTAGG, Position 563 Mus musculus heme oxygenase-2 mRNA |
| GGCTTGGAAT count=2 | |
| AJ242911 | Trailer CCTCAC, Position 735 Mus musculus non coding mRNA for N-acetylglucosamine kinase splice |
| AJ242909 | Trailer CCTCAC, Position 795 Mus musculus mRNA for N-Acetylglucosamine kinase. |
| GGGGACTAAG count=2 | |
| AF179996 | Trailer TTCTCA, Position 3774 Mus musculus Sep2 mRNA |
| GGGTTGGAAA count=2 | |
| U01163 | Trailer GCTAAC, Position 2227 Mus musculus 129SV carnitine palmitoyltransferase II mRNA |
| GGTCAGCACC count=2 | |
| D63850 | Trailer TGTGAA, Position 1872 Mus musculus mRNA for hepatoma-derived growth factor |
| GGTCGGCTGG count=2 | |
| U34691 | Trailer TGCAGC, Position 1229 Mus musculus uroporphyrinogen decarboxylase mRNA |
| GGTCGGGTTC count=2 | |
| D89063 | Trailer TGTTTT, Position 1516 Mus musculus mRNA for oligosaccharyltransferase |
| GGTGGTTACG count=2 | |
| U92477 | Trailer CTGGTG, Position 1767 Mus musculus AblSH3 binding protein mRNA |
| AF162781 | Trailer CTGGTG, Position 4398 Mus musculus SH2-containing inositol 5-phosphatase 2 mRNA |
| GTCAGGTAAT count=2 | |
| M36033 | Trailer AAACAC, Position 3035 Mouse leukocyte common antigen-related phosphatase mRNA |
| GTGAATGATA count=2 | |
| AJ272504 | Trailer CTGTCC, Position 1335 Mus musculus mRNA for Sh3bgrl protein. |
| GTGGGCTTCA count=2 | |
| AF240469 | Trailer GCATCC, Position 2033 Mus musculus nicastrin mRNA |
| GTGTTCAAGA count=2 | |
| AF186373 | Trailer ACCCCC, Position 2229 Mus musculus transglutaminase type 1 (TGase1) mRNA |
| GTTGCTGTTC count=2 | |
| M23898 | Trailer TGGGTG, Position 33 Mus musculus PYS-2 mRNA |
| M23897 | Trailer TGGGTG, Position 33 Mus musculus PYS-2 mRNA |
| M69067 | Trailer TGGGTG, Position 936 Mus musculus mRNA |
| M69068 | Trailer TGGGTG, Position 927 Mus musculus mRNA |
| J00407 | Trailer TGGGTG, Position 359 Mouse MHC class I H2 gene (haplotype d) |
| K01446 | Trailer TGGGTG, Position 32 Mouse MHC class I H2-L gene (q haplotype) transmembrane domain. |
| M33151 | Trailer TGGGTG, Position 936 Mouse MHC class I H2-L-d glycoprotein mRNA |
| M34962 | Trailer TGGGTG, Position 927 Mus musculus MHC class I H-2Ds protein mRNA |
| M34961 | Trailer TGGGTG, Position 927 Mouse MHC class I H-2Dr protein mRNA |
| M58595 | Trailer TGGGTG, Position 754 Mouse MHC class I H-2D-k mRNA (H-2-b x H-2-k) |
| AF013486 | Trailer CAGACC, Position 622 Mus musculus type I interferon receptor soluble isoform precursor |
| D78135 | Trailer GAGCAC, Position 661 Mus musculus mRNA for CIRP |
| GTTTCTTATT count=2 | |
| Y17159 | Trailer CGGAAG, Position 1580 Mus musculus mRNA for SH2-containing leukocyte protein 65. |
| AJ222814 | Trailer CGGAAG, Position 1199 Mus Musculus mRNA for B cell specific protein. |
| AF068182 | Trailer CGGAAG, Position 1235 Mus musculus B cell linker protein BLNK mRNA |
| AB015290 | Trailer CGGAAG, Position 1254 Mus musculus mRNA for BASH |
| TAAAACTCCC count=2 | |
| L29479 | Trailer AAAATC, Position 2178 Mus musculus serine/threonine kinase (sak-a) mRNA |
| TAAAAGAAAA count=2 | |
| U96636 | Trailer TGGTGA, Position 2299 Mus musculus E6-AP ubiquitin protein ligase mRNA |
| U82122 | Trailer TGGTGA, Position 2005 Mus musculus E6-AP ubiquitin-protein ligase (Ube3a) mRNA |
| TAAATACAAA count=2 | |
| AF275549 | Trailer GGATAT, Position 2554 Mus musculus ubiquitin-associated protein NAG20 mRNA |
| TAACATAGTA count=2 | |
| AB030184 | Trailer ATATGA, Position 1100 Mus musculus mRNA |
| TAACCAGGCC count=2 | |
| AJ250394 | Trailer TTAGTT, Position 896 Mus musculus mRNA for hypothetical protein (human Hc11orf5 gene |
| TAACCATTTT count=2 | |
| U35833 | Trailer CATACT, Position 2247 Mus musculus anthracycline-associated resistance (Arx) mRNA |
| TAATTTTAAA count=2 | |
| AF060565 | Trailer AATGTA, Position 5927 Mus musculus RW1 protein mRNA |
| TACACATAGG count=2 | |
| U12570 | Trailer ACAGGT, Position 737 Mus musculus ICR outbred strain von Hippel-Lindau tumor suppressor |
| TACAGACTGA count=2 | |
| AB005909 | Trailer AGGCTA, Position 6054 Mus musculus mRNA for vomeroglandin |
| TACAGTTGTA count=2 | |
| U02887 | Trailer ATGAGA, Position 1950 Mus musculus DNA repair protein (XRCC1) mRNA |
| TACCAGCAAA count=2 | |
| AF243500 | Trailer TGAGGG, Position 1543 Mus musculus plasmic transmembrane protein X mRNA |
| AF199362 | Trailer TGAGGG, Position 1554 Mus musculus serine protease TMPRSS2 (Tmprss2) mRNA |
| AF113596 | Trailer TGAGGG, Position 1543 Mus musculus mosaic serine protease epitheliasin mRNA |
| TACGACTTCA count=2 | |
| AF099053 | Trailer TGGATG, Position 1026 Mus musculus phosphatidylserine synthase-2 mRNA |
| TACGCACGCA count=2 | |
| U81491 | Trailer TCAGCA, Position 2576 Mus musculus polyhomeotic (mPh2) mRNA |
| AF060076 | Trailer TCAGCA, Position 1265 Mus musculus polyhomeotic 2 protein (Mph2) mRNA |
| TACTGGAATA count=2 | |
| D50264 | Trailer GAAAGC, Position 743 Mouse mRNA for phosphatidylinositol glycan class F |
| TACTTGTACA count=2 | |
| AB015895 | Trailer TTTTAT, Position 1747 Mus musculus mRNA for neural specific sr protein NSSR 2 |
| TACTTTGGAA count=2 | |
| U10407 | Trailer AAACAA, Position 708 Mus musculus capping protein beta-subunit isoform 2 mRNA |
| TAGAAGATAA count=2 | |
| Z48587 | Trailer AAGGCA, Position 388 M.musculus ral-A mRNA. |
| AF244951 | Trailer AAGGCA, Position 388 Mus musculus GTPase (Rala) mRNA |
| TAGACAAGAC count=2 | |
| U95053 | Trailer ACAGTT, Position 536 Mus musculus glutamate-cysteine ligase regulatory subunit (Glclr) |
| TAGACCCTTT count=2 | |
| AB010297 | Trailer AAAACA, Position 2264 Mus musculus mRNA for actin-related protein 1 alpha-isoform |
| TAGCCTTATG count=2 | |
| X07414 | Trailer CCCGGG, Position 906 Mouse mRNA for excision repair protein ERCC-1. |
| TAGGACTAGC count=2 | |
| D37801 | Trailer TCCCAA, Position 5340 Mouse mRNA for protein tyrosine phosphatase. |
| D83072 | Trailer TCCCAA, Position 2652 Mouse mRNA for PTP-RL10b |
| TAGTCTAATT count=2 | |
| Z14986 | Trailer ACAGGT, Position 2992 M.musculus mRNA encoding adenosylmethionine decarboxylase. |
| TATAAAATAA count=2 | |
| D76445 | Trailer ATTATT, Position 3234 Mus musculus mkf-1 mRNA |
| TATCTGCTGG count=2 | |
| M31775 | Trailer CAGCCA, Position 353 Mouse cytochrome beta-558 mRNA |
| TATGAAACCA count=2 | |
| X05475 | Trailer AGGCTG, Position 641 Mouse mRNA fragment for complement component C9. |
| TATGGATTTT count=2 | |
| AF052660 | Trailer GAGGAG, Position 620 Mus musculus thioredoxin-related protein mRNA |
| TATTCTCCCA count=2 | |
| AF117610 | Trailer CTGGAC, Position 2643 Mus musculus inner centromere protein INCENP (Incenp) mRNA |
| TCAATAAATT count=2 | |
| U50734 | Trailer GCTAAC, Position 1445 Mus musculus maternal transcript Maid (Maid) mRNA |
| TCACGGGCCG count=2 | |
| AB028736 | Trailer ACCGAG, Position 1186 Mus musculus mRNA for casein kinase I epsilon |
| AB028241 | Trailer ACCGAG, Position 1186 Mus musculus mRNA for casein kinase |
| TCACTGGTGA count=2 | |
| AF216495 | Trailer GCCAGG, Position 1963 Mus musculus ATP-binding cassette protein ABCB9 (Abcb9) mRNA |
| TCAGCAACCG count=2 | |
| AB026621 | Trailer TGGTAG, Position 2080 Mus musculus mRNA for RIE2 |
| TCATCACAGG count=2 | |
| U40746 | Trailer AGCATC, Position 43 Mus musculus formin binding protein 21 mRNA |
| AF071184 | Trailer AGCATC, Position 615 Mus musculus formin binding protein 21 mRNA |
| TCATGATTTA count=2 | |
| U20086 | Trailer TGGAAC, Position 2165 Mus domesticus nuclear binding factor NF2d9 mRNA |
| TCATTAAATG count=2 | |
| D28492 | Trailer GTGATT, Position 2670 Mus musculus mRNA for caspase-2 |
| Y13085 | Trailer GTGATT, Position 2749 M.musculus mRNA for caspase-2. |
| TCCAACACCA count=2 | |
| AB030186 | Trailer ACTACT, Position 1446 Mus musculus mRNA |
| TCCATAATTC count=2 | |
| U01915 | Trailer CAACTT, Position 1181 Mus musculus DNA topoisomerase IIalpha mRNA |
| TCCATTGAGG count=2 | |
| D10715 | Trailer AGTTGG, Position 832 Mouse mRNA for novel GTP-binding protein |
| TCCGAGCATA count=2 | |
| AF087826 | Trailer TACTCC, Position 641 Mus musculus claudin-8 mRNA |
| TCCGTCTCAT count=2 | |
| U12961 | Trailer TCTTTC, Position 1462 Mus musculus NAD(P)H:menadione oxidoreductase (Nmo1) mRNA |
| TCCTAAATGG count=2 | |
| M63725 | Trailer CGTGGA, Position 1377 Mouse binding protein for T-cell receptor (TCR-ATF1) mRNA |
| TCCTCACACT count=2 | |
| AF131206 | Trailer AGAGTG, Position 909 Mus musculus 101F6 protein mRNA |
| TCCTCCTTGC count=2 | |
| AF175324 | Trailer TTTCCT, Position 1455 Mus musculus serine protease OMI (Omi) mRNA |
| AF164513 | Trailer TTTCCT, Position 1438 Mus musculus serine protease (HtrA2) mRNA |
| TCTAAATTCT count=2 | |
| AF039574 | Trailer ACCCTA, Position 3834 Mus musculus serine/threonine protein kinase mRNA |
| TCTAATAAAA count=2 | |
| X61172 | Trailer TATAAT, Position 6049 Mouse mRNA for alpha-mannosidase II. |
| TCTATGTTCC count=2 | |
| AJ250690 | Trailer AAATNT, Position 216 Mus musculus partial mRNA for sr104 protein. |
| TCTCTCTCTC count=2 | |
| L14559 | Trailer TCTCTT, Position 1873 Mus musculus interferon induced 203 protein (Ifi203) mRNA sequence |
| TCTGCAAGGA count=2 | |
| AF001463 | Trailer ATGGTG, Position 171 Mus musculus glypican-5 (Gpc5) mRNA |
| TCTGCATACA count=2 | |
| AJ007971 | Trailer TGCATC, Position 2240 Mus musculus mRNA for IIGP protein. |
| TCTGCCCCCA count=2 | |
| AB013470 | Trailer GCCCGG, Position 1124 Mus musculus CLM3-A mRNA for cytohesin 3 |
| TCTGGGCAGG count=2 | |
| AF151711 | Trailer TGTCCC, Position 1357 Mus musculus protein kinase LKB1 mRNA |
| AF145287 | Trailer TGTCCC, Position 1357 Mus musculus Peutz-Jeghers syndrome kinase LKB1 (Lkb1) mRNA |
| AF129870 | Trailer TGTCCC, Position 1753 Mus musculus serine/threonine-protein kinase LKB1 (Lkb1) mRNA |
| AB015801 | Trailer TGTCCC, Position 1375 Mus musculus mRNA for LKB1 |
| TCTGGTGGCT count=2 | |
| U37351 | Trailer GCCCTT, Position 608 Mus musculus Paneth cell enhanced expression PCEE mRNA |
| TCTGTCTTTC count=2 | |
| X84014 | Trailer AGTGAC, Position 7797 M.musculus mRNA for laminin-5 |
| X84013 | Trailer AGTGAC, Position 5285 M.musculus mRNA for laminin-5 |
| TCTGTTTAAA count=2 | |
| X60367 | Trailer AAAAAA, Position 2614 Mouse CRBPI mRNA for cellular retinol binding protein I (mCRBPI). |
| TCTTCTGAGT count=2 | |
| AJ011971 | Trailer ACCCCA, Position 3392 Mus musculus mRNA for wolframin. |
| AF084482 | Trailer ACCCCA, Position 3356 Mus musculus transmembrane protein (Wfs1) mRNA |
| TCTTCTTTTA count=2 | |
| AF149291 | Trailer GTCCAT, Position 1025 Mus musculus transgelin mRNA |
| TCTTTTCAGA count=2 | |
| AF272044 | Trailer AGTGTC, Position 1867 Mus musculus BRI3 mRNA |
| AB030199 | Trailer AGTGTC, Position 1903 Mus musculus mRNA |
| TGAAACAAGG count=2 | |
| Z48043 | Trailer GGCCAT, Position 2585 M.musculus mRNA for proteinase activated receptor 2. |
| TGAAAGTAGA count=2 | |
| U59761 | Trailer CTCTGC, Position 1454 Mus musculus Na+ |
| TGAAGGCTGT count=2 | |
| L11318 | Trailer CAAGTA, Position 442 Mouse CDC42Mm mRNA |
| TGACACTACC count=2 | |
| M38700 | Trailer CAAGGT, Position 1469 Mus musculus murine p70 Ku lupus autoantigen mRNA |
| AB010282 | Trailer CAAGGT, Position 1568 Mus musculus mRNA for Ku70 |
| TGACACTCTC count=2 | |
| AB011452 | Trailer CGGAGA, Position 1937 Mus musculus mRNA for N-acetylglucosamine-6-O-sulfotransferase |
| AB011451 | Trailer CGGAGA, Position 1937 Mus musculus mRNA for N-acetylglucosamine-6-O-sulfotransferase |
| TGACCGCTTT count=2 | |
| AJ246002 | Trailer GGCCAA, Position 1308 Mus musculus mRNA for spastin protein orthologue (Spast gene). |
| TGACTTTAAT count=2 | |
| AF095718 | Trailer AAAAAC, Position 2720 Mus musculus RRM-type RNA-binding protein brPTB mRNA |
| TGAGCAAGGG count=2 | |
| U70209 | Trailer CAGGAC, Position 13927 Mus musculus polycystic kidney disease 1 protein (Pkd1) mRNA |
| TGAGCACAGC count=2 | |
| AF247674 | Trailer CAGCTA, Position 1754 Mus musculus ERIC1 (Eric1) mRNA |
| AF203446 | Trailer CAGCTA, Position 1358 Mus musculus transforming acidic coiled-coil containing protein 3b |
| AF203445 | Trailer CAGCTA, Position 1970 Mus musculus transforming acidic coiled-coil containing protein 3a |
| AF156934 | Trailer CAGCTA, Position 2023 Mus musculus ARNT interacting protein (Aint) mRNA |
| AF093542 | Trailer CAGCTA, Position 1703 Mus musculus transforming acidic coiled-coil containing protein 3 |
| TGAGCTGTAA count=2 | |
| AF099973 | Trailer CCCCCC, Position 1392 Mus musculus schlafen2 (Slfn2) mRNA |
| TGATGCACTC count=2 | |
| M84147 | Trailer GGGAGA, Position 1117 Mouse alcohol dehydrogenase-B2 (Adh-2) mRNA |
| TGCCGAGCTG count=2 | |
| AF240630 | Trailer CTGAAT, Position 5950 Mus musculus IQ motif containing GTPase activating protein 1 |
| TGCCTGCATA count=2 | |
| AF188504 | Trailer GACACG, Position 740 Mus musculus LNV (Lnv) mRNA |
| TGCCTGCTTC count=2 | |
| U92972 | Trailer TGCCTC, Position 1463 Mus musculus protease-activated receptor 3 (PAR3) mRNA |
| TGCTGGGTCA count=2 | |
| AF124663 | Trailer CCAAGG, Position 1387 Mus musculus UbcM4 interacting protein 28 mRNA |
| TGGAAAGGCT count=2 | |
| U35650 | Trailer GCTGCT, Position 23 Mus musculus cationic amino acid transporter (mCAT2) mRNA |
| TGGAGAACCA count=2 | |
| M21019 | Trailer GCGCCA, Position 444 Mouse R-ras mRNA |
| TGGAGCCCAC count=2 | |
| Y15799 | Trailer AGACCA, Position 1473 Mus musculus mRNA for G-protein coupled receptor kinase 6-A. |
| Y15798 | Trailer AGACCA, Position 1490 Mus musculus mRNA for G-protein coupled receptor kinase 6-B. |
| Y15797 | Trailer AGACCA, Position 1468 Mus musculus mRNA for G-protein coupled receptor kinase 6-C. |
| AF040749 | Trailer AGACCA, Position 1516 Mus musculus G protein-coupled receptor kinase 6 |
| AF040748 | Trailer AGACCA, Position 1516 Mus musculus G protein-coupled receptor kinase 6 |
| AF040747 | Trailer AGACCA, Position 1516 Mus musculus G protein-coupled receptor kinase 6 |
| TGGAGCCCTG count=2 | |
| AF136277 | Trailer GAATCC, Position 1325 Mus musculus cathepsin Z precursor (Ctsz) mRNA |
| TGGAGGAGAC count=2 | |
| U93242 | Trailer TGGTGG, Position 953 Mus musculus Ubc6p homolog mRNA |
| TGGCAGTATA count=2 | |
| AJ006289 | Trailer TTTTAG, Position 1150 Mus musculus mRNA for bcl-10 protein. |
| AF134396 | Trailer TTTTAG, Position 1154 Mus musculus CARD-like apoptotic protein (Clap) mRNA |
| AF057701 | Trailer TTTTAG, Position 1154 Mus musculus CIPER protein (Ciper) mRNA |
| TGGCCATCCC count=2 | |
| AF190624 | Trailer CCAAGC, Position 1457 Mus musculus mdgl-1 mRNA |
| TGGCCCCCAT count=2 | |
| M29464 | Trailer GTGTGG, Position 416 Mouse platelet-derived growth factor A chain (PDGFA) mRNA |
| TGGCTCCTAC count=2 | |
| U96116 | Trailer AGGCAT, Position 666 Mus musculus amyloid beta-peptide binding protein (ERAB) mRNA |
| TGGGGAAGAA count=2 | |
| AF237981 | Trailer GGAAGG, Position 2289 Mus musculus oxysterol 7alpha-hydroxylase (Cyp39A1) mRNA |
| TGGGGGCCCC count=2 | |
| AB026497 | Trailer AAGGCA, Position 7160 Mus musculus MysPDZ mRNA for myosin containing PDZ domain |
| TGGGTGTTCT count=2 | |
| U77415 | Trailer GGATGT, Position 2158 Mus musculus Bop1 mRNA |
| TGGGTTGTGA count=2 | |
| AF041433 | Trailer GGAGGT, Position 33 Mus musculus bet3 (Bet3) mRNA |
| TGTAATCATA count=2 | |
| AF041054 | Trailer ATCCAG, Position 985 Mus musculus E1B 19K/Bcl-2-binding protein homolog (Nip3) mRNA |
| TGTATAAGCC count=2 | |
| AF102578 | Trailer CTCCAC, Position 3307 Mus musculus intracellular chloride channel protein (Clic) mRNA |
| TGTATCTTAA count=2 | |
| X89998 | Trailer TAAAAA, Position 2433 M.musculus mRNA for 17 beta-hydroxysteroid dehydrogenase type IV. |
| TGTATTATAA count=2 | |
| AF302503 | Trailer GTTATC, Position 3484 Mus musculus pellino 1 (Peli1) mRNA |
| TGTCATCATG count=2 | |
| AF167987 | Trailer TGAAGT, Position 4860 Mus musculus hormonally upregulated neu tumor-associated kinase |
| AF055919 | Trailer TGAAGT, Position 4870 Mus musculus putative serine/threonine protein kinase MAK-V (Mak-v) |
| TGTCCTCTGC count=2 | |
| AF192785 | Trailer TTTGCT, Position 2840 Mus musculus makorin 1 (Mkrn1) mRNA |
| TGTCTCCTGG count=2 | |
| AF084259 | Trailer GTCCTT, Position 1926 Mus musculus bromodomain-containing protein BP75 mRNA |
| TGTGCGGTCT count=2 | |
| M18934 | Trailer TGCAAG, Position 461 Mouse T lymphocyte-like antigen CD2 mRNA |
| TGTGGGGAAA count=2 | |
| AF031939 | Trailer GATAAA, Position 2057 Mus musculus RalBP1-associated EH domain protein Reps1 (reps1) |
| TTAAAAGAAA count=2 | |
| Y16894 | Trailer AAAGAA, Position 1623 Mus musculus mRNA for hus1+-like protein. |
| TTAAACAATA count=2 | |
| AB041551 | Trailer ACTTAT, Position 1994 Mus musculus brain cDNA |
| TTAAGAGATA count=2 | |
| AF209906 | Trailer ACATGA, Position 947 Mus musculus receptor activity modifying protein 2 mRNA |
| TTAGCTCTCT count=2 | |
| D50263 | Trailer GCTCCC, Position 1244 Mus musculus DAN mRNA |
| TTAGTGGCTC count=2 | |
| L37663 | Trailer TAGTAG, Position 1820 Mus musculus neuronal nicotinic acetylcholine receptor subunit |
| AF217650 | Trailer ATAGGA, Position 2637 Mus musculus NIMA-related serine/threonine kinase NEK7 mRNA |
| TTAGTTTCAT count=2 | |
| L07037 | Trailer GGAAGA, Position 2623 Mus musculus (clone E31.1 in pGEM7Zf(+)) |
| TTATCTTATA count=2 | |
| U57413 | Trailer CTGTCC, Position 1845 Mus musculus mRNA |
| U40930 | Trailer CTGTCC, Position 1853 Mus musculus oxidative stress-induced protein mRNA |
| TTATTAGGAA count=2 | |
| X97575 | Trailer TACAAG, Position 370 M.musculus mRNA for ubiquitin-conjugating enzyme. |
| U31934 | Trailer TACAAG, Position 333 Mus musculus ubiquitin conjugating enzyme homolog mRNA |
| TTCAGAGCTT count=2 | |
| X62701 | Trailer TCCACC, Position 839 M.musculus muPAR2 mRNA. |
| TTCAGGACTG count=2 | |
| AF058955 | Trailer GAGTCA, Position 757 Mus musculus ATP-specific succinyl-CoA synthetase beta subunit |
| TTCGAAATCC count=2 | |
| AF226873 | Trailer TAGACT, Position 2280 Mus musculus small GTP-binding protein RAB1A mRNA |
| TTCGTGGAGT count=2 | |
| X64587 | Trailer TCACCT, Position 1344 M.musculus mRNA for splicing factor U2AF (65 kD). |
| TTCTCAAAAA count=2 | |
| AF276918 | Trailer CATCCT, Position 128 Mus musculus glutaredoxin 2 (Grx2) mRNA |
| TTCTCTGGCA count=2 | |
| AF037260 | Trailer GGGACC, Position 3999 Mus musculus non-receptor protein tyrosine kinase Ack mRNA |
| TTCTGATTCC count=2 | |
| AF267535 | Trailer TGCCGT, Position 1503 Mus musculus CUG-binding protein LYLQ isoform mRNA |
| TTCTTTAACT count=2 | |
| AJ297526 | Trailer CATTTA, Position 3373 Mus musculus mRNA for Sac1p protein. |
| TTGGAAAAAA count=2 | |
| AF006196 | Trailer AAAAAA, Position 2790 Mus musculus metalloprotease-disintegrin MDC15 mRNA |
| TTGGCTTGTT count=2 | |
| AF035209 | Trailer CCGAGT, Position 783 Mus musculus putative v-SNARE Vti1a mRNA |
| TTGGGGGAGA count=2 | |
| AF079527 | Trailer GAGGGA, Position 1553 Mus musculus IER5 (Ier5) mRNA |
| TTGTAGAAAT count=2 | |
| L04289 | Trailer GAAAAT, Position 6987 Mus musculus cyclophilin-related protein mRNA |
| TTGTCCTGAT count=2 | |
| X75343 | Trailer TCCTGT, Position 1578 M.musculus (BALB/c) RFP mRNA. |
| TTGTGTGTTT count=2 | |
| M33975 | Trailer CCTGCT, Position 25 Mouse salivary protein 2 mRNA |
| AF128535 | Trailer GACAGT, Position 3190 Mus musculus cytoplasmic phosphoprotein PACSIN2 mRNA |
| TTTACAGGTG count=2 | |
| U08215 | Trailer ACGTGC, Position 1547 Mus musculus Hsp70-related NST-1 (hsr.1) mRNA |
| TTTATTTTAA count=2 | |
| U91317 | Trailer TCCTGT, Position 15 Mus musculus IgM heavy chain variable region mRNA |
| X67190 | Trailer TCCTGT, Position 37 M.musculus mRNA (5G12-6) for autoantibody (V-region heavy chain). |
| TTTATTTTTG count=2 | |
| AB027147 | Trailer ATTAAT, Position 2219 Mus musculus mUGT1 mRNA for UDP-galactose transporter 1 |
| TTTCCATATC count=2 | |
| AF030559 | Trailer AAGCGA, Position 1640 Mus musculus ATP synthase beta-subunit (beta-F1 ATPase) mRNA |
| TTTCGGACTC count=2 | |
| U63337 | Trailer TGGGGA, Position 794 Mus musculus cyclin-dependent kinase-2 alpha (Cdk2-alpha) mRNA |
| AJ223732 | Trailer TGGGGA, Position 912 Mus musculus mRNA for cyclin dependent kinase (CDK2L) - the 39 kDa |
| TTTCTGCCTC count=2 | |
| S70056 | Trailer AGCCGT, Position 1372 zeta-crystallin [Mus musculus=mice |
| D78646 | Trailer AGCCCT, Position 887 Mouse mRNA for zeta-crystallin/quinone reductase |
| TTTCTGGCTC count=2 | |
| D78647 | Trailer CACTCA, Position 2330 Mouse mRNA for phospholipase A2 |
| TTTGAGCCCA count=2 | |
| AF188613 | Trailer CTCGTC, Position 1261 Mus musculus channel activating protease 1 mRNA |
| TTTGAGGTGG count=2 | |
| AF068707 | Trailer ATAACT, Position 2351 Mus musculus gamma2-adaptin (G2ad) mRNA |
| TTTGGAGGAA count=2 | |
| X71327 | Trailer AAAACA, Position 2513 M. musculus mRNA for MRE-binding transcription factor. |
| TTTGGTGAAG count=2 | |
| Y17852 | Trailer TGGCCA, Position 116 Mus musculus mRNA for ganglioside-induced differentiation |
| TTTGGTGGTT count=2 | |
| AJ238894 | Trailer TTCTTA, Position 1024 Mus musculus mRNA for mitochondrial acyl-CoA thioesterase |
| AJ238893 | Trailer TTCTTA, Position 1037 Mus musculus mRNA for mitochondrial acyl-CoA thioesterase |
| AB028898 | Trailer TTCTTA, Position 986 Mus musculus mRNA for U8 |
| TTTGTGGGAA count=2 | |
| U05343 | Trailer GTGGCA, Position 1391 Mus musculus Balb/c zinc finger protein PZF (Pzf) mRNA |