Annotation
- Annotation
- Identified tags
| ATGCTAGTCT count=455 | |
| L31609 | Trailer TTGTAC, Position 226 Mus musculus (clone mcori-1ck9) S29 ribosomal protein mRNA |
| AATGCCCTCA count=224 | |
| U29402 | Trailer TTAAAG, Position 191 Mus musculus acidic ribosomal phosphoprotein P1 mRNA |
| TGCAACTGTT count=208 | |
| U11248 | Trailer AAATAA, Position 266 Mus musculus C57BL/6J ribosomal protein S28 mRNA |
| TGTGCAGGGT count=154 | |
| M21495 | Trailer ATTAAC, Position 1513 Mouse cytoskeletal gamma-actin mRNA |
| X13055 | Trailer ATTAAC, Position 1455 Murine mRNA for cytoplasmic gamma-actin. |
| AF195094 | Trailer ATTAAC, Position 1571 Mus musculus gamma actin-like protein (Actl) mRNA |
| AGTCTTTAAA count=149 | |
| M62952 | Trailer ATAAAA, Position 638 Mus musculus ribosomal protein L19 |
| GGTGCCACCC count=135 | |
| M33330 | Trailer ACTCCT, Position 426 Mouse insulinoma (rig) mRNA |
| GAGAGGGCAA count=128 | |
| X15962 | Trailer ACCACG, Position 339 Mouse mRNA for ribosomal protein S12. |
| AATGATGAGG count=117 | |
| M19141 | Trailer ACAAAC, Position 1748 Mouse heat shock protein 70 cognate mRNA |
| U27129 | Trailer ACAAAC, Position 1713 Mus musculus breast heat shock 73 protein (hsc73) mRNA |
| TGCATATGGA count=111 | |
| M17516 | Trailer TGATGG, Position 818 Mouse lactate dehydrogenase A-4 (LDH-A) mRNA |
| U13687 | Trailer TGATGG, Position 1618 Mus musculus DBA/2J lactate dehydrogenase-A (LDH-A) mRNA |
| AGGCTACTAC count=109 | |
| X05021 | Trailer AAAGTT, Position 336 Murine mRNA with homology to yeast L29 ribosomal protein gene. |
| GAGAAGATGC count=107 | |
| X80699 | Trailer AGGAGT, Position 464 M.musculus L26 mRNA. |
| TGCGGTGACT count=101 | |
| X57961 | Trailer TGATGT, Position 662 M.musculus mRNA for ribosomal protein L7. |
| X60289 | Trailer TGATGT, Position 452 M.musculus mRNA for ribosomal protein S24. |
| TTTGCCGGCA count=100 | |
| M81745 | Trailer AGCAGC, Position 123 Mouse 1400 base pair ubiquitin mRNA |
| X51703 | Trailer AGCAGC, Position 917 Mouse mRNA for ubiquitin. |
| TACAATGAAG count=98 | |
| M37761 | Trailer CTCTGA, Position 312 Mouse calcyclin mRNA |
| X66449 | Trailer CTCTGA, Position 405 M.musculus mRNA for calcyclin. |
| X52278 | Trailer CTCTGA, Position 321 Mouse 5B10 mRNA for calcyclin. |
| AAGTCGTGCT count=95 | |
| D26610 | Trailer TCTGGC, Position 171 Mouse mRNA for monoclonal nonspecific suppressor factor beta |
| X65922 | Trailer TCTGGC, Position 159 M.musculus fau mRNA. |
| AF147745 | Trailer TCTGGC, Position 225 Mus musculus monoclonal non-specific suppressor factor beta mRNA |
| CGCAGGCGCA count=92 | |
| U28917 | Trailer AGGCCC, Position 116 Mus musculus 60S ribosomal protein (A52) mRNA |
| CTGACCACAT count=88 | |
| AF260271 | Trailer GAACAA, Position 637 Mus musculus 60S ribosomal Protein L9 mRNA |
| CATCTGCATT count=87 | |
| X15267 | Trailer TGCGGC, Position 884 Mouse mRNA for acidic ribosomal phosophoprotein PO. |
| TGACTCCCTC count=87 | |
| M11944 | Trailer TTCTGG, Position 69 Mouse serum induced RNA with partial B2 repeat and consensus of the |
| M30250 | Trailer TTCTGG, Position 518 Mouse RNA polymerase III-associated B2 repeat. |
| M11284 | Trailer TTCTGG, Position 1224 Mouse MHC class I Qa-Tla mRNA |
| L00606 | Trailer TTCTGG, Position 1217 Mus musculus MHC class I Qa-1a antigen mRNA |
| M31450 | Trailer TTCTGG, Position 4 Mouse B2 repetitive sequence mRNA |
| M31447 | Trailer TTCTGG, Position 45 Mouse B2 repetitive sequence mRNA |
| M31446 | Trailer TTCTGG, Position 66 Mouse B2 repetitive sequence mRNA |
| M31444 | Trailer TTCTGG, Position 70 Mouse B2 repetitive sequence mRNA |
| D29802 | Trailer AATTGA, Position 890 Mouse mRNA for G protein beta subunit homologue |
| X75313 | Trailer AATTGA, Position 896 M.musculus (C57BL/6) GB-like mRNA. |
| X13605 | Trailer ACCATA, Position 832 Murine mRNA for replacement variant histone H3.3. |
| M73436 | Trailer GAGGAA, Position 711 Mouse ribosomal protein S4 (Rps4) mRNA |
| TATCACCTGT count=74 | |
| X06407 | Trailer CACCAT, Position 627 Mouse mRNA for 21 kd polypeptide under translational control. |
| GTCGTTCTGG count=69 | |
| M22432 | Trailer TAAGAA, Position 1197 Mus musculus protein synthesis elongation factor Tu (eEF-Tu |
| X13661 | Trailer TAAGAA, Position 1174 Mouse mRNA for elongation factor 1-alpha (EF 1-alpha). |
| ATCTTGTGAA count=68 | |
| M20632 | Trailer AACCCA, Position 1617 Mouse LLRep3 protein mRNA from a repetitive element |
| AF283559 | Trailer AACCCA, Position 811 Mus musculus ribosomal protein S2 mRNA |
| GCATTGCCAA count=68 | |
| Y00225 | Trailer GGAGGA, Position 1192 Murine mRNA for J1 protein |
| ACAGAGCTGG count=67 | |
| AF085809 | Trailer GAAGAT, Position 3408 Mus musculus synapsin Ib (SynI) mRNA |
| AGCAAGCAGG count=66 | |
| J04181 | Trailer AGTACG, Position 1130 Mouse A-X actin mRNA |
| M12481 | Trailer AGTACG, Position 990 Mouse cytoplasmic beta-actin mRNA. |
| X03765 | Trailer AGTACG, Position 990 Mouse mRNA for cytoplasmatic beta-actin (pAL 41; AA 27-375). |
| X03672 | Trailer AGTACG, Position 1148 Mouse cytoskeletal mRNA for beta-actin. |
| AGCGGTGGGA count=62 | |
| Y00348 | Trailer ATGACA, Position 184 Mouse mRNA for ribosomal protein S6. |
| TGATGCCCTC count=61 | |
| M36402 | Trailer TTCTGG, Position 86 Mouse B2 repetitive sequence mRNA. |
| J03293 | Trailer TTCTGG, Position 2163 Mouse skeletal muscle phosphorylase kinase |
| D17630 | Trailer TTCTGG, Position 1782 Mouse mRNA for interleukin-8 receptor (IL-8R) |
| M31445 | Trailer TTCTGG, Position 66 Mouse B2 repetitive sequence mRNA |
| U34071 | Trailer TTCTGG, Position 2742 Mus musculus alpha-galactosidase A mRNA |
| U19119 | Trailer TTCTGA, Position 2042 Mus musculus G-protein-like LRG-47 mRNA |
| U16958 | Trailer TTCTGG, Position 1183 Mus musculus pre-T cell receptor alpha-type chain precursor mRNA |
| M29016 | Trailer GGAAAC, Position 669 Mouse ribosomal protein L7 (rpL7) mRNA |
| M11686 | Trailer GAGTGG, Position 1269 Mouse endo B cytokeratin mRNA |
| M36376 | Trailer GAGTGG, Position 1264 Mouse keratin D mRNA |
| CGGGAGGTGT count=58 | |
| X75895 | Trailer GCGGCT, Position 149 M.musculus mRNA for ribosomal protein L36. |
| CCGACACCAA count=57 | |
| D25213 | Trailer GGAGAT, Position 306 Mouse rpS17 mRNA for ribosomal protein S17 |
| ACCACCAAGG count=52 | |
| X56135 | Trailer ACTTGA, Position 203 Mouse mRNA for prothymosin alpha. |
| AATGTGCGGA count=51 | |
| U93863 | Trailer TTGAGC, Position 300 Mus musculus ribosomal protein L21 mRNA |
| ACCATCCTGA count=51 | |
| AB016424 | Trailer TTATAT, Position 1016 Mus musculus rbm3 mRNA |
| CCAGACTGGT count=51 | |
| M76763 | Trailer TCCTGA, Position 256 Mus musculus ribosomal protein (Ke-3) mRNA |
| AATAAAGTGG count=50 | |
| M60456 | Trailer GTTTTT, Position 849 Mouse cyclophilin mRNA |
| X58990 | Trailer GTTTTT, Position 975 Mouse mCyP-S1 mRNA for cyclophilin CyP-S1. |
| ATTTATGGAG count=48 | |
| X53333 | Trailer GTTCTG, Position 654 Mouse mRNA for triosephosphate isomerase (EC 5.3.1.1). |
| GGAGACATTG count=48 | |
| U93864 | Trailer TCACAG, Position 371 Mus musculus ribosomal protein S11 mRNA |
| TGCGCTTCCA count=48 | |
| Z85979 | Trailer GAGTGC, Position 348 M.musculus mRNA for histone H3.3A. |
| X91866 | Trailer GAGTGC, Position 627 M.musculus mRNA for H3.3A variant histone. |
| CCCCTCCCCC count=47 | |
| U88550 | Trailer GCTGGT, Position 4308 Mus musculus protocadherin 2C mRNA |
| TTCCATCCCT count=47 | |
| L06465 | Trailer TCTGCT, Position 475 Mus musculus cytochrome oxidase subunit VIa (liver-type isoform) |
| U08440 | Trailer TCTGCT, Position 465 Mus musculus Balb/c cytochrome c oxidase subunit VIaL mRNA |
| AAAGCCCGGA count=45 | |
| X73829 | Trailer AAGGCA, Position 609 M.musculus mRNA for ribosomal protein S8. |
| AAGCAAAAAA count=45 | |
| X83590 | Trailer AAAAAA, Position 325 M.musculus mRNA for ribosomal protein L5 |
| GATGAAGAAC count=44 | |
| U48364 | Trailer CTGTTA, Position 6141 Mus musculus muscle-specific transcriptional activator alpha-NAC |
| U22151 | Trailer CTGTTA, Position 190 Mus musculus translational regulatory factor alpha NAC/1.9.2. |
| CGGAAGAAGA count=43 | |
| M88335 | Trailer TGATGG, Position 468 M.musculus mRNA sequence. |
| CCCTCCCACA count=41 | |
| M36829 | Trailer GAATAG, Position 2387 Mouse heat-shock protein hsp84 mRNA. |
| M18186 | Trailer GAATAG, Position 2397 Mouse 84 kD heat shock protein mRNA |
| CCGCGAGGCC count=40 | |
| U67770 | Trailer CGGAAG, Position 265 Mus musculus ribosomal protein S26 (RPS26) mRNA |
| AATAAATGTG count=39 | |
| X02389 | Trailer ATTTTT, Position 2274 Mouse mRNA for urokinase. |
| AF155821 | Trailer TGAATT, Position 4255 Mus musculus CPG16 (Cpg16) mRNA |
| AF155820 | Trailer TGAATT, Position 1652 Mus musculus doublecortin-like protein (Dcl) mRNA |
| AF155819 | Trailer TGAATT, Position 5203 Mus musculus doublecortin-like kinase (Dclk) mRNA |
| AGGAGGGTCT count=39 | |
| D90151 | Trailer ATTTCC, Position 1299 Mouse mRNA for CArG-binding factor-A |
| GTTCCAAAGC count=39 | |
| J05277 | Trailer CAGAAG, Position 4054 Mouse hexokinase mRNA |
| TTTACTTCTA count=39 | |
| X06406 | Trailer CAGAGA, Position 675 Mouse mRNA for translational controlled 40 kDa polyyeptide p40. |
| AF140348 | Trailer CAGAGA, Position 683 Mus musculus 37kDa oncofetal antigen mRNA |
| ACCGACCGCA count=38 | |
| U76253 | Trailer TCGAGA, Position 757 Mus musculus E25B protein mRNA |
| AB030204 | Trailer TCGAGA, Position 573 Mus musculus mRNA for E25B protein |
| AB030203 | Trailer TCGAGA, Position 777 Mus musculus mRNA for E25B protein |
| AAGTCCTTTG count=36 | |
| AF214527 | Trailer TGAAAG, Position 258 Mus musculus ribosomal protein L27 (RPL27) mRNA |
| AGCCCTAATC count=36 | |
| M21836 | Trailer CTCTGG, Position 1640 Mouse extra-embryonic endodermal cytokeratin type II (EndoA) mRNA |
| M22831 | Trailer CTCTGG, Position 1587 Mouse keratin type II (EndoA) mRNA |
| CTGGTGTCCT count=36 | |
| U41341 | Trailer TGACCG, Position 151 Mus musculus endothelial monocyte-activating polypeptide I mRNA |
| ATAAGAGGCA count=35 | |
| X53824 | Trailer CGTGAT, Position 746 Mouse X16 mRNA. |
| GACCCATCAG count=35 | |
| AF060089 | Trailer GTGTTT, Position 463 Mus musculus proteasome subunit C8 (Psma3) mRNA |
| AF055983 | Trailer GTGTTT, Position 495 Mus musculus proteasome alpha7/C8 subunit mRNA |
| TGCATGCCCT count=35 | |
| J04716 | Trailer GGGTTC, Position 511 Mouse ferritin light chain |
| TAGGCACTAC count=34 | |
| M22479 | Trailer ATATGT, Position 1564 Mouse tropomyosin isoform 2 mRNA |
| TGAAATGAAC count=34 | |
| AB037665 | Trailer CAGCCC, Position 319 Mus musculus rpl38 mRNA for ribosomal protein L38 |
| TGCGTATGGC count=34 | |
| X74856 | Trailer GGCCAT, Position 383 M.musculus L28 mRNA for ribosomal protein L28. |
| AAGTTTAAAT count=33 | |
| X16053 | Trailer GACTGT, Position 392 Mouse mRNA for thymosin beta-4. |
| AGAGAAGCAG count=32 | |
| M19381 | Trailer ATATTG, Position 561 Mouse calmodulin (Cam I) mRNA |
| X61432 | Trailer ATATTG, Position 401 M.musculus mRNA for calmodulin. |
| AGTATAATAA count=32 | |
| AF283667 | Trailer AGGAGT, Position 1703 Mus musculus phosphoglycerate mutase 1 (Pgam1) mRNA |
| TGACGTGCCG count=32 | |
| M32599 | Trailer CCTGGA, Position 770 Mouse glyceraldehyde-3-phosphate dehydrogenase mRNA |
| ACCATTTCCG count=31 | |
| X52803 | Trailer ACTGTG, Position 506 Mouse mRNA for cyclophilin (EC 5.2.1.8). |
| AGAATAGCCA count=31 | |
| M58661 | Trailer CGTTTG, Position 1358 Mouse M1/69-J11d heat stable antigen mRNA |
| X53825 | Trailer CGTTTG, Position 1308 M.musculus mRNA for heat stable antigen. |
| ATGGTGTAAT count=31 | |
| AF073993 | Trailer AAGACA, Position 1529 Mus musculus heterogenous nuclear ribonucleoprotein A2/B1 (hnRNP |
| CTCCTTGTCA count=31 | |
| U43206 | Trailer AGTACA, Position 1141 Mus musculus phosphatidylethanolamine binding protein mRNA |
| AB046417 | Trailer AGTACA, Position 1144 Mus musculus HCNPpp mRNA for hippocampal cholinergic |
| TGATGATGAG count=31 | |
| AF029844 | Trailer GAGGAA, Position 361 Mus musculus elongation factor 1-beta homolog mRNA |
| ACTCTGGAGT count=30 | |
| L75822 | Trailer TCAGCG, Position 605 Mus musculus follistatin-like protein (mac25) mRNA |
| AB012886 | Trailer TCAGCG, Position 627 Mus musculus mRNA for mac25 |
| AAAATTGAAC count=29 | |
| Z46757 | Trailer ACCCAG, Position 432 M.musculus mRNA for high mobility group 2 protein. |
| AAGGTCGGAA count=29 | |
| D00611 | Trailer AGAAAT, Position 328 Mus musculus mRNA for basigin |
| Y16258 | Trailer AGAAAT, Position 270 Mus musculus mRNA for basigin III |
| Y16257 | Trailer AGAAAT, Position 324 Mus musculus mRNA for basigin II |
| Y16256 | Trailer AGAAAT, Position 328 Mus musculus mRNA for basigin |
| ATGACGCTGA count=29 | |
| M99167 | Trailer ATAAAT, Position 1329 Mouse rearranged RNA binding protein (FLI-2) mRNA |
| D86729 | Trailer ATAAAT, Position 1294 Mouse mRNA for topoisomerase-inhibitor suppressed |
| D86728 | Trailer ATAAAT, Position 1138 Mouse mRNA for topoisomerase-inhibitor suppressed |
| TGACGCCCTC count=29 | |
| M36411 | Trailer TTCTGG, Position 1149 Mouse Mpv17 mRNA |
| U56773 | Trailer TTCTGG, Position 2438 Mus musculus pelle-like protein kinase mRNA |
| AF103876 | Trailer TTCTGG, Position 2698 Mus musculus pelle-like protein kinase mRNA |
| GTGTGTTGTC count=28 | |
| U67771 | Trailer TGGAGG, Position 354 Mus musculus ribosomal protein L8 (RPL8) mRNA |
| TTCGACACAG count=28 | |
| X81987 | Trailer AGAAGG, Position 717 M.musculus mRNA for TAX responsive element binding protein 107. |
| CACATCTCAA count=27 | |
| M93980 | Trailer AGAAGT, Position 533 Mouse 24.6 kda protein mRNA |
| X75312 | Trailer AGAAGT, Position 526 M.musculus (C57BL/6) QM mRNA. |
| GTAAAATTAG count=27 | |
| M76124 | Trailer ACGAAC, Position 1246 Mus musculus EGP314 precursor mRNA |
| TGTGTAAATG count=27 | |
| D87896 | Trailer GGGACG, Position 540 Mus musculus phgpx mRNA for phospholipid hydroperoxide glutathione |
| AF045769 | Trailer GGGACG, Position 349 Mus musculus myocardium phospholipid hydroperoxide glutathione |
| AF045768 | Trailer GGGACG, Position 458 Mus musculus testis phospholipid hydroperoxide glutathione |
| ACCTTTGTCT count=26 | |
| D26091 | Trailer GATAGC, Position 2251 Mus musculus mRNA for mCDC47 |
| ATGTTATTCA count=26 | |
| U37721 | Trailer ATTCCA, Position 326 Mus musculus cytochrome c oxidase subunit VIII precursor (Cox8l) |
| CATTGGAGGG count=26 | |
| AJ223070 | Trailer CAAGTC, Position 2142 Mus musculus mRNA for TCF-4 protein. |
| CCACGTATCC count=26 | |
| D10916 | Trailer TGGGCC, Position 84 Mus musculus NEDD-6 mRNA |
| U12403 | Trailer TGGGCC, Position 372 Mus musculus Csa-19 mRNA |
| AAGGTGGGAG count=25 | |
| AF197951 | Trailer ATGCCA, Position 181 Mus musculus thioredoxin peroxidase PMP20 mRNA |
| AF124994 | Trailer ATGCCA, Position 270 Mus musculus peroxisomal membrane protein 20 mRNA |
| AF110733 | Trailer ATGCCA, Position 107 Mus musculus peroxiredoxin 5 (Prdx5) mRNA |
| AB041573 | Trailer ATGCCA, Position 514 Mus musculus brain cDNA |
| ATGTGAGCAT count=25 | |
| X76772 | Trailer CGTGGA, Position 621 M.musculus mRNA for ribosomal protein S3. |
| GCAGAACCAG count=25 | |
| L21027 | Trailer GGCATC, Position 1532 Mus musculus A10 mRNA |
| TTTGTGAAGA count=25 | |
| D50527 | Trailer CCCTGA, Position 271 Mouse mRNA for TI-225 |
| AAGAAATACA count=24 | |
| U27316 | Trailer CATAAT, Position 964 Mus musculus adenine nucleotide translocase-2 (Ant2) mRNA |
| U10404 | Trailer CATAA , Position 879 Mus musculus adenine nucleotide translocase mRNA |
| X70847 | Trailer CATAAT, Position 966 M.musculus mRNA for adenine nucleotide translocase. |
| AGGGAAGCAG count=24 | |
| L31642 | Trailer ACATT , Position 450 Mus musculus calmodulin (CamC) mRNA |
| CTGGGTACTG count=24 | |
| L04280 | Trailer CACAGT, Position 471 Mus musculus ribosomal protein (Rpl12) mRNA |
| GTGACTGGGT count=24 | |
| M37829 | Trailer GGCCAT, Position 455 Mouse mitochondrial cytochrome c oxidase subunit IV (COX IV) mRNA |
| X54691 | Trailer GGCCAT, Position 457 Mouse COX4 mRNA for cytochrome c oxidase subunit IV (EC 1.9.3.1). |
| TGCAGGAGGA count=24 | |
| U20326 | Trailer TGAAGC, Position 321 Mus musculus cellular nucleic acid binding protein mRNA |
| Z11871 | Trailer TGAAGC, Position 285 M.musculus mRNA for cellular nucleic acid binding protein. |
| Z11870 | Trailer TGCCTG, Position 285 M.musculus mRNA for cellular nucleic acid binding protein. |
| X63866 | Trailer TGCCTG, Position 285 Mus musculus mRNA for cellular nucleic acid binding protein. |
| ATCTTTTCTA count=23 | |
| X68193 | Trailer AAACAA, Position 555 M.musculus mRNA for nucleoside diphoshate kinase B. |
| GCTCATGGAT count=23 | |
| AF224264 | Trailer ATTTTT, Position 1642 Mus musculus pigpen protein mRNA |
| CTGGTAATGC count=22 | |
| X61232 | Trailer ACTTTG, Position 1826 Mouse mRNA for carboxypeptidase H. |
| TAGCTTTCTT count=22 | |
| U92454 | Trailer TTCATT, Position 493 Mus musculus WW domain binding protein 5 mRNA |
| TGCCGCAAGT count=22 | |
| AF118402 | Trailer GCTACG, Position 303 Mus musculus ubiquitin/60S ribosomal fusion protein mRNA |
| TGTGGAGAAT count=22 | |
| U15571 | Trailer GTACAG, Position 3575 Mus musculus amyloid precursor-like protein 2 isoform 751 |
| Z27070 | Trailer GTACAG, Position 3422 M.musculus (balb/c) mRNA for putative protein. |
| AAGCCCTTCT count=21 | |
| X77585 | Trailer TCCATT, Position 185 M.musculus mRNA for thioredoxin. |
| ATGAGGGAGT count=21 | |
| X03040 | Trailer TCCGGT, Position 954 Mouse mRNA for initiation factor eIF-4A long form. |
| X03039 | Trailer TCCGGT, Position 951 Mouse mRNA for initiation factor eIF-4AI. |
| ATGCTAAAAG count=21 | |
| X65704 | Trailer GAGATA, Position 195 M.musculus mRNA for small nuclear ribonucleoprotein E. |
| ATGCTCCTGC count=21 | |
| AB025408 | Trailer AGCTGA, Position 996 Mus musculus mRNA for sid478p |
| ATTACCATTA count=21 | |
| AF108397 | Trailer GAATAT, Position 18 Mus musculus sodium/calcium exchanger isoform NaCa2 (Ncx1) mRNA |
| AF108396 | Trailer GAATAT, Position 18 Mus musculus sodium/calcium exchanger isoform NaCa3 (Ncx1) mRNA |
| CCCAACAATG count=21 | |
| M28732 | Trailer TCAAGA, Position 60 Mouse beta-tubulin gene M-beta-5 |
| TGTCTGTGTG count=21 | |
| J04696 | Trailer CTGCCT, Position 935 Mouse glutathione S-transferase class mu (GST5-5) mRNA |
| AGCTGAAGGT count=20 | |
| Z50159 | Trailer TCATGG, Position 205 M.musculus mRNA for Sui1. |
| CATATACCCA count=20 | |
| M88756 | Trailer TTAATA, Position 20 M.musculus mRNA polyA site sequence. |
| U11027 | Trailer TTAATA, Position 171 Mus musculus C57BL/6J Sec61 protein complex gamma subunit mRNA |
| GCCCTCTACA count=20 | |
| X80899 | Trailer TGGCCT, Position 323 M.musculus mRNA for cytochrome C oxidase subunit VII homologue. |
| TTGTGTCAGT count=20 | |
| X61433 | Trailer CAGGTT, Position 1933 M.musculus mRNA for sodium/potassium ATPase beta subunit. |
| TTGTTGTGAG count=20 | |
| L29441 | Trailer TGTGTG, Position 1944 Mus musculus mRNA |
| AF181684 | Trailer TGTGTG, Position 2147 Mus musculus membrane protein TMS-1 mRNA |
| GCCATTGGTG count=19 | |
| D16432 | Trailer TAGCGG, Position 138 Mouse murine CD63 mRNA for murine homologue of CD63/ME491 |
| AF159427 | Trailer TAGCGG, Position 109 Mus musculus tetraspanin membrane protein CD63 mRNA |
| GCCTGCACAT count=19 | |
| L02913 | Trailer CAGCCC, Position 311 Mouse growth factor-induced delayed early response protein |
| L10613 | Trailer CAGCCC, Position 337 Mus musculus glycosylation-inhibiting factor mRNA |
| L07607 | Trailer CAGCCC, Position 241 Mus musculus migration inhibitory factor (10K protein) mRNA |
| Z23048 | Trailer CAGCCC, Position 258 M.musculus macrophage migration inhibitory factor. |
| TCCTCAGCAT count=19 | |
| M10062 | Trailer TTTCTT, Position 2429 Mouse IgE-binding factor mRNA |
| AGGCCTTTAG count=18 | |
| U27340 | Trailer AGCGAT, Position 2059 Mus musculus sulfated glycoprotein (Sgp1) mRNA |
| CATCTGTGTA count=18 | |
| L19661 | Trailer GTTTCT, Position 1266 Mus musculus (clones pB1001 |
| X97982 | Trailer GTTTCT, Position 1314 M.musculus mRNA for poly(C)-binding protein |
| X75947 | Trailer GTTTCT, Position 1260 M.musculus mCBP mRNA. |
| TCACTCAGCA count=18 | |
| U70494 | Trailer ACAAGT, Position 895 Mus musculus histone H2A.Z (H2A.Z) mRNA |
| TTGACGCTAA count=18 | |
| X53068 | Trailer ATGCAG, Position 1191 Mouse mRNA for proliferating cell nuclear antigen. |
| AGTTGCCTGA count=17 | |
| U34259 | Trailer TTTCCC, Position 1168 Mus musculus lysosome-associated protein |
| TAAAAAAAAA count=17 | |
| L07049 | Trailer AAAAAA, Position 7358 Mus musculus aggrecan mRNA |
| TACAAATGTG count=17 | |
| X03688 | Trailer GTGGAA, Position 139 Mouse mRNA fragment for elongation factor TU (N-terminus). |
| TGCATCGTGA count=17 | |
| U60824 | Trailer CCAAAG, Position 692 Mus musculus proteasome beta-subunit C5 (Psmb1) mRNA |
| X80686 | Trailer CCAAAG, Position 681 M.musculus mRNA for C5 component of protease. |
| TGCCCACCAT count=17 | |
| AF119675 | Trailer ATTCCT, Position 911 Mus musculus small GTP-binding protein RAB25 (Rab25) mRNA |
| AATATTTATT count=16 | |
| X58486 | Trailer GATGTG, Position 367 M.musculus mRNA for cytochrome c oxidase subunit VIIa. |
| AF037371 | Trailer GATGTG, Position 409 Mus musculus cytochrome c oxidase subunit VIIa-L precursor (Cox7al) |
| ATCCTTGTGT count=16 | |
| U14648 | Trailer TGTGAA, Position 1731 Mus musculus putative myelin regulatory factor 1 mRNA |
| AF077858 | Trailer TGTGAA, Position 1710 Mus musculus splicing factor SC35 mRNA |
| TCTGGCAGTG count=16 | |
| M33212 | Trailer GAGGAA, Position 928 Mouse nucleolar protein N038 mRNA |
| TTTGGAAACA count=16 | |
| M63114 | Trailer TCAAAA, Position 3239 Mouse surfeit locus surfeit 4 protein mRNA |
| AGGGACCACG count=15 | |
| X65553 | Trailer AACAGA, Position 2168 M.musculus mRNA for poly(A) binding protein. |
| AGTGGCTTTG count=15 | |
| U65636 | Trailer AATGAA, Position 782 Mus musculus beta proteasome subunit (Lmp3) mRNA |
| CCCACTTATG count=15 | |
| M24509 | Trailer TGACTT, Position 482 Mouse ferritin heavy chain |
| J03941 | Trailer TGACTT, Position 499 Mouse ferritin heavy chain (MFH) mRNA |
| X12812 | Trailer TGACTT, Position 445 Murine mRNA for macrophage ferritin heavy subunit. |
| GTGTACTTCA count=15 | |
| L32751 | Trailer TTGGGA, Position 777 Mouse (clone M1) GTPase (Ran) mRNA |
| AF159256 | Trailer TTGGGA, Position 752 Mus musculus Lps/Ran GTPase (lps(d)) mRNA |
| TGTATTGTTC count=15 | |
| Z19599 | Trailer TTACTG, Position 1674 M.musculus epsilon 14-3-3 isoform mRNA. |
| D87663 | Trailer TTACTG, Position 1620 Mus musculus mRNA for 14-3-3 epsilon |
| TTTTTTTTTT count=15 | |
| D89571 | Trailer TTTTTT, Position 2395 Mus musculus mRNA for ryudocan core protein |
| AACAAGAGCA count=14 | |
| AF202048 | Trailer CTGTAC, Position 1499 Mus musculus NM23-M7 (Nm23-M7) mRNA |
| CACACGGAAG count=14 | |
| X13333 | Trailer GGGAAA, Position 1292 Mouse CD14 mRNA for myelid cell-specific leucine-rich glycoprotein. |
| CCCATTGCTG count=14 | |
| M32015 | Trailer TGGGCG, Position 1194 Mouse lysosomal membrane glycoprotein-type A (lgp-120) mRNA |
| CTACTGTGGA count=14 | |
| J04633 | Trailer TGACAC, Position 2367 Mouse heat shock protein 86 mRNA |
| X16857 | Trailer TGACAC, Position 731 Mouse mRNA for HSP86 heat-shock protein. |
| GCCACCTACC count=14 | |
| M13805 | Trailer GCCGTC, Position 456 Mouse type I epidermal keratin mRNA |
| M28698 | Trailer GCAGCC, Position 1192 Mus musculus cytokeratin No. 19 mRNA |
| X03492 | Trailer GCAGCC, Position 804 Mouse mRNA for type I 47 kd keratin. |
| AF053235 | Trailer GCCGTC, Position 1239 Mus musculus keratin 16 mRNA |
| AB013608 | Trailer GCCGTC, Position 1165 Mus musculus mRNA for cytokeratin 17 |
| AACAAGAAAT count=13 | |
| X14425 | Trailer GTTATG, Position 428 Mouse mRNA for profilin. |
| AACACCGCAA count=13 | |
| M13964 | Trailer CCTTTC, Position 1244 Mouse stimulatory G protein of adenylate cyclase |
| Y00703 | Trailer CCTTTC, Position 1298 Mouse uncoupled S49 cells mRNA for stimulatory GTP-binding protein |
| AF116268 | Trailer CCTTTC, Position 2386 Mus musculus G-protein XLalphas mRNA |
| AF107848 | Trailer CCTTTC, Position 2202 Mus musculus neuroendocrine-specific golgi protein p55 isoform 2 |
| AB041808 | Trailer CCTTTC, Position 1531 Mus musculus brain cDNA |
| AATCAGAGAT count=13 | |
| AF190797 | Trailer TCAGTT, Position 844 Mus musculus actin-related protein 11 (Arp11) mRNA |
| AGACAAATGT count=13 | |
| AF073992 | Trailer GTCTGC, Position 1816 Mus musculus heterogenous nuclear ribonucleoprotein U (hnRNP U) |
| ATCCACCTGC count=13 | |
| U78085 | Trailer TCACTG, Position 359 Mus musculus ribosomal protein S5 mRNA |
| Y12431 | Trailer TCACTG, Position 349 M.musculus mRNA for ribosomal protein S5. |
| CACATGAGGA count=13 | |
| Y12474 | Trailer GATACT, Position 292 M.musculus mRNA for centrin gene. |
| CTCAGTCACA count=13 | |
| L57509 | Trailer CACCCC, Position 3347 Mus musculus Cak receptor kinase mRNA |
| AF026259 | Trailer CACCCC, Position 3331 Mus musculus receptor-like tyrosine kinase (Nep) mRNA |
| CTTGCCAGTG count=13 | |
| Z31557 | Trailer TAAAAC, Position 2117 M.musculus (129/Sv) Cctz mRNA for CCT (chaperonin containing TCP-1) |
| GTCGTGACAG count=13 | |
| X65627 | Trailer ATACTC, Position 1634 M.musculus mRNA TNZ2 for p68 RNA helicase. |
| TCTCTTGCCA count=13 | |
| Z31555 | Trailer CCCAGA, Position 1647 M.musculus (129/Sv) Ccte mRNA for CCT (chaperonin containing TCP-1) |
| TCTGAGTTCA count=13 | |
| AJ278064 | Trailer CAACGG, Position 1906 Mus musculus mRNA for beta |
| AJ272020 | Trailer AGGCCA, Position 602 Mus musculus partial mRNA for 20S proteasome subunit C2 (Psma1 |
| AF294899 | Trailer CAACGG, Position 1908 Mus musculus beta |
| TTGACCACTC count=13 | |
| D00472 | Trailer ATGGAA, Position 1043 Mus musculus mRNA for cofilin |
| TTTGGGGGAA count=13 | |
| X80421 | Trailer TTGTTA, Position 91 M.musculus tex190 mRNA (3'region). |
| AACATCATTG count=12 | |
| Z23055 | Trailer CAGCAG, Position 258 M.musculus protein-tyrosine-phosphatase mRNA |
| AAGGAGGTAG count=12 | |
| AF030343 | Trailer ATATGG, Position 602 Mus musculus peroxisomal/mitochondrial dienoyl-CoA isomerase ECH1p |
| ACTCCTTTTG count=12 | |
| M16229 | Trailer AGGAAA, Position 967 Mouse mitochondrial malate dehydrogenase (mMDH) mRNA |
| AGTCTATGAG count=12 | |
| D78188 | Trailer TCAATA, Position 2419 Mouse mRNA for SCID complementing gene 2. |
| AGTGTTTAAA count=12 | |
| U07617 | Trailer TAAAAA, Position 2341 Mus musculus Grb2 adaptor protein (grb2) mRNA |
| D85748 | Trailer TAAAAA, Position 2216 Mouse mRNA for Grb3-3 |
| CAGGCGGCCA count=12 | |
| D90362 | Trailer AGAACT, Position 2517 Mouse mRNA for cadherin-associated protein (CAP102/alpha catenin). |
| X59990 | Trailer AGAACT, Position 2526 M.musculus alpha-catenin gene for alpha-catenin. |
| CCCTGGATAC count=12 | |
| L25674 | Trailer ATGGTC, Position 1566 Mus musculus ear-2 transcription factor mRNA |
| X76654 | Trailer ATGGTC, Position 1660 M.musculus mRNA for EAR2. |
| CGGATTGGAG count=12 | |
| D31717 | Trailer CCAATG, Position 1691 Mouse MARib mRNA for ribophorin |
| CTCCAGCTCC count=12 | |
| Z31399 | Trailer ATCAGC, Position 1584 M.musculus Ccth mRNA for CCT eta subunit (chaperonin containing |
| CTGGGGCTGG count=12 | |
| U19604 | Trailer AATGCT, Position 3153 Mus musculus DNA ligase I mRNA |
| U04674 | Trailer AATGCT, Position 2906 Mus musculus DNA ligase I mRNA |
| GAGCGCATGG count=12 | |
| M12573 | Trailer TGCAGG, Position 300 Mouse heat shock protein (hsp68) mRNA |
| M12572 | Trailer TGCAGG, Position 417 Mouse heat shock protein (hsp68) mRNA |
| M12571 | Trailer TGCAGG, Position 879 Mouse heat shock protein (hsp68) mRNA |
| GATAGTCAAG count=12 | |
| J04806 | Trailer CAAGTT, Position 789 Mus musculus osteopontin mRNA |
| X13986 | Trailer CAAGTT, Position 735 Mouse mRNA for minopontin. |
| X16151 | Trailer CAAGTT, Position 942 Mouse mRNA for early T-lymphocyte activation 1 protein (ETa-1). |
| TGACACCCTC count=12 | |
| M36401 | Trailer TTCTGG, Position 85 Mouse B2 repetitive sequence mRNA. |
| AF127662 | Trailer TTCTGG, Position 2398 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase |
| AF127661 | Trailer TTCTGG, Position 2367 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase |
| AF127660 | Trailer TTCTGG, Position 2424 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha |
| AF127659 | Trailer TTCTGG, Position 2479 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase |
| AF127658 | Trailer TTCTGG, Position 2479 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha |
| AF127657 | Trailer TTCTGG, Position 2270 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase |
| AF127656 | Trailer TTCTGG, Position 2327 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha |
| TGCAACCCTA count=12 | |
| M18626 | Trailer TAGGTG, Position 292 Mouse long interspersed reptative mRNA. |
| TGGTTCCTGA count=12 | |
| X15963 | Trailer GCCCAA, Position 249 Mouse mRNA for cytochrome c oxidase subunit Va. |
| TGTAATTTCT count=12 | |
| AB025406 | Trailer TCTCTA, Position 1339 Mus musculus mRNA for sid23p |
| TTCCCGTTGG count=12 | |
| D21252 | Trailer CCGCTC, Position 499 Mouse mRNA for OSF-3 |
| D16142 | Trailer CCGCTC, Position 495 Mouse mRNA for MSP23. |
| AAGGGCGACA count=11 | |
| D63423 | Trailer CATCTG, Position 972 Mouse mRNA for annexin V |
| U29396 | Trailer CATCTG, Position 991 Mus musculus annexin V (Anx5) mRNA |
| AAGGTCTCCA count=11 | |
| AF031568 | Trailer TGCAAA, Position 1332 Mus musculus heterogeneous nuclear ribonucleoprotein G (Hnrnpg) |
| AGAATTAAAT count=11 | |
| AF044222 | Trailer TTGTAT, Position 2476 Mus musculus HCG-1 protein (HCG-1) mRNA |
| AGGAGCTGGC count=11 | |
| L19737 | Trailer ATTGGC, Position 245 Mus musculus H+ ATP synthase subunit c mRNA |
| ATTAGGGGTT count=11 | |
| AF099020 | Trailer TGGTCT, Position 1024 Mus musculus hepatocyte growth factor activator inhibitor type 2 |
| AF099019 | Trailer TGGTCT, Position 951 Mus musculus hepatocyte growth factor activator inhibitor type 2 |
| AF099016 | Trailer TGGTCT, Position 1122 Mus musculus hepatocyte growth factor activator inhibitor type 2 |
| CCTAGAGCCA count=11 | |
| AF171080 | Trailer GCACAT, Position 1342 Mus musculus histone macroH2A1.2 variant mRNA |
| AF123312 | Trailer GCACAT, Position 315 Mus musculus core histone MacroH2A.1 mRNA |
| CTGCCCTGAG count=11 | |
| U51679 | Trailer CACACC, Position 813 Mus musculus thioredoxin peroxidase (Tpx) mRNA |
| U20611 | Trailer CACACC, Position 838 Mus musculus thioredoxin-dependent peroxide reductase (tpx) mRNA |
| X82067 | Trailer CACACC, Position 845 M.musculus mRNA for thiol-specific antioxidant. |
| GTCAGTGACA count=11 | |
| U21489 | Trailer GCTAGA, Position 1275 Mus musculus long-chain acyl-CoA dehydrogenase mRNA |
| TCAGTTCTGT count=11 | |
| M88755 | Trailer GTTTAC, Position 768 M.musculus mRNA polyA site sequence. |
| AF011644 | Trailer GTTTAC, Position 870 Mus musculus oral tumor suppressor homolog (Doc-1) mRNA |
| TGCAATGAGG count=11 | |
| X70303 | Trailer CTGGCT, Position 710 M.musculus MC3 mRNA for proteasome. |
| AF099733 | Trailer CTGGCT, Position 633 Mus musculus proteasome subunit C3 (Psma2) mRNA |
| TTAAGAGATA count=11 | |
| AF209906 | Trailer ACATGA, Position 947 Mus musculus receptor activity modifying protein 2 mRNA |
| TTCAGCAGAT count=11 | |
| U05333 | Trailer ATTAGA, Position 236 Mus musculus co-chaperonin 'cofactor A' mRNA |
| TTGAGAGAAG count=11 | |
| AF039663 | Trailer GAACTG, Position 3546 Mus musculus AC133 antigen homolog mRNA |
| AF026269 | Trailer GAACTG, Position 3472 Mus musculus prominin mRNA |
| AACCTCATTT count=10 | |
| AF269151 | Trailer ATTTAT, Position 2478 Mus musculus transmembrane protein TM9SF3 (Tm9sf3) mRNA |
| AAGGTATGTA count=10 | |
| Z11664 | Trailer TGTTAT, Position 5102 M.musculus mRNA for son of sevenless 2. |
| AATAAACCGT count=10 | |
| M11310 | Trailer TTTGAT, Position 3039 Mouse adenine phosphoribosyltransferase (APRT) |
| AATGTGTAGA count=10 | |
| M20617 | Trailer TGCCAT, Position 1410 Mouse ornithine decarboxylase mRNA |
| M12330 | Trailer TGCCAT, Position 843 Mouse kidney ornithine decarboxylase mRNA |
| M10624 | Trailer TGCCAT, Position 2111 Mouse ornithine decarboxylase mRNA |
| ACCACCCCTG count=10 | |
| Z31553 | Trailer TTAAGC, Position 1648 M.musculus (129/Sv) Cctb mRNA for CCT (chaperonin containing TCP-1) |
| AB041570 | Trailer TTAAGC, Position 1528 Mus musculus brain cDNA |
| ACGTTCTGAT count=10 | |
| D86726 | Trailer TGAGCT, Position 2441 Mouse mRNA for mMIS5 |
| AGCTTCATCA count=10 | |
| M14220 | Trailer AGCAAC, Position 1687 Mouse neuroleukin mRNA |
| L09104 | Trailer AGCAAC, Position 2897 Mus musculus glucose phosphate isomerase mRNA |
| AGGAGTACCA count=10 | |
| AF072243 | Trailer AATAAG, Position 1664 Mus musculus methyl-CpG binding protein MBD2 (Mbd2) mRNA |
| AGGTTGAGGG count=10 | |
| Z31556 | Trailer GCAGCC, Position 1835 M.musculus (129/Sv) Cctg mRNA for CCT (chaperonin containing TCP-1) |
| AGTAAATTAC count=10 | |
| X16319 | Trailer ATGATA, Position 2079 Mouse mRNA for 54K subunit of signal recognition particle. |
| ATAATTGCTG count=10 | |
| AF004565 | Trailer TATCAT, Position 785 Mus musculus dUTPase mRNA |
| CAACTCCAAT count=10 | |
| M16465 | Trailer TCAACA, Position 479 Mouse calpactin I light chain (p11) mRNA |
| CAGTATCTGA count=10 | |
| L13791 | Trailer AAGACC, Position 1083 Mus musculus (clone Chop11) C/ATF mRNA |
| M94087 | Trailer AAGACC, Position 1245 M.musculus mATF4 (mTR67) mRNA |
| X61507 | Trailer AAGACC, Position 1255 M.musculus ATF-4 gene for activating transcription factor 4. |
| AB012277 | Trailer AAGACC, Position 726 Mus musculus mRNA for ATF4 |
| CATGCACTGA count=10 | |
| AF223953 | Trailer TGCTGT, Position 1777 Mus musculus ARL-6 interacting protein-1 mRNA |
| CCAGAAGGAG count=10 | |
| AB041654 | Trailer CTAGAG, Position 2530 Mus musculus brain cDNA |
| CCCGTGCCCC count=10 | |
| X97490 | Trailer TGCCTA, Position 819 M.musculus mRNA for PNG protein. |
| CCCTTTCCTC count=10 | |
| M63170 | Trailer ATTGAG, Position 528 Mouse alpha-B crystallin mRNA. |
| CCTACCTACA count=10 | |
| AF067395 | Trailer ACCCTA, Position 838 Mus musculus NIX (Nix) mRNA |
| CGATGCCCTC count=10 | |
| U01663 | Trailer TTTAGT, Position 1887 Mus musculus clone M5 transcription factor USF2 mRNA |
| CGGGGGTTCA count=10 | |
| L08115 | Trailer ATTTAT, Position 896 Mus musculus antigen (homologue of human CD9 antigen) mRNA |
| CTGTACAGCC count=10 | |
| U04443 | Trailer AGTGTG, Position 48 Mus musculus non-muscle myosin light chain 3 (MLC3nm) mRNA |
| CTTGCAATAC count=10 | |
| AB041651 | Trailer CCTGTG, Position 1362 Mus musculus brain cDNA |
| GTGTGTGTCT count=10 | |
| D83037 | Trailer GCGTGC, Position 1297 Mouse mRNA for 14-3-3 zeta |
| D87660 | Trailer GCGTGC, Position 1346 Mus musculus mRNA for 14-3-3 zeta |
| TCAGGGCAGA count=10 | |
| D63707 | Trailer AATGAT, Position 1424 Mouse mRNA for hepatoma derived growth factor (HDGF) |
| AF251787 | Trailer AATGAT, Position 1583 Mus musculus TDRM1 protein (Tdrm1) mRNA |
| TCCCTGAGTT count=10 | |
| X06115 | Trailer CGAGGC, Position 3867 Mouse mRNA for E-cadherin (= uvomorulin |
| AF284437 | Trailer CCATCA, Position 1924 Mus musculus TIGIRR-1 mRNA |
| AF176531 | Trailer CCCCTC, Position 960 Mus musculus F-box protein FBX16 mRNA |
| TGACCACATG count=10 | |
| Z16406 | Trailer TCCTAC, Position 258 Mus musculus Mox-2A mRNA. |
| TGCTAGAGCT count=10 | |
| M30779 | Trailer GTAATA, Position 517 Mouse glucose-regulated protein 78 mRNA |
| D78645 | Trailer GTAATA, Position 2068 Mouse mRNA for 78 kDa glucose-regulated protein |
| M19351 | Trailer GTAATA, Position 437 Mouse immunoglobulin heavy chain binding protein mRNA |
| AJ002387 | Trailer GTAATA, Position 1987 Mus musculus mRNA for BiP. |
| TGGAACACCA count=10 | |
| AF004591 | Trailer ACTGCT, Position 314 Mus musculus copper transport protein Atox1 (ATOX1) mRNA |
| TGGTATGAAC count=10 | |
| U51167 | Trailer ATCGGC, Position 1085 Mus musculus isocitrate dehydrogenase mRNA |
| TGTTGTGGTG count=10 | |
| AF270646 | Trailer GGAACA, Position 902 Mus musculus c14orf1-like protein mRNA |
| TTCAAGAAGG count=10 | |
| U43918 | Trailer AAAAGG, Position 452 Mus musculus proliferation-associated protein 1 mRNA |
| X84789 | Trailer AAAAGG, Position 358 M.musculus mRNA for p38-2G4. |
| TTCAGATTGA count=10 | |
| X12944 | Trailer TAATTC, Position 822 Mouse mRNA for HMG-17 chromosomal protein. |
| AACAGCGTTG count=9 | |
| AF271072 | Trailer CCTTCC, Position 880 Mus musculus TGF-beta receptor interacting protein 1 mRNA |
| AF188297 | Trailer CCTTCC, Position 903 Mus musculus TGF-beta receptor binding protein (Trip1) mRNA |
| ACTGACTCTT count=9 | |
| Y14196 | Trailer GGTCAA, Position 1560 Mus musculus mRNA for heterogeneous nuclear ribonucleoprotein H. |
| ACTGTCACTT count=9 | |
| D17653 | Trailer CAGAGG, Position 229 Mouse mRNA for HBp15/L22 |
| ATCCAGTCCA count=9 | |
| X15358 | Trailer ACGGGC, Position 349 Mouse mRNA for junD proto-oncogene. |
| ATGTGTACCC count=9 | |
| U92793 | Trailer AGGGGT, Position 3679 Mus musculus alpha glucosidase II alpha subunit mRNA |
| CAAGCAGCCC count=9 | |
| AF016271 | Trailer CAGCTG, Position 2626 Mus musculus Ksp-cadherin (Cdh16) mRNA |
| CACCAGCTGA count=9 | |
| M60419 | Trailer GAATTC, Position 1033 Mouse Y-box binding protein 1/DNA binding protein B mRNA |
| M62867 | Trailer GAATTC, Position 1033 Mouse Y box transcription factor (MSY-1) mRNA |
| X57621 | Trailer GAATTC, Position 938 M.musculus YB-1 mRNA. |
| U33197 | Trailer GAATTC, Position 1029 Mus musculus Y-box binding protein mYB-1b mRNA |
| AF038994 | Trailer GAATTC, Position 844 Mus musculus Y box transcription factor mRNA |
| CATACTGTGA count=9 | |
| L10905 | Trailer CTCCCG, Position 41 Mus musculus (clone Gcap27) mRNA sequence. |
| AF187066 | Trailer CTCCCG, Position 572 Mus musculus p75NTR-associated cell death executor (Nade) mRNA |
| AF097440 | Trailer CTCCCG, Position 567 Mus musculus brain expressed X-linked protein 3 (Bex3) mRNA |
| CCTATTATGG count=9 | |
| Y17345 | Trailer CAATGA, Position 388 Mus musculus mRNA for protein-tyrosine-phosphatase IF1. |
| Y17344 | Trailer CAATGA, Position 649 Mus musculus mRNA for protein-tyrosine-phosphatase IF2. |
| Y17343 | Trailer CAATGA, Position 388 Mus musculus mRNA for protein-tyrosine-phosphatase IF2P. |
| CCTCTGGGTC count=9 | |
| U16741 | Trailer ATGTCT, Position 1249 Mus musculus capping protein alpha 2 subunit mRNA |
| GACTCCAGAG count=9 | |
| AF095936 | Trailer ACGACT, Position 348 Mus musculus succinate dehydrogenase Ip subunit mRNA |
| GCAAGTGACA count=9 | |
| L13129 | Trailer CGAGTG, Position 1374 Mus musculus synexin mRNA |
| GTCTTGCCCA count=9 | |
| M69293 | Trailer GGTGTC, Position 646 Mouse Id2 protein (Id-2) mRNA |
| GTTTGGTTTT count=9 | |
| X58069 | Trailer GTTTTT, Position 1338 Mouse mRNA for Histone H2A.X. |
| TAACACCCTC count=9 | |
| M12185 | Trailer TTCTGC, Position 1181 Mouse class I MHC H2-D-beta transplantation antigen mRNA (b |
| K00129 | Trailer TTCTGC, Position 1181 Mouse MHC class I H2-D gene (haplotype b) |
| U47327 | Trailer TTCTGC, Position 1496 Mus musculus MHC class I heavy chain precursor (H-2D(k)) mRNA |
| U47326 | Trailer TTCTGC, Position 1505 Mus musculus MHC class I heavy chain precursor (H-2D(d)) mRNA |
| U47325 | Trailer TTCTGC, Position 1495 Mus musculus MHC class I heavy chain precursor (H-2D(b)) mRNA |
| X00246 | Trailer TTCTGC, Position 1265 Mouse mRNA with a Set 1 repetitive element for a class I major |
| TACATCACAC count=9 | |
| AB038243 | Trailer TCTACA, Position 204 Mus musculus mRNA for Arp2/3 complex subunit p21-Arc |
| TACTTCCTGA count=9 | |
| U27106 | Trailer GTGCTG, Position 2012 Mus musculus clathrin-associated AP-2 complex AP50 subunit mRNA |
| TAGTTCTATC count=9 | |
| AB028895 | Trailer AAATAC, Position 2674 Mus musculus mRNA for cell-surface sialomucin MGC-24 |
| TGTGAGGAGT count=9 | |
| U58888 | Trailer CGTTGT, Position 891 Mus musculus SH3-containing protein SH3P2 mRNA |
| TGTGGAGAAG count=9 | |
| AJ001633 | Trailer ATGATT, Position 1151 Mus musculus mRNA for annexin III. |
| TTTGGCACCA count=9 | |
| AF232717 | Trailer TTGGAA, Position 950 Mus musculus protein arginine N-methyltransferase 1 (Mrmt1) mRNA |
| AF232716 | Trailer TTGGAA, Position 1004 Mus musculus protein arginine N-methyltransferase 1 (Mrmt1) mRNA |
| TTTTAGGATG count=9 | |
| AF062071 | Trailer TTTGGG, Position 844 Mus musculus zinc finger protein ZNF216 mRNA |
| AAAAAAAAAA count=8 | |
| U95215 | Trailer AAAAAA, Position 1851 Mus musculus bile acid CoA: amino acid N-acyltransferase (Baat) |
| X82648 | Trailer AAAAAA, Position 878 M.musculus mRNA for apolipoprotein D. |
| AF218865 | Trailer AAAAAA, Position 2807 Mus musculus BETA3 mRNA |
| AF146227 | Trailer AAAAAA, Position 2880 Mus musculus MutS homolog 5 (Msh5) mRNA |
| AF107352 | Trailer AAAAAA, Position 2669 Mus musculus MSH5 (Msh5) mRNA |
| AB041581 | Trailer AAAAAA, Position 1864 Mus musculus brain cDNA |
| AATGTGTTCT count=8 | |
| U27267 | Trailer CATCTT, Position 1046 Mus musculus LPS-induced C-X-C chemokine LIX precursor |
| ACTTGTCAGT count=8 | |
| AB024935 | Trailer GTTCAG, Position 1145 Mus musculus Sid3177 mRNA |
| AGCCCCGCCT count=8 | |
| U94479 | Trailer GTCACA, Position 1694 Mus musculus integrin binding protein kinase mRNA |
| ATCACTAGCA count=8 | |
| AF157497 | Trailer GATGTC, Position 1184 Mus musculus unknown mRNA. |
| ATGGAAGCAG count=8 | |
| D49429 | Trailer ACATTC, Position 3182 Mouse NCBP-29 mRNA for PW29 |
| D37790 | Trailer ACATTC, Position 2555 Mouse mRNA for beta-1 |
| ATTAACGGGA count=8 | |
| M55272 | Trailer GACTGT, Position 42 Mouse precursor 18S ribosomal RNA |
| ATTGTTTGTG count=8 | |
| U91848 | Trailer ATTGAA, Position 936 Mus musculus clathrin light chain 2 mRNA |
| CAAAGACGCT count=8 | |
| AJ297390 | Trailer AGATGT, Position 3351 Mus musculus mRNA for twisted gastrulation protein (tsg gene). |
| CACATGCGTG count=8 | |
| AF141312 | Trailer TAGCAG, Position 222 Mus musculus hypoxia induced gene 1 (Hig1) mRNA |
| CACTGTGAAG count=8 | |
| AB021289 | Trailer GATGGC, Position 805 Mus musculus mRNA for epididymal secretory protein |
| CCTCCCAGAA count=8 | |
| X53337 | Trailer ACCTGC, Position 1584 Mouse mRNA for cathepsin D (EC 3.4.23.5). |
| X52886 | Trailer ACCTGC, Position 1644 M.musculus mRNA for cathepsin D. |
| CGTATTACCT count=8 | |
| AF097438 | Trailer ATTGTG, Position 765 Mus musculus brain expressed X-linked protein 1 (Bex1) mRNA |
| AF051347 | Trailer ATTGTG, Position 753 Mus musculus REX-3 mRNA |
| CTAGCTCAGA count=8 | |
| M26071 | Trailer GAGGCT, Position 1115 Mouse tissue factor (mtf) mRNA |
| CTCTTCCACG count=8 | |
| Y00516 | Trailer AGACAC, Position 308 Mouse mRNA for aldolase A. |
| CTGTGGATGA count=8 | |
| AF027707 | Trailer GGGGGT, Position 1374 Mus musculus apoptosis activator Mtd (Mtd) mRNA |
| CTGTGGTGGT count=8 | |
| D26177 | Trailer GGCAGG, Position 3036 Mouse mRNA for D-factor/LIF receptor |
| CTTGATGCCT count=8 | |
| U60288 | Trailer GTGCCT, Position 795 Mus musculus proteasome subunit iota mRNA |
| GAGTACTTTT count=8 | |
| X56548 | Trailer , Position 1325 M.musculus Np-b mRNA for purine-nucleoside phosphorylase. |
| GATGAGAATA count=8 | |
| AF036898 | Trailer TATGAA, Position 1584 Mus musculus DNA polymerase epsilon small subunit mRNA |
| GTGTTGTTTA count=8 | |
| U58633 | Trailer CCGTTG, Position 1043 Mus musculus p34 cdc2 kinase mRNA |
| X16461 | Trailer CCGTTG, Position 959 Mouse cdc2 mRNA for CDC2 kinase. |
| GTTGTAATTG count=8 | |
| AF017153 | Trailer TTGACA, Position 2754 Mus musculus putative RNA helicase and RNA dependent ATPase |
| TATTGAAAGT count=8 | |
| X00525 | Trailer CAGCCC, Position 4676 Mouse 28S ribosomal RNA. |
| TCTCAACTTT count=8 | |
| J00423 | Trailer AACTGG, Position 448 Mouse hypoxanthine phosphoribosyltransferase (hprt) mRNA |
| TGAAAATTGG count=8 | |
| X52940 | Trailer ATTAAA, Position 326 Mouse COX7c1 mRNA for cytochrome c oxidase VIIc (EC 1.9.3.1). |
| TGAATGTCCG count=8 | |
| AF304351 | Trailer AGAGAG, Position 910 Mus musculus eukaryotic translation elongation factor 1-delta mRNA |
| TGCCTGCCTC count=8 | |
| AF205540 | Trailer TTCCTC, Position 2690 Mus musculus intestinal low-affinity peptide transporter protein |
| TGTAACTTAA count=8 | |
| AF181116 | Trailer TGGCAA, Position 823 Mus musculus brain protein 44-like protein (Brp44l) mRNA |
| TGTGGATGGG count=8 | |
| AF033114 | Trailer AAGGCG, Position 443 Mus musculus strain C57BL/6J Siva-1 mRNA |
| AF033113 | Trailer AAGGCG, Position 356 Mus musculus Siva-1 mRNA |
| AF033112 | Trailer AAGGCG, Position 161 Mus musculus Siva-2 mRNA |
| TTCAAGAAGT count=8 | |
| Y08701 | Trailer GAAAGA, Position 2141 M.musculus mRNA for Pinin protein. |
| AACTCTTTGT count=7 | |
| U72141 | Trailer TTTGGC, Position 2796 Mus musculus multiple exostoses 2 protein (EXT2) mRNA |
| U67837 | Trailer TTTGGC, Position 2792 Mus musculus multiple exostosis protein (EXT2) mRNA |
| AAGGAAATAA count=7 | |
| X80937 | Trailer ATTCAA, Position 3622 M.musculus mRNA for RIP1 protein. |
| ACAAAGTTTG count=7 | |
| L01062 | Trailer AGAATG, Position 1547 Mouse ATP synthase alpha subunit |
| ACACCATTCC count=7 | |
| AF077527 | Trailer TGAAGT, Position 928 Mus musculus syntenin mRNA |
| AF003693 | Trailer TGAAGT, Position 964 Mus musculus scaffold protein Pbp1 homolog mRNA |
| ACCAAAGGTA count=7 | |
| AF238866 | Trailer CAGTTA, Position 734 Mus musculus LNR42 mRNA |
| ACCCCTCCTC count=7 | |
| M64298 | Trailer ATTCCA, Position 652 Mouse vacuolar H(+)-ATPase (mvp) mRNA |
| ACTCAGTGAA count=7 | |
| AF171100 | Trailer CAATCC, Position 1952 Mus musculus TBX1 protein mRNA |
| ACTTTATTTG count=7 | |
| L16846 | Trailer CTAGGG, Position 1079 Mus musculus B-cell translocation gene-1 protein (BTG1) mRNA |
| AGAAAAAAAA count=7 | |
| X62897 | Trailer AAAA , Position 533 Mus musculus mRNA for skeletal muscle chloride channel |
| X62896 | Trailer AAAA , Position 730 M.musculus mRNA (cDNA2) skeletal muscle chloride channel |
| Y12883 | Trailer AAAAAA, Position 1446 M.musculus mRNA for nonselenium glutathione peroxidase. |
| AGAACATTTG count=7 | |
| X14607 | Trailer TTCCAA, Position 325 Mouse SV-40 induced 24p3 mRNA. |
| AGGATTATGG count=7 | |
| M24554 | Trailer TCTCCC, Position 873 Mouse lipocortin I mRNA |
| X07486 | Trailer TCTCCC, Position 901 Mouse mRNA for lipocortin I. |
| AGGGTCAAGA count=7 | |
| AF062482 | Trailer CAAATC, Position 225 Mus musculus SDP3 mRNA |
| ATCACAAACT count=7 | |
| L07918 | Trailer CCCTCC, Position 699 Mus musculus GDP-dissociation inhibitor mRNA |
| ATGACAAGAT count=7 | |
| AF060090 | Trailer GTTTAA, Position 91 Mus musculus proteasome subunit C7-I (Psmb2) mRNA |
| ATGGCAAAGG count=7 | |
| U39302 | Trailer ATGACC, Position 1157 Mus musculus 26S proteasome subunit 4 ATPase mRNA |
| ATTAATGCCC count=7 | |
| U76112 | Trailer TTGAAG, Position 3620 Mus musculus translation repressor NAT1 mRNA |
| U63323 | Trailer CTGAAG, Position 3589 Mus musculus translation initiation factor (Eif4g2) mRNA |
| ATTGTGGCCC count=7 | |
| AF116911 | Trailer CGCCCC, Position 1295 Mus musculus thymic dendritic cell-derived factor 1 mRNA |
| CACACAATGG count=7 | |
| AF033186 | Trailer AGACCT, Position 850 Mus musculus WSB-1 mRNA |
| CAGTTACCAG count=7 | |
| Y08702 | Trailer AAGATG, Position 429 M.musculus mRNA for neuronal protein 15.6. |
| CCACCTCATC count=7 | |
| X53476 | Trailer TCATTT, Position 449 Mouse mRNA for non-histone chromosomal protein HMG-14. |
| CCCCCACCCC count=7 | |
| D87901 | Trailer ACC , Position 1091 Mouse mRNA for ARF4 |
| CCTGCATGCT count=7 | |
| D13473 | Trailer TGTTCT, Position 1665 Mouse mRNA for Rad51 protein. |
| CGAGCAGCCA count=7 | |
| L38847 | Trailer CATTCC, Position 4241 Mus musculus hepatoma transmembrane kinase ligand (HTK ligand) |
| CTACTAATAA count=7 | |
| M83741 | Trailer AACAAG, Position 649 Mouse cofactor mRNA. |
| CTATAAGTAA count=7 | |
| Y08460 | Trailer CCCCAA, Position 1750 Mus musculus mRNA for Mdes transmembrane protein. |
| CTGGACAGCA count=7 | |
| X61506 | Trailer GCAACA, Position 1398 Mouse E46 mRNA for E46 protein. |
| GACAGGTGAC count=7 | |
| AF004428 | Trailer ACTATT, Position 1151 Mus musculus tumor protein D53 (mD53) mRNA |
| GATGAAGATG count=7 | |
| AF045462 | Trailer ATAAGG, Position 2378 Mus musculus female sterile homeotic-related protein Frg-1 mRNA |
| GTTATTGCTC count=7 | |
| AB019212 | Trailer TTTCAT, Position 1431 Mus musculus mRNA for syntaxin 7 |
| GTTTCCCTTG count=7 | |
| AB025349 | Trailer CATGCC, Position 501 Mus musculus L2BP1/BAF mRNA for LAP2 binding protein 1 |
| TGCATCCCCA count=7 | |
| AF225564 | Trailer AAAGCA, Position 1021 Mus musculus aldehyde reductase (Akr1A4) mRNA |
| TGCATGTCTT count=7 | |
| U17961 | Trailer CATTGA, Position 787 Mus musculus p62 mRNA |
| U17046 | Trailer CATTGA, Position 776 Mus musculus p62 ras-GAP associated phosphoprotein mRNA |
| TTATAATGAT count=7 | |
| X95580 | Trailer TCTTAA, Position 3181 M.musculus mRNA for hypoxia-inducible factor I alpha. |
| AF003695 | Trailer TCTTAA, Position 3390 Mus musculus hypoxia-inducible factor 1 alpha (Hif1a) mRNA |
| TTTACAGGTG count=7 | |
| U08215 | Trailer ACGTGC, Position 1547 Mus musculus Hsp70-related NST-1 (hsr.1) mRNA |
| TTTGATAAAA count=7 | |
| X59379 | Trailer AAAAAT, Position 2836 Mouse mRNA for amyloid beta precursor (protease nexin II). |
| AAAATGTGGT count=6 | |
| D55720 | Trailer GCCAGA, Position 1684 Mouse mRNA for nuclear pore-targeting complex |
| U34229 | Trailer GCCAGA, Position 1507 Mus musculus pendulin mRNA |
| U12270 | Trailer GCCAGA, Position 1622 Mus musculus pendulin (pendulin) mRNA |
| AAGGACATTT count=6 | |
| AF019661 | Trailer AAGAAG, Position 777 Mus musculus zeta proteasome chain mRNA |
| AAGGCCTTTC count=6 | |
| D30687 | Trailer TGTCCT, Position 616 Mouse mRNA for preadipocyte growth factor (glutathione |
| X53451 | Trailer TGTCCT, Position 575 Mouse mRNA for glutathione S-transferase II (EC 2.5.1.18). |
| AATAAGATGG count=6 | |
| X81443 | Trailer AATGGT, Position 823 M.musculus SIG-92 mRNA. |
| Y15522 | Trailer AATGGT, Position 747 Mus musculus mRNA for MNUDC protein. |
| ACATAAAACT count=6 | |
| X63535 | Trailer TTTGTC, Position 4032 M.musculus ufo mRNA. |
| ACATTGTGCC count=6 | |
| U39077 | Trailer ATATGA, Position 1446 Mus musculus thymopoietin gamma mRNA |
| U39076 | Trailer ATATGA, Position 1557 Mus musculus thymopoietin delta mRNA |
| U39075 | Trailer ATATGA, Position 1653 Mus musculus thymopoietin epsilon mRNA |
| U39074 | Trailer ATATGA, Position 1773 Mus musculus thymopoietin beta mRNA |
| ACCCCCAATT count=6 | |
| X54966 | Trailer GTATGG, Position 707 M.musculus ctsB gene (3' end) for cathepsin B. |
| ACCCGTCATA count=6 | |
| AF043120 | Trailer AAATCT, Position 1565 Mus musculus beta prime coatomer protein mRNA |
| ACCTTTGACA count=6 | |
| U68564 | Trailer GCATGA, Position 777 Mus musculus NAD(H)-specific isocitrate dehydrogenase gamma subunit |
| ACTGTGCGCC count=6 | |
| AB000713 | Trailer CCCTCC, Position 1522 Mus musculus mCPE-R mRNA for CPE-receptor |
| ACTGTGTTGG count=6 | |
| M91458 | Trailer ACACTC, Position 2003 Mus musculus sterol-carrier protein X mRNA |
| AGAAGGAGAT count=6 | |
| J02622 | Trailer ACTCTG, Position 2205 Mouse mitochondrial aspartate aminotransferase isoenzyme mRNA |
| AGAATAATAA count=6 | |
| X01838 | Trailer ATATAA, Position 618 Mouse mRNA for beta2-microglobulin. |
| AGACAGTTAA count=6 | |
| U67327 | Trailer ACTGTG, Position 400 Mus musculus WD40-repeat type I transmembrane protein A72.5 mRNA |
| AF149822 | Trailer ACTGTG, Position 349 Mus musculus mitotic checkpoint protein BUB3 (Bub3) mRNA |
| AGCACAGACA count=6 | |
| AB041615 | Trailer CCATTT, Position 1859 Mus musculus brain cDNA |
| AGCTATGAAG count=6 | |
| AB039919 | Trailer AAGGAA, Position 559 Mus musculus rheb mRNA for Ras homolog |
| AGGAATCCAG count=6 | |
| U60593 | Trailer GCCAGG, Position 2762 Mus musculus cytoplasmic protein Ndr1 (Ndr1) mRNA |
| U52073 | Trailer GCCAGG, Position 2795 Mus musculus TDD5 mRNA |
| AGGCCTGAAC count=6 | |
| D85137 | Trailer CCGTCC, Position 1914 Mouse mRNA for PP1gamma |
| M27071 | Trailer CCGTCC, Position 1150 Mus musculus protein phosphatase type 1 (dis2m1) mRNA |
| U53456 | Trailer CCGTCC, Position 2006 Mus musculus protein phosphatase 1cgamma (PP1cgamma) mRNA |
| ATAAAAGTTC count=6 | |
| AF169300 | Trailer TATTAC, Position 2678 Mus musculus ring finger protein 4 (Rnf4) mRNA |
| ATAGTGGACG count=6 | |
| D83966 | Trailer TTGTTA, Position 7643 Mouse mRNA for protein tyrosine phosphatase |
| D28529 | Trailer TTGTTA, Position 4857 Mouse mRNA for protein tyrosine phosphatase DPZPTP |
| Z32740 | Trailer TTGTTA, Position 7606 M.musculus mRNA for protein tyrosine phosphatase PTP-BL. |
| ATCAGAGCCA count=6 | |
| AF171875 | Trailer CAGCTA, Position 1247 Mus musculus g1-related zinc finger protein (G1rp) mRNA |
| ATCATGGCAA count=6 | |
| Z37164 | Trailer AACCAG, Position 1654 M.musculus Cctq mRNA encoding cytosolic chaperone containing TCP-1 |
| ATGATAGCAG count=6 | |
| X53157 | Trailer CACAGA, Position 159 Mouse mRNA for mitochondrial cytochrome c oxidase subunit Vb. |
| ATTGAGAGCA count=6 | |
| AF078840 | Trailer AGCGAG, Position 601 Mus musculus 5'(3')-deoxyribonucleotidase (Nt) mRNA |
| CAAAAAAAAA count=6 | |
| AF200349 | Trailer AAA , Position 2566 Mus musculus GPR35 mRNA |
| AB031055 | Trailer AAA , Position 1180 Mus musculus DDP1 mRNA for deafness dystonia protein 1 |
| CACTGCTGGA count=6 | |
| AF192558 | Trailer AGTACC, Position 1186 Mus musculus domesticus mitochondrial carrier homolog 1 isoform b |
| AF176007 | Trailer AGTACC, Position 1135 Mus musculus domesticus mitochondrial carrier homolog 1 isoform a |
| CAGCTGGAAA count=6 | |
| U96746 | Trailer ACTGAA, Position 874 Mus musculus antioxidant enzyme AOE372 mRNA |
| CAGTATATGC count=6 | |
| M33934 | Trailer CTTGAA, Position 1617 Mouse IMP dehydrogenase mRNA |
| CATCCAATGG count=6 | |
| X56502 | Trailer CTTACC, Position 694 Mouse CKII beta mRNA for casein kinase II beta subunit. |
| X52959 | Trailer CTTACC, Position 700 Mouse mRNA for casein kinase II beta subunit (EC 2.7.1.37). |
| CCAGTAATGT count=6 | |
| U97327 | Trailer AAACAA, Position 1107 Mus musculus calcyclin binding protein (CACYBP) mRNA |
| CCAGTGAAGG count=6 | |
| M63903 | Trailer GTTTCT, Position 1714 Mus musculus B/HLH/Z protein (Myn) mRNA |
| CCCATCATCA count=6 | |
| AF176516 | Trailer TTCGCC, Position 1785 Mus musculus E2F1-inducible (Eig4) mRNA |
| CGAGATATAC count=6 | |
| U20532 | Trailer GCAGGA, Position 1716 Mus musculus p45 NF-E2 related factor 2 (Nrf 2) mRNA |
| CGGGTGTTGT count=6 | |
| X80332 | Trailer GCC , Position 683 M.musculus rab20 mRNA. |
| CTAAAGAAAG count=6 | |
| M73963 | Trailer ATTACG, Position 2195 Mus musculus UCR-motif DNA-binding protein (UCRBP) mRNA |
| CTCAAAAAAG count=6 | |
| X01023 | Trailer CCACCG, Position 1788 Mouse normal c-myc gene and translocated homologue from J558 |
| CTCAACAAGA count=6 | |
| AF111172 | Trailer TGCTAT, Position 1925 Mus musculus lysosomal pepstatin insensitive protease precursor |
| CTCTAGGGGT count=6 | |
| AB012276 | Trailer TATGGG, Position 799 Mus musculus mRNA for ATFx |
| CTGGCTGATG count=6 | |
| Y11460 | Trailer TGCTCA, Position 144 Mus musculus mRNA for b4 integrin interactor |
| AF108462 | Trailer TCCTCA, Position 681 Mus musculus b4 integrin interactor homolog mRNA |
| AF047046 | Trailer TCCTCA, Position 612 Mus musculus translation initiation factor eIF6 mRNA |
| CTGGGCCACA count=6 | |
| U66249 | Trailer ATAGCA, Position 1627 Mus musculus Cut alternatively spliced product (CASP) mRNA |
| CTTAGGTTTT count=6 | |
| L31958 | Trailer AACCCC, Position 668 Mus musculus (clone: pMAT1) mRNA |
| CTTTGGACCG count=6 | |
| J04953 | Trailer GGCCTT, Position 2176 Mouse gelsolin gene |
| GGCTGTGACA count=6 | |
| AF149820 | Trailer ACGACG, Position 669 Mus musculus p33ING1 protein mRNA |
| GGGGACAAAG count=6 | |
| X73361 | Trailer CGCGGC, Position 22 M.musculus mAES-2 mRNA. |
| GTGGACGAGG count=6 | |
| X79233 | Trailer TGGCCC, Position 1737 M.musculus EWS mRNA. |
| GTGGAGATGC count=6 | |
| AF220501 | Trailer TGGTGC, Position 411 Mus musculus PPARgamma cofactor 2 (Pgc2) mRNA |
| AF106473 | Trailer TGGTGC, Position 407 Mus musculus leucine-rich-domain inter-acting protein 1 (Leap1) |
| TATGAGTGAC count=6 | |
| M65037 | Trailer AG , Position 447 Mouse metastasis-reducing protein (nm23) mRNA |
| TCAAAACCAA count=6 | |
| AF053550 | Trailer AACCAC, Position 1039 Mus musculus metaxin 2 (Mtx2) mRNA |
| AB041562 | Trailer AACCAC, Position 1058 Mus musculus brain cDNA |
| TCTGGGCCTC count=6 | |
| AF099018 | Trailer TCGCAG, Position 1804 Mus musculus hepatocyte growth factor activator inhibitor type 1 |
| TCTTCCATGT count=6 | |
| AB025409 | Trailer TACAAG, Position 706 Mus musculus mRNA for sid1334p |
| TGACACAGGG count=6 | |
| X60671 | Trailer GCAGTC, Position 2575 M.musculus mRNA for ezrin. |
| TGGCTGGCCC count=6 | |
| AF144702 | Trailer CACTGA, Position 700 Mus musculus small zinc finger-like protein (Tim13) mRNA |
| TGTGCTATCT count=6 | |
| Z19543 | Trailer ATGCTC, Position 1183 M.musculus h2-calponin cDNA. |
| TGTGTGTTAT count=6 | |
| Y10874 | Trailer CAGCAA, Position 667 M.musculus mRNA for proteasome subunit MC14. |
| D83585 | Trailer CAGCAA, Position 653 Mouse mRNA for proteasome Z subunit |
| TGTTCATACA count=6 | |
| AF231925 | Trailer TTTTTG, Position 3204 Mus musculus COPI coatomer complex |
| TGTTTGAAAA count=6 | |
| M36830 | Trailer CAAA , Position 1024 Mouse heat-shock protein hsp86 mRNA. |
| TTCTCTGCCT count=6 | |
| AF162768 | Trailer ATATCA, Position 531 Mus musculus actin-related protein complex 1b (Arpc1b) mRNA |
| TTGCTGTATT count=6 | |
| U27838 | Trailer GTTACT, Position 3106 Mus musculus glycosyl-phosphatidyl-inositol-anchored protein |
| U18773 | Trailer GTTACT, Position 1792 Mus musculus GPI-anchored protein p137 mRNA |
| AAAATGTTCA count=5 | |
| U42386 | Trailer ATCTTT, Position 1065 Mus musculus fibroblast growth factor inducible gene 14 (FIN14) |
| AAAGAGCACA count=5 | |
| AF042822 | Trailer CTGGGG, Position 2606 Mus musculus epithin mRNA |
| AAAGTGGTAT count=5 | |
| L43326 | Trailer AGACAA, Position 4310 Mus musculus kinectin (CG-1) mRNA |
| AACAGGGAAG count=5 | |
| M96163 | Trailer CCAGCG, Position 2215 Mus musculus (clone 2) serum inducible kinase (SNK) mRNA |
| AACCTGAGGA count=5 | |
| Z54219 | Trailer AAATTG, Position 1029 M.musculus mRNA for mSUG1. |
| AAGAAGGAGG count=5 | |
| AF062655 | Trailer TGGGAA, Position 2484 Mus musculus plenty-of-prolines-101 mRNA |
| AAGCGGGAGG count=5 | |
| D29919 | Trailer AGAAAG, Position 31 Mouse mRNA for mouse transcription factor kA1 (A7) containing |
| D16631 | Trailer AGAAAG, Position 328 Mouse mRNA for transcription factor A1 |
| X17500 | Trailer AGAAAG, Position 381 Mouse mRNA for putative transcription factor of the insulin gene |
| ACAAAGTTGG count=5 | |
| D84096 | Trailer TTT , Position 3220 Mouse mRNA for ubiquitin carboxyl-terminal hydrolase (UBP) |
| ACAAATACAG count=5 | |
| X12507 | Trailer ATTCTG, Position 1373 Mouse eIF-4AII mRNA for protein synthesis initiation factor 4AII. |
| ACAAGCACAA count=5 | |
| X16646 | Trailer ATCTTT, Position 949 Mouse mRNA for Na |
| ACAGTCTTTC count=5 | |
| U52822 | Trailer AGCTAG, Position 266 Mus musculus ornithine decarboxylase antizyme mRNA |
| ACAGTTGCTT count=5 | |
| U48972 | Trailer CTAAGC, Position 3593 Mus musculus spindlin (Spin) mRNA |
| ACATCTATGA count=5 | |
| D43690 | Trailer GAAGTT, Position 434 Mouse mRNA for adrenodoxin |
| D43689 | Trailer GAAGTT, Position 439 Mouse mRNA for adrenodoxin |
| L29123 | Trailer GAAGTT, Position 461 Mus musculus adrenodoxin mRNA |
| ACCCAGAAGT count=5 | |
| D10024 | Trailer GGCTCT, Position 1044 Mouse mRNA for protein-tyrosine kinase substrate p36 (calpactin I |
| M14044 | Trailer GGCTCT, Position 1044 Mouse calpactin I heavy chain (p36) mRNA |
| ACCTCTAGAC count=5 | |
| X17069 | Trailer AGCCCC, Position 1870 Mouse mRNA for protein with homology to transition protein 2 (TP2). |
| X70887 | Trailer AGCCCC, Position 1908 M.musculus mRNA for p59 immunophilin. |
| ACGGTTTTCT count=5 | |
| AF181685 | Trailer CTGTAA, Position 2038 Mus musculus membrane protein TMS-2 mRNA |
| ACTTGTTATG count=5 | |
| AF092039 | Trailer TACATT, Position 745 Mus musculus steroid receptor RNA activator mRNA |
| AGAACAACAG count=5 | |
| AB027565 | Trailer ACAGTG, Position 3123 Mus musculus TXNRD1 mRNA for thioredoxin reductase 1 |
| AGAAGCTGGA count=5 | |
| D42068 | Trailer GGGTGT, Position 1750 Mouse mRNA for syntaxin binding protein muSec1 |
| U19520 | Trailer GGGTGT, Position 1772 Mus musculus vesicle transport protein (munc-18b) mRNA |
| AF263345 | Trailer GGGTGT, Position 1765 Mus musculus syntaxin binding protein Munc18-2 (Stxbp2) mRNA |
| AGGAAAAGTC count=5 | |
| Y15163 | Trailer ATACCG, Position 1642 Mus musculus mRNA for mrg1 protein. |
| AGGACTTGGT count=5 | |
| X62154 | Trailer GAAGCT, Position 2478 M. musculus mRNA for P1 protein (P1.m). |
| AGGAGTTCAA count=5 | |
| AB016257 | Trailer GGTCAT, Position 1888 Mus musculus mRNA for OCTN1 |
| AGGGCCAAGG count=5 | |
| U57746 | Trailer CATCCC, Position 787 Mus musculus platelet-activating factor acetylhydrolase isoform Ib |
| AGGTAACTGC count=5 | |
| U64450 | Trailer TTGCTA, Position 542 Mus musculus nucleophosmin/nucleoplasmin-3 (Npm3) mRNA |
| AGGTAGAGAG count=5 | |
| AF063847 | Trailer AGCTTG, Position 706 Mus musculus Smt3A protein mRNA |
| AGTTTCCTTG count=5 | |
| M14223 | Trailer ATTATT, Position 1992 Mouse ribonucleotide reductase M2 subunit mRNA |
| ATACCAAGAG count=5 | |
| AF182040 | Trailer GTGAGG, Position 1460 Mus musculus LAG protein (Lag) mRNA |
| ATATTCGGTC count=5 | |
| X63020 | Trailer AAGTCA, Position 421 M.musculus mRNA for U2-snRNP b'' (pRNP31). |
| X63019 | Trailer AAGTCA, Position 343 M.musculus mRNA for U2-snRNP b'' (pRNP11). |
| ATGTCTATGC count=5 | |
| AB021743 | Trailer TATCCG, Position 1357 Mus musculus mRNA for PR65 (type 2A serine/threonine protein |
| ATGTTCTTTC count=5 | |
| AF231110 | Trailer CGCAGG, Position 4537 Mus musculus muscleblind mRNA |
| ATTTCTTTGA count=5 | |
| U65313 | Trailer TGTGAA, Position 1612 Mus musculus ras-GTPase-activating protein SH3-domain binding |
| AF145285 | Trailer TGTGAA, Position 1710 Mus musculus RNA-binding protein isoform G3BP-2a (G3BP2) mRNA |
| ATTTTGTAAA count=5 | |
| D50463 | Trailer GTACAG, Position 1241 Mouse SDR1 mRNA |
| CAACAAAGGT count=5 | |
| X55023 | Trailer TGTGAG, Position 1576 Mouse cDNA for heat shock protein 65. |
| X53584 | Trailer TGTGAG, Position 1504 Mouse mRNA for HSP60 protein (clones 3T3-7 |
| CACGGACACC count=5 | |
| AF193794 | Trailer AAGTTA, Position 313 Mus musculus vacuolar sorting protein VPS29 mRNA |
| CAGCAGTTAA count=5 | |
| D78255 | Trailer AGCAGT, Position 578 Mouse mRNA for PAP-1 |
| CATGAAGTTT count=5 | |
| AF088911 | Trailer TCAGTC, Position 1226 Mus musculus protein phosphatase X (Ppx) mRNA |
| CATTTAATTA count=5 | |
| AF263458 | Trailer GAGAAC, Position 515 Mus musculus onzin mRNA |
| CATTTTAAAA count=5 | |
| M18209 | Trailer TTTGTA, Position 2420 Mouse transcription factor S-II |
| CCACTGGTTA count=5 | |
| AF004106 | Trailer GGAATA, Position 1082 Mus musculus unknown mRNA |
| CCATTACAGA count=5 | |
| D16580 | Trailer TGGTTG, Position 3633 Mouse mRNA for peptidylarginine deiminase |
| CCCTTTACCT count=5 | |
| AB029448 | Trailer TCTGGG, Position 2390 Mus musculus mRNA for Dlxin-1 |
| CCTGCTCCTC count=5 | |
| D32250 | Trailer CTCAAG, Position 991 Mouse mRNA for aldose reductase |
| L39795 | Trailer CTCAAG, Position 982 Mus musculus (clone MAR1) aldose reductase mRNA |
| U29152 | Trailer CTCAAG, Position 1001 Mus musculus aldose reductase mRNA |
| AF220100 | Trailer TGGAGG, Position 1098 Mus musculus PDZK1 mRNA |
| CGGAAGAAGT count=5 | |
| X99921 | Trailer AAAGCT, Position 342 M.musculus mRNA for S100 calcium-binding protein A13. |
| CTAACCTAAG count=5 | |
| M32017 | Trailer ATGCCT, Position 960 Mouse lysosomal membrane glycoprotein type B (lgp-B) mRNA |
| J05287 | Trailer ATGCCT, Position 1600 Mouse lysosomal membrane glycoprotein (LAMP-2) mRNA |
| CTACAGCAGT count=5 | |
| D86725 | Trailer TCTGAG, Position 2747 Mouse mRNA for mMCM2 |
| AF004105 | Trailer TCTGAG, Position 2717 Mus musculus BM28 homolog mRNA |
| CTCACCGTGG count=5 | |
| U05809 | Trailer AGGACC, Position 1756 Mus musculus LAF1 transketolase mRNA |
| CTGAAACGAC count=5 | |
| U34883 | Trailer AGTGGT, Position 1477 Mus musculus ATP sulfurylase/APS kinase mRNA |
| CTGGGGTTTA count=5 | |
| U69270 | Trailer TACCTA, Position 2119 Mus musculus nuclear LIM interactor (NLI) mRNA |
| CTTAATATTT count=5 | |
| AF085348 | Trailer TGATTT, Position 1544 Mus musculus proline-rich protein (Bprp) mRNA |
| GAGAAGCCCT count=5 | |
| L13610 | Trailer CCGCCC, Position 700 Mus musculus IFN-response element binding factor 2 (IREBF2) mRNA |
| GCACTCGTGA count=5 | |
| AF176514 | Trailer GATTCT, Position 761 Mus musculus E2F1-inducible protein (Eig2) mRNA |
| GCATTGCGCA count=5 | |
| D49686 | Trailer GGGGAG, Position 1400 Mus musculus mRNA for Tat binding protein-1 |
| GCCTGGCAAT count=5 | |
| AB039837 | Trailer GCAGTA, Position 914 Mus musculus Cope1 mRNA for nonclathrin coat protein epsilon-COP |
| GTAGCAGGAG count=5 | |
| AF041476 | Trailer GAAACA, Position 1174 Mus musculus BAF53a (Baf53a) mRNA |
| TAAGCCAGAA count=5 | |
| M33215 | Trailer GGGGCG, Position 494 Mouse beta-galactoside-binding lectin (L-34) mRNA |
| J03723 | Trailer GGGGCG, Position 786 Mouse carbohydrate binding protein 35 mRNA |
| X16834 | Trailer GGGGCG, Position 832 Mouse mRNA for Mac-2 antigen. |
| TAATAAACCA count=5 | |
| AF188712 | Trailer AGTGGC, Position 1951 Mus musculus mitochondrial dicarboxylate carrier mRNA |
| AF125536 | Trailer ATTGGT, Position 1802 Mus musculus histone deacetylase-3 (Hdac3) mRNA |
| AF098295 | Trailer ATTGGT, Position 1795 Mus musculus histone deacetylase 3 (Hdac3) mRNA |
| AF074882 | Trailer ATTGGT, Position 1241 Mus musculus strain C57BL/6J histone deacetylase 3 (Hdac3) mRNA |
| AF074881 | Trailer ATTGGT, Position 1814 Mus musculus strain C3H histone deacetylase 3 (Hdac3) mRNA |
| TACAAAGTGA count=5 | |
| AJ223293 | Trailer GTGCCA, Position 4190 Mus musculus mRNA for kinesin-related mitotic motor protein. |
| TACACAGTGA count=5 | |
| AF010305 | Trailer GGAAAA, Position 2699 Mus musculus Stra13 mRNA |
| TACCACCCTA count=5 | |
| X97042 | Trailer ACATCG, Position 250 Mus musculus mRNA for UBcM4 protein. |
| AJ130961 | Trailer ACATCG, Position 239 Mus musculus mRNA for ubiquitin-conjugating enzyme. |
| TATCCAATGG count=5 | |
| U30839 | Trailer GAGGTC, Position 1084 Mus musculus voltage dependent anion channel 3 mRNA |
| TATTAAAGAA count=5 | |
| U31758 | Trailer ACAATT, Position 1885 Mus musculus transcriptional regulator RPD3 homolog mRNA |
| TATTTCTGAG count=5 | |
| AF003346 | Trailer TATGTG, Position 1012 Mus musculus ubiquitin-conjugating enzyme UbcM2 mRNA |
| TCCCCACCAC count=5 | |
| AF040945 | Trailer CCCAGG, Position 1767 Mus musculus cell fate specification homolog MAB21L1 (Mab21l1) |
| TCCGAGCATA count=5 | |
| AF087826 | Trailer TACTCC, Position 641 Mus musculus claudin-8 mRNA |
| TCCTCCTTAT count=5 | |
| AF176009 | Trailer TCCCCA, Position 803 Mus musculus domesticus mitochondrial carrier homolog 2 mRNA |
| TCGCTATAAT count=5 | |
| M63286 | Trailer AGTGAA, Position 1839 Mouse man 6-P receptor (46MPR) mRNA |
| X64068 | Trailer AGTGAA, Position 1934 M.musculus mRNA for cation-dependent mannose-6-phosphate receptor. |
| X64070 | Trailer AGTGAA, Position 9630 M.musculus gene for cation-dependent mannose-6-phosphate receptor. |
| TCTCAGGCCA count=5 | |
| AB006970 | Trailer TGGGTC, Position 1328 Mus musculus Gaa1 mRNA for GPI anchor attachment protein |
| AB002136 | Trailer TGGGTC, Position 1321 Mus musculus mRNA for glycosylphosphatidylinositol anchor |
| TCTGTGAGTT count=5 | |
| M86671 | Trailer TGAGGA, Position 1739 Mus musculus interleukin 12 p40 subunit |
| AF152842 | Trailer TGTGTG, Position 1432 Mus musculus strain BALB/c polymyositis scleroderma overlap |
| AF152841 | Trailer TGTGTG, Position 1383 Mus musculus strain BALB/c polymyositis scleroderma overlap |
| TCTTTTGTCA count=5 | |
| AB041599 | Trailer CATTAA, Position 990 Mus musculus brain cDNA |
| TGACATTTGA count=5 | |
| D87903 | Trailer CACGAA, Position 1223 Mouse mRNA for ARF6 |
| TGGACTGGTG count=5 | |
| D14883 | Trailer TTTCTT, Position 1522 Mouse mRNA for C33/R2/IA4 |
| TGGGATACAG count=5 | |
| X95403 | Trailer CAGGGC, Position 381 M.musculus mRNA for GTP-binding protein. |
| TGGGCTGGTG count=5 | |
| M84683 | Trailer AGCCAG, Position 1988 Mouse episialin (Muc1) mRNA |
| TGTACCTAAG count=5 | |
| D13543 | Trailer AATAAA, Position 5286 Mus musculus mRNA for DNA polymerase alpha catalytic subunit |
| D17384 | Trailer AATAAA, Position 5308 Mouse mRNA for DNA polymerase alpha catalytic subunit p180. |
| TGTCTCTCCC count=5 | |
| S70184 | Trailer AGATGG, Position 740 MHC I=H-2Kd homolog [alternatively spliced |
| M23900 | Trailer AGATTG, Position 8 Mus musculus PYS-2 mRNA |
| M23899 | Trailer AGATTG, Position 57 Mus musculus PYS-2 mRNA |
| M23896 | Trailer AGATTG, Position 169 Mus musculus PYS-2 mRNA |
| M23895 | Trailer AGATTG, Position 169 Mus musculus PYS-2 mRNA |
| M23894 | Trailer AGATTG, Position 169 Mus musculus PYS-2 mRNA |
| M23893 | Trailer AGATTG, Position 169 Mus musculus mRNA |
| M69073 | Trailer AGATTG, Position 1051 Mus musculus mRNA |
| M69072 | Trailer AGATTG, Position 1051 Mus musculus mRNA |
| M69071 | Trailer AGATTG, Position 1051 Mus musculus mRNA |
| AB041568 | Trailer TTTAAT, Position 1815 Mus musculus brain cDNA |
| L76092 | Trailer GGCCGC, Position 195 Mus musculus p19 ARF protein mRNA |
| U27315 | Trailer CCAGAC, Position 1064 Mus musculus adenine nucleotide translocase-1 (Ant1) mRNA |
| X74510 | Trailer CCAGAC, Position 1071 M.musculus ANC1 mRNA for adenine nucleotide carrier. |
| TTGGGGGCAC count=5 | |
| AB026808 | Trailer ACAGTG, Position 1185 Mus musculus mRNA for synaptotagmin XI |
| TTGTCCTGAT count=5 | |
| X75343 | Trailer TCCTGT, Position 1578 M.musculus (BALB/c) RFP mRNA. |
| TTGTGGATTC count=5 | |
| U76960 | Trailer GTTAGT, Position 838 Mus musculus domesticus CDC42 protein (CDC42) mRNA |
| U37720 | Trailer GTTAGT, Position 1950 Mus musculus CDC42 mRNA |
| TTTGTATCGA count=5 | |
| AF140599 | Trailer ATGTCA, Position 168 Mus musculus ring-box protein 1 (Rbx1) mRNA |
| AAAAAACATG count=4 | |
| AF060093 | Trailer AAGAGG, Position 762 Mus musculus proteasome subunit C9 (Psma4) mRNA |
| AAAAGAACAT count=4 | |
| AF217319 | Trailer CGAGGA, Position 1961 Mus musculus putative repair and recombination helicase RAD26L |
| AAACGTGGCT count=4 | |
| M61007 | Trailer GAGCGC, Position 1108 Mouse alpha-1-acid glycoprotein (AGP/EBP) mRNA |
| X62600 | Trailer GAGCGC, Position 1199 M.musculus mRNA for C/EBP beta. |
| AAATATGTGG count=4 | |
| U50631 | Trailer AGATTT, Position 1019 Mus musculus heat-responsive protein (HRP12) mRNA |
| AACAAATCTT count=4 | |
| U17259 | Trailer CCCTAG, Position 2096 Mus musculus p19 mRNA |
| AACAATAAAC count=4 | |
| M33863 | Trailer CACAGC, Position 1382 Mouse 2'-5' oligo A synthetase mRNA |
| X04958 | Trailer CACAGC, Position 1382 Mouse mRNA for 2-5A synthetase (2'-5') oligoadenylate synthetase. |
| AACAGTAGTT count=4 | |
| D83999 | Trailer GTCTTT, Position 1107 Mus musculus mRNA for the third largest RNA polymerase II subunit |
| AACCGGTCCA count=4 | |
| U21960 | Trailer TGGACA, Position 796 Mus musculus calcium modulating cyclophilin ligand (CAML) gene |
| AACTGCGACA count=4 | |
| U01135 | Trailer TCTAGG, Position 255 Mus musculus B6D2F1 clone 2A-1 mRNA. |
| AAGGAAGAGG count=4 | |
| AF062567 | Trailer AACCTG, Position 1479 Mus musculus transcription factor Sp3 mRNA |
| AAGTTTCACA count=4 | |
| AF244543 | Trailer TCCTTC, Position 1965 Mus musculus clone 1-17 unknown mRNA. |
| AATATTGCCT count=4 | |
| U90886 | Trailer TAATGA, Position 1203 Mus musculus arginase II mRNA |
| AF032466 | Trailer TAATGA, Position 1183 Mus musculus arginase II mRNA |
| AATGACAGAG count=4 | |
| AF159368 | Trailer TGAGGT, Position 517 Mus musculus TF-1 cell apoptosis related protein-15 (Tfar15) mRNA |
| AATGCTACTG count=4 | |
| U38940 | Trailer ACCCTT, Position 1721 Mus musculus asparagine synthetase mRNA |
| AATGGATTGT count=4 | |
| AB041664 | Trailer TTTTAA, Position 1434 Mus musculus brain cDNA |
| ACATAAAACA count=4 | |
| AF234625 | Trailer GATTTG, Position 1908 Mus musculus pre-B-cell colony-enhancing factor mRNA |
| ACCACCAGGA count=4 | |
| AF060092 | Trailer CGCTGA, Position 598 Mus musculus proteasome subunit C10-II (Psmb3) mRNA |
| ACCAGGAAAC count=4 | |
| AF002718 | Trailer TTTTAA, Position 462 Mus musculus ATPase inhibitor (IF1) mRNA |
| ACCCCACAGT count=4 | |
| AF015309 | Trailer GAGGCG, Position 1534 Mus musculus nucleolar protein (MSP58) mRNA |
| ACGGGAGAAG count=4 | |
| U27457 | Trailer TACAAG, Position 2503 Mus musculus origin recognition complex protein 2 homolog mORC2L |
| ACTACAACTA count=4 | |
| U89652 | Trailer TCATTT, Position 10209 Mus musculus breast cancer susceptibility (BRCA2) mRNA |
| U82270 | Trailer TCATTT, Position 10171 Mus musculus breast cancer susceptibility (Brca2) mRNA |
| U65594 | Trailer TCATTT, Position 10459 Mus musculus BRCA2 (Brca2) mRNA |
| ACTAGCTTCG count=4 | |
| J04134 | Trailer AGGAGG, Position 756 Mouse brain calmodulin-dependent phosphatase (calcineurin) |
| J05479 | Trailer AGGAGG, Position 1473 Mouse calcineurin catalytic subunit mRNA |
| ACTATACATT count=4 | |
| U25633 | Trailer TGTTCT, Position 2309 Mus musculus tumor-associated membrane protein (TMP) mRNA |
| ACTCTATTTT count=4 | |
| AF193810 | Trailer GTGTAG, Position 2034 Mus musculus Rh type C glycoprotein (Rhcg) mRNA |
| ACTTAAAATG count=4 | |
| U07159 | Trailer GAAAAA, Position 1518 Mus musculus medium-chain acyl-CoA dehydrogenase (Acadm) mRNA |
| AGAAATGCTA count=4 | |
| AF249870 | Trailer GAATAA, Position 806 Mus musculus p53 apoptosis-associated target (Perp) mRNA |
| AGAGGCGACC count=4 | |
| AF187731 | Trailer AGGTAC, Position 9687 Mus musculus LAB300 (Lab300) mRNA |
| AGAGGCTGTG count=4 | |
| AF093403 | Trailer ACTCAA, Position 1341 Mus musculus 2-amino-3-ketobutyrate-coenzyme A ligase (Kbl) mRNA |
| AGAGTCGCCC count=4 | |
| AF197136 | Trailer TCCCAT, Position 798 Mus musculus FN5 protein (Fn5) mRNA |
| AGATGTTTAT count=4 | |
| U65986 | Trailer CTCTCC, Position 1886 Mus musculus annexin XI (Anx11) mRNA |
| AGCAAACTTA count=4 | |
| AF179566 | Trailer AGACAT, Position 3044 Mus musculus p130Cas-binding protein AND34-1 (And34) mRNA |
| AGCCGCTCAA count=4 | |
| AF019662 | Trailer GATTCT, Position 669 Mus musculus C6-I proteasome chain mRNA |
| AGCTAAAGGC count=4 | |
| AF173297 | Trailer ACACTG, Position 276 Mus musculus e(y)2 homolog mRNA |
| AGCTGCTCAC count=4 | |
| AF093418 | Trailer GCTGAT, Position 1527 Mus musculus maleylacetoacetate isomerase mRNA |
| AGGCAGTTTC count=4 | |
| U44426 | Trailer TGTTCT, Position 1585 Mus musculus D52 (mD52) mRNA |
| AGGCCGGGGC count=4 | |
| D67067 | Trailer GGCAGG, Position 2099 Mouse mRNA for thymic epithelial cell surface antigen |
| AGGGGAGGCC count=4 | |
| AF017630 | Trailer GCAGAC, Position 1109 Mus musculus vascular actin single-stranded DNA-binding factor 2 |
| AGGTAAGAAG count=4 | |
| AF112186 | Trailer TCTTGA, Position 2343 Mus musculus epithelial sodium channel beta subunit mRNA |
| AGTCAGCCCG count=4 | |
| AF161074 | Trailer GGCCAG, Position 145 Mus musculus TF-1 apoptosis related protein 19 (Tfar19) mRNA |
| AGTCCTCTGC count=4 | |
| D87032 | Trailer ACACTT, Position 135 Mouse (EHM-2) mRNA |
| AB032366 | Trailer ACACTT, Position 3297 Mus musculus Ehm2 mRNA |
| AGTGCCTTTG count=4 | |
| X80638 | Trailer GCTACC, Position 490 M.musculus rhoC mRNA. |
| ATAAGTCTTA count=4 | |
| AB025405 | Trailer ACTTTT, Position 1063 Mus musculus mRNA for sid2895p |
| ATAGCTCTAG count=4 | |
| AB012693 | Trailer CAGAAC, Position 957 Mus musculus mRNA for CD47 |
| ATAGGCAAAC count=4 | |
| Y17223 | Trailer GTGGCA, Position 284 Mus musculus mRNA for F1F0-ATP synthase |
| ATAGTTATCC count=4 | |
| M17488 | Trailer GCTCAC, Position 334 Mouse Ig active kappa-chain V-region (180.2G6) mRNA (V8-J5) |
| M17487 | Trailer GCTCAC, Position 326 Mouse Ig active kappa-chain V-region (180.5G4) mRNA (V8-J5) |
| M17486 | Trailer GCTCAC, Position 334 Mouse Ig active kappa-chain V-region (180.6D10) mRNA (V8-J5) |
| M17485 | Trailer GCTCAC, Position 315 Mouse Ig active kappa-chain V-region (180.7C9) mRNA (V8-J5) |
| M17483 | Trailer GCTCAC, Position 332 Mouse Ig active kappa-chain V-region (198.4D9) mRNA (V8-J5) |
| M17482 | Trailer GCTCAC, Position 334 Mouse Ig active kappa-chain V-region (198.5C8) mRNA (V8-J5) |
| M17481 | Trailer GCTCAC, Position 332 Mouse Ig active kappa-chain V-region (198.3D3) mRNA (V8-J5) |
| M17480 | Trailer GCTCAC, Position 332 Mouse Ig active kappa-chain V-region (198.5C2) mRNA (V8-J5) |
| L48678 | Trailer GTACAC, Position 289 Mus musculus (cell line C3H/F2-6) chromosome 6 anti-DNA antibody |
| U55650 | Trailer TCCGCT, Position 289 Mus musculus anti-DNA immunoglobulin light chain IgG |
| AF157500 | Trailer CGACTC, Position 1399 Mus musculus acid ceramidase mRNA |
| ATGAAAAAGA count=4 | |
| M80263 | Trailer ATATGA, Position 1133 Mouse mRNA sequence. |
| M70642 | Trailer ATATGA, Position 1067 Mouse FISP-12 protein (fisp-12) mRNA |
| ATGAAGGTGG count=4 | |
| M18091 | Trailer TTTTCC, Position 28 Mouse U1b-2 small nuclear RNA (uRNA). |
| ATGGGGAATT count=4 | |
| AF164632 | Trailer ATTCCT, Position 2303 Mus musculus citrin (Slc25a13) mRNA |
| ATGTACAAGC count=4 | |
| X57024 | Trailer TGATGG, Position 1924 Murine GLUD mRNA for glutamate dehydrogenase. |
| CAAGAGGATG count=4 | |
| AF106853 | Trailer ATGTGC, Position 527 Mus musculus beta-B1 crystallin mRNA |
| CACCCACCTC count=4 | |
| U81823 | Trailer TGTTAC, Position 1287 Mus musculus p38delta MAP kinase mRNA |
| CACCGGCCCT count=4 | |
| AF095905 | Trailer GGCACC, Position 657 Mus musculus CPETR2 (Cpetr2) mRNA |
| AF087821 | Trailer GGCACC, Position 602 Mus musculus claudin-3 mRNA |
| AB000715 | Trailer GGCACC, Position 14 Mus musculus mRVP1 mRNA |
| CACTAGCTTC count=4 | |
| X06762 | Trailer TGCGTC, Position 3241 Mouse Hox2.3 mRNA. |
| CAGAAGCTGA count=4 | |
| U27830 | Trailer TGGATG, Position 1645 Mus musculus mSTI1 mRNA |
| CAGTGAGGAG count=4 | |
| AF156164 | Trailer CACCCG, Position 405 Mus musculus type I transmembrane protein Fn14 (Fn14) mRNA |
| CAGTTACTGG count=4 | |
| U89269 | Trailer GATAGA, Position 1308 Mus musculus preprodipeptidyl peptidase I mRNA |
| U74683 | Trailer GATAGA, Position 1307 Mus musculus dipeptidyl peptidase I precursor mRNA |
| CAGTTTTGGG count=4 | |
| U97170 | Trailer AAAGGA, Position 954 Mus musculus protein kinase inhibitor gamma (PKIg) mRNA |
| CCAAACTACT count=4 | |
| AF019385 | Trailer TGATAA, Position 1166 Mus musculus heparan sulfate D-glucosaminyl 3-O-sulfotransferase-1 |
| CCAGCACCGA count=4 | |
| J03928 | Trailer GGGGAA, Position 2445 Mouse CD1 phosphofructokinase (PFK) mRNA |
| CCAGTGGATG count=4 | |
| U19892 | Trailer AAGTGT, Position 2146 Mus musculus putative CCAAT binding factor 2 (mCBF) mRNA |
| U19891 | Trailer AAGTGT, Position 2432 Mus musculus putative CCAAT binding factor 1 (mCBF) mRNA |
| CCCACCAGCC count=4 | |
| AF106967 | Trailer ACCCCC, Position 216 Mus musculus I3 protein mRNA |
| CCCACCCCGT count=4 | |
| AF121344 | Trailer GGCACA, Position 3040 Mus musculus tetraspanin Tspan-5 (Tspan5) mRNA |
| CCTACTACGT count=4 | |
| D85414 | Trailer GCTGGA, Position 4736 Mus musculus mRNA |
| U96635 | Trailer GCTGGA, Position 4826 Mus musculus ubiquitin protein ligase Nedd-4 mRNA |
| CCTGGAGTGA count=4 | |
| X59047 | Trailer CCAGAG, Position 705 M.musculus MD3 mRNA. |
| CCTGTTCCCC count=4 | |
| AB012865 | Trailer TGAGAA, Position 619 Mus musculus mRNA for C184S protein |
| CCTTTTCCAT count=4 | |
| X81444 | Trailer TCTGGA, Position 80 M.musculus SIG-111 mRNA. |
| AF023483 | Trailer TCTGGA, Position 1061 Mus musculus HS-1-associating protein HAX-1L (mHAX-1s) pseudogene |
| AF023482 | Trailer TCTGGA, Position 898 Mus musculus HS1-associating protein (mHAX-1s) mRNA |
| CGCAAGGTGC count=4 | |
| X70764 | Trailer TGGACG, Position 2190 M.musculus mRNA for serine/threonine protein kinase. |
| CGCGAATGCT count=4 | |
| AF124786 | Trailer CGGAGG, Position 181 Mus musculus NADH-ubiquinone oxidoreductase B8 subunit (Ndufa2) |
| CGCTCACGCC count=4 | |
| U78539 | Trailer CAGCAG, Position 2635 Mus musculus hereditary multiple exostoses (Ext1) mRNA |
| CGGGTGTCCA count=4 | |
| AF060091 | Trailer GTGACA, Position 733 Mus musculus proteasome subunit X (Psmb5) mRNA |
| AB003304 | Trailer GTGACA, Position 736 Mus musculus mRNA for PSMB5 |
| CTCTCTGGAA count=4 | |
| AF064806 | Trailer GAGACT, Position 2870 Mus musculus vinexin alpha mRNA |
| CTGAAGAAAT count=4 | |
| X90875 | Trailer CATATG, Position 1927 M.musculus mRNA for FXR1 protein. |
| AF124385 | Trailer CATATG, Position 1541 Mus musculus fragile-X-related protein 1 (Fxr1h) mRNA |
| CTGGTTCCCC count=4 | |
| AF079971 | Trailer ATTTGG, Position 1449 Mus musculus cytohesin-2 mRNA |
| CTGTGATGAC count=4 | |
| AB008895 | Trailer AATAAA, Position 3027 Mus musculus mRNA for mGpi1p |
| CTTCCTATGC count=4 | |
| U25708 | Trailer AGAACC, Position 1707 Mus musculus CD98 heavy chain mRNA |
| X14309 | Trailer AGAACC, Position 1672 Murine mRNA for 4F2 antigen heavy chain. |
| AB023408 | Trailer AGAACC, Position 1685 Mus musculus mRNA for 4F2 heavy chain |
| CTTGGTTTTG count=4 | |
| U40750 | Trailer AGAAAT, Position 3838 Mus musculus formin binding protein 30 mRNA |
| CTTTCTTAAG count=4 | |
| D78641 | Trailer ATGCTG, Position 3938 Mouse mRNA for membrane glycoprotein |
| D78503 | Trailer ATGCTG, Position 991 Mus musculus seizure-related mRNA |
| GAAGCCTGTG count=4 | |
| Y08948 | Trailer TGTAAA, Position 747 Mus musculus mRNA; contains SIG41 antisense sequences. |
| GCCTGGCGTG count=4 | |
| M31042 | Trailer GACCAC, Position 1308 Mus musculus T-lymphocyte activated protein mRNA. |
| M59821 | Trailer GACCAC, Position 1311 Mouse growth factor-inducible protein (pip92) mRNA |
| GGAATGTGGT count=4 | |
| Z67746 | Trailer CACCAT, Position 757 M.musculus mRNA for phosphatase 2A catalytic subunit |
| GTTAACTATG count=4 | |
| Z38117 | Trailer AGCTAG, Position 2845 M.musculus mRNA for dead-box RNA helicase. |
| TAATGGTCCT count=4 | |
| U80819 | Trailer AACAGT, Position 983 Mus musculus glutathione-S-transferase homolog mRNA |
| TACATTGGGT count=4 | |
| D78643 | Trailer GTGGGG, Position 1419 Mouse seizure-related mRNA |
| TACTTAAAAA count=4 | |
| X62940 | Trailer CTGCTT, Position 1399 M.musculus TSC-22 mRNA. |
| TAGCTCAGAG count=4 | |
| U43508 | Trailer ACTGGT, Position 2000 Mus musculus RORgamma orphan nuclear receptor mRNA |
| U39071 | Trailer ACTGGT, Position 2038 Mus musculus orphan receptor TOR mRNA |
| AJ132394 | Trailer ACTGGT, Position 2066 Mus musculus mRNA for ROR gamma T protein. |
| TAGTTTGTTT count=4 | |
| X78304 | Trailer GGTGTA, Position 226 M. musculus (SRP9) signal recognition particle subunit mRNA |
| TATATATGTG count=4 | |
| AF079974 | Trailer AACATT, Position 2716 Mus musculus Rac GTPase-activating protein mRNA |
| AB030252 | Trailer AACATT, Position 2758 Mus musculus MgcRacGAP mRNA for GTPase activating protein |
| TATGAGTGAT count=4 | |
| M35970 | Trailer AGGACG, Position 489 Mouse tumor metastatic process-associated protein (NM23) gene mRNA |
| U85511 | Trailer AGGACG, Position 539 Mus musculus nucleoside diphosphate kinase A long form mRNA |
| AF033377 | Trailer AGGACG, Position 487 Mus musculus nucleoside diphosphate kinase A (NDPK-A) long form |
| TATGTGGCAT count=4 | |
| U07631 | Trailer TTTAAA, Position 1839 Mus musculus B6/CBA beta-hexosaminidase (Hexa) mRNA |
| X64331 | Trailer TTTCTC, Position 1790 M.musculus Hexa mRNA for beta-N-acetylhexosaminidase. |
| TATTGAGCCC count=4 | |
| D87909 | Trailer CCTCTC, Position 822 Mus musculus mRNA for PA28 alpha subunit |
| TCACAGCCAG count=4 | |
| X59728 | Trailer TTCTGT, Position 72 M.musculus mRNA for gas5 growth arrest specific protein. |
| TCACATTTTG count=4 | |
| U62545 | Trailer AGAAAC, Position 282 Mus musculus FK506-binding protein 25 homolog (mFKBP25) mRNA |
| AF135595 | Trailer AGAAAC, Position 803 Mus musculus 25 kDa FK506 binding protein FKBP25 (Fkbp25) mRNA |
| AF110812 | Trailer AGAAAC, Position 796 Mus musculus 25 kDa FK506-binding protein (Fkbp25) mRNA |
| TCACTCTCAG count=4 | |
| M35725 | Trailer GAGAGC, Position 316 Mouse Cu-Zn superoxide dismutase mRNA |
| X06683 | Trailer GAGAGC, Position 316 Mouse mRNA for Cu-Zn superoxide dismutase (EC 1.15.1.1). |
| TCCATTTGGG count=4 | |
| M74227 | Trailer TGACCC, Position 1114 Mouse cyclophilin C (cyp C) mRNA |
| TCCTCACACT count=4 | |
| AF131206 | Trailer AGAGTG, Position 909 Mus musculus 101F6 protein mRNA |
| TCTGTCCGAA count=4 | |
| M23568 | Trailer CTGTGA, Position 1076 Mus musculus (clone pFT27) transmembrane protein mRNA |
| TCTTATACCC count=4 | |
| U07890 | Trailer AAAAAA, Position 2556 Mus musculus C57BL/6J epidermal surface antigen (mesa) mRNA |
| TCTTTTCCTG count=4 | |
| AF159853 | Trailer ACCCTC, Position 3475 Mus musculus damage-specific DNA binding protein 1 (DDB1) mRNA |
| AB026432 | Trailer ACCCTC, Position 3515 Mus musculus mRNA for XPE UV-damaged DNA binding factor |
| TGAAAAAAAA count=4 | |
| AB041616 | Trailer AAAAAA, Position 2420 Mus musculus brain cDNA |
| TGAAGAGGAA count=4 | |
| U70674 | Trailer TCTGTA, Position 2231 Mus musculus m-Numb (m-nb) mRNA |
| TGAAGAGGGG count=4 | |
| U01139 | Trailer TGAGCT, Position 1163 Mus musculus B6D2F1 clone 2C11B mRNA. |
| TGAGGCCTTG count=4 | |
| Z47088 | Trailer TTTTTT, Position 1051 M.musculus mRNA for RNA polymerase II elongation factor-like |
| TGAGGGTGTA count=4 | |
| U10119 | Trailer TGTCAC, Position 2561 Mus musculus SKD1 protein mRNA |
| TGATTGCCTT count=4 | |
| U75840 | Trailer CATGGA, Position 1087 Mus musculus interferon regulatory factor 3 (mirf3) mRNA |
| U75839 | Trailer CATGGA, Position 1204 Mus musculus interferon regulatory factor 3 (mirf3) mRNA |
| TGCACTCGGT count=4 | |
| D86370 | Trailer ACCCTC, Position 1456 mouse mRNA for megakaryocyte potentiating factor |
| TGCGATGAAC count=4 | |
| AB009392 | Trailer TGGGAG, Position 388 Mus musculus mRNA for protein L |
| TGCTCTGTTT count=4 | |
| M94450 | Trailer TATACC, Position 2370 Mus musculus epidermal growth factor receptor-binding protein GRB7 |
| TGGAGACTGA count=4 | |
| U79774 | Trailer GTCCAG, Position 1786 Mus musculus NNP-1 var (NNP-1) mRNA |
| U79773 | Trailer GTCCAG, Position 1633 Mus musculus NNP-1 (NNP-1) mRNA |
| TGGATTGTGG count=4 | |
| U35249 | Trailer AGCCAA, Position 1104 Mus musculus CDK-activating kinase assembly factor p36/MAT1 |
| TGGATTTAAT count=4 | |
| D87902 | Trailer TTGGTT, Position 858 Mouse mRNA for ARF5 |
| TGGGCCTGAA count=4 | |
| U60001 | Trailer GCGCGG, Position 281 Mus musculus protein kinase C inhibitor (mPKCI) mRNA |
| TGGGGGCCCC count=4 | |
| AB026497 | Trailer AAGGCA, Position 7160 Mus musculus MysPDZ mRNA for myosin containing PDZ domain |
| TGTAATCATA count=4 | |
| AF041054 | Trailer ATCCAG, Position 985 Mus musculus E1B 19K/Bcl-2-binding protein homolog (Nip3) mRNA |
| TGTGCGGTCT count=4 | |
| M18934 | Trailer TGCAAG, Position 461 Mouse T lymphocyte-like antigen CD2 mRNA |
| TTAAATAAAA count=4 | |
| AB025049 | Trailer CTTGTT, Position 1587 Mus musculus mRNA for Sid393p |
| TTACTATATA count=4 | |
| L10244 | Trailer AGAAAA, Position 836 Mouse spermidine/spermine N1-acetyltransferase (SSAT) mRNA |
| TTCACACAGC count=4 | |
| M58761 | Trailer ATTATG, Position 1278 Mouse Sm-B protein gene |
| TTCTCTATGA count=4 | |
| D78355 | Trailer AAACAT, Position 1191 Mus musculus TRA1 mRNA |
| D78354 | Trailer AAACAT, Position 982 Mus musculus TRA1 mRNA |
| AF159593 | Trailer AAACAT, Position 1388 Mus musculus phospholipid scramblase 1 mRNA |
| TTGATGCGGG count=4 | |
| AF294617 | Trailer TGGAAC, Position 4022 Mus musculus inducible 6-phosphofructo-2-kinase mRNA |
| TTGGAGGAGA count=4 | |
| AF022223 | Trailer TTGACA, Position 924 Mus musculus Bcl-2-binding protein (BAG-1) mRNA |
| TTGGGGGAGA count=4 | |
| AF079527 | Trailer GAGGGA, Position 1553 Mus musculus IER5 (Ier5) mRNA |
| TTTGCTTGTG count=4 | |
| M34141 | Trailer GCAGCT, Position 2713 Mouse prostaglandin endoperoxide (PGG/H) mRNA |
| TTTTGTGTTT count=4 | |
| AF175968 | Trailer TTCTCC, Position 3831 Mus musculus Leman coiled-coil protein variant 2 (Lccp) mRNA |
| AF175967 | Trailer TTCTCC, Position 2974 Mus musculus Leman coiled-coil protein variant 1 (Lccp) mRNA |
| TTTTTACAGT count=4 | |
| X89650 | Trailer ATCCAT, Position 1303 M.musculus mRNA for Rab7 protein. |
| AAAGCACGCC count=3 | |
| AF159571 | Trailer TGCATG, Position 1247 Mus musculus growth/differentiation factor-15 (Gdf15) mRNA |
| AAAGCTGGAC count=3 | |
| L13103 | Trailer TGAAAA, Position 2993 Mus musculus MEK kinase mRNA |
| AF117340 | Trailer TGAAAA, Position 4984 Mus musculus MAP kinase kinase kinase 1 (Mekk1) mRNA |
| AAATAAAGTT count=3 | |
| X51905 | Trailer AGCAAT, Position 1211 Mouse Ldh-2 mRNA for lactate dehydrogenase-B (EC 1.1.1.27). |
| AAATAGCACA count=3 | |
| X75285 | Trailer GAAAGG, Position 4355 M.musculus mRNA for fibulin-2. |
| AAATGAAATG count=3 | |
| U89795 | Trailer CCTCAC, Position 1784 Mus musculus protein kinase mRNA |
| AF002823 | Trailer CCTCAC, Position 1712 Mus musculus mitotic checkpoint protein kinase (Bub1) mRNA |
| AACAAGCAGA count=3 | |
| U95736 | Trailer CCCCAA, Position 444 Mus musculus frataxin mRNA |
| AF223569 | Trailer CCGCAA, Position 316 Mus musculus frataxin pseudogene |
| AACACTTACG count=3 | |
| AB008553 | Trailer TTAGGA, Position 1357 Mus musculus mRNA for mLGP85/LIMP II |
| AACCGCATCG count=3 | |
| U76832 | Trailer AGAAGA, Position 711 Mus musculus plasma membrane protein syntaxin-4 mRNA |
| AACCTGAGCG count=3 | |
| AB012580 | Trailer TGGAGA, Position 1530 Mus musculus mRNA for eIF3 p66 |
| AAGAATAAGA count=3 | |
| M29462 | Trailer CCTGGA, Position 954 Mouse malate dehydrogenase mRNA |
| AAGAATGGAC count=3 | |
| U21549 | Trailer CAAGAT, Position 1235 Mus musculus Ac39/physophilin mRNA |
| U13840 | Trailer CAAGAA, Position 1252 Mus musculus vacuolar adenosine triphosphatase subunit D mRNA |
| AAGCAGCGAG count=3 | |
| Z14049 | Trailer AGGCTG, Position 759 M.musculus mRNA for 3 |
| AAGGGGGAAA count=3 | |
| AF014452 | Trailer GGCCCC, Position 55 Mus musculus murine retrovirus readthrough RNA sequence. |
| AAGGGTGTCA count=3 | |
| U17332 | Trailer CGCTGG, Position 203 Mus musculus ribosomal protein L9 (musl9) mRNA |
| U17331 | Trailer CGCTGG, Position 203 Mus musculus mutant ribosomal protein L9 (musl9mu) mRNA |
| AATGACCATC count=3 | |
| L16953 | Trailer ATTTTC, Position 1684 Mouse tumor cell dnaJ-like protein 1 mRNA |
| AATGCAATGA count=3 | |
| AF071315 | Trailer CGTGGG, Position 880 Mus musculus COP9 complex subunit 6 (COPS6) mRNA |
| AATGGCTTTG count=3 | |
| M35248 | Trailer ATGCAG, Position 1561 Mouse MHC class I H2-TL-T9-c mRNA (d haplotype) |
| M35247 | Trailer ATGCAG, Position 1642 Mouse MHC class I H2-TL-T17-c mRNA (d haplotype) |
| M35244 | Trailer ATGCAG, Position 1643 Mouse MHC class I H2-TL-T10-129 mRNA (b haplotype) |
| M35246 | Trailer ATGCAG, Position 1567 Mouse MHC class I H2-TL-T10-b mRNA (b haplotype) |
| M35245 | Trailer ATGCAG, Position 1680 Mouse MHC class I H2-TL-27-b mRNA (b haplotype) |
| M35243 | Trailer ATGCAG, Position 1649 Mouse MHC class I H2-TL-27-129 mRNA (b haplotype) |
| ACAAAAGAGG count=3 | |
| AB031387 | Trailer CTGTTG, Position 907 Mus musculus mRNA for Clast3 protein |
| ACAAATAAAT count=3 | |
| U01137 | Trailer GGTGCT, Position 938 Mus musculus B6D2F1 clone 2C#4 mRNA. |
| ACAACTGATT count=3 | |
| U43084 | Trailer CCTGCT, Position 1688 Mus musculus glucocorticoid-attenuated response gene 16 (GARG-16) |
| ACAATACAAC count=3 | |
| AF149013 | Trailer TTTATG, Position 6747 Mus musculus transient receptor potential-related protein (ChaK) |
| ACACAAGTGT count=3 | |
| U17698 | Trailer GGGTTT, Position 2471 Mus musculus ablphilin-1 (abi-1) mRNA |
| ACAGCAGAGA count=3 | |
| Y15128 | Trailer TGGCCA, Position 2174 Mus musculus mRNA for novel leucine zipper protein |
| AF141294 | Trailer TGGCCA, Position 3694 Mus musculus bamacan (Bam) mRNA |
| AF047601 | Trailer TGGCCA, Position 3671 Mus musculus SMCD (SmcD) mRNA |
| ACAGTACAAT count=3 | |
| AF100198 | Trailer AGCTCA, Position 1664 Mus musculus putative NAD(P)H steroid dehydrogenase mRNA |
| ACAGTATTGT count=3 | |
| M28739 | Trailer CTCAGA, Position 442 Mouse beta-tubulin gene M-beta-2 |
| ACAGTGCGTG count=3 | |
| AF076156 | Trailer CCTGGC, Position 1181 Mus musculus catechol-O-methyltransferase (Comt) mRNA |
| ACATGGCTGG count=3 | |
| L11564 | Trailer ATGTGA, Position 534 Mus musculus syndecan-1 (synd-1) mRNA |
| ACCCAGCCTT count=3 | |
| L02210 | Trailer AGCAGT, Position 1990 Mus musculus tyrosine kinase-related protein mRNA |
| M98547 | Trailer AGCAGT, Position 1979 Mouse growth factor receptor (RYK) mRNA |
| L21707 | Trailer AGCAGT, Position 2024 Mus musculus receptor tyrosine kinase (MRK) mRNA |
| ACGTGACCAC count=3 | |
| AB041925 | Trailer CCTTTC, Position 4264 Mus musculus mRNA for GCK family kinase MINK2 |
| AB035697 | Trailer CCTTTC, Position 4239 Mus musculus mRNA for Misshapen/NIKs-related kinase MINK-1 |
| ACGTGTATGT count=3 | |
| AF143947 | Trailer GTCGTG, Position 265 Mus musculus GAP SH3-binding protein (G3BP) mRNA |
| AB001927 | Trailer GTCGTG, Position 2342 Mus musculus mRNA for ras-GTPase-activating protein SH3-domain |
| ACTCTGGCCG count=3 | |
| AF119149 | Trailer CTCTTC, Position 325 Mus musculus strain B6D2 F1/J filamin mRNA |
| ACTGATGTCA count=3 | |
| D78642 | Trailer TTGCAA, Position 2067 Mouse mRNA for CAAT-box binding protein NF-YA |
| ACTGGGTGTG count=3 | |
| X64837 | Trailer TTTCAG, Position 2065 M.musculus Oat mRNA for ornithine aminotransferase. |
| AGAACTGGAC count=3 | |
| U91513 | Trailer AGCTCC, Position 682 Mus musculus adhesion molecule ninjurin mRNA |
| AGAAGGAAGA count=3 | |
| L06896 | Trailer GAAACA, Position 2103 Mouse mRNA sequence. |
| D11089 | Trailer GAAACA, Position 2106 Mus musculus mRNA for p66 mot1 |
| AGACTGGTGA count=3 | |
| AF266284 | Trailer GAAAGC, Position 3931 Mus musculus ABC transporter mRNA |
| AGCACCGTGG count=3 | |
| M29264 | Trailer TGAGCT, Position 205 Mouse signal recognition particle subunit (SRP14) mRNA |
| AGCAGAGTGG count=3 | |
| L31515 | Trailer ACGCTG, Position 237 Mus musculus anticryptococcal Ig 21D2 L-chain mRNA V region |
| M22426 | Trailer AGGCTG, Position 120 Mouse Ig rearranged kappa-chain mRNA from hybridoma (CBA/N x |
| M19770 | Trailer AGNNNG, Position 209 Mouse Ig active kappa chain mRNA V-region mAb E |
| M13600 | Trailer AGGCTG, Position 120 Mouse Ig active kappa-chain VJ2 mRNA from HP-GAT. |
| K00713 | Trailer AGGCTG, Position 114 Mouse Ig kappa active CGAT+ anti-GAT partial mRNA from hybridoma G6 |
| K00712 | Trailer AGGCTG, Position 119 Mouse Ig kappa active CGAT+ anti-GAT partial mRNA from hybridoma G7 |
| K00711 | Trailer AGGCTG, Position 95 Mouse Ig kappa active CGAT+ anti-GAT partial mRNA from hybridoma G5 |
| K00710 | Trailer AGGCTG, Position 120 Mouse Ig kappa active CGAT+ anti-GAT partial mRNA from hybridoma G8 |
| X66634 | Trailer AGGCTG, Position 334 M.musculus rearranged V(k)45.1 mRNA for immunoglobulin kappa light |
| U41438 | Trailer AGGCTG, Position 237 Mus musculus monoclonal antibody FG1 to cardiolipin |
| U83628 | Trailer AGCTGG, Position 434 Mus musculus defender against cell death 1 protein (DAD1) mRNA |
| D88315 | Trailer AATTCA, Position 2113 Mouse mRNA for tetracycline transporter-like protein |
| AF281634 | Trailer TCATTT, Position 2243 Mus musculus Kruppel-type zinc finger protein KROX-25 mRNA |
| AGCGTGTAGC count=3 | |
| AF042491 | Trailer CATGCT, Position 983 Mus musculus putative membrane associated progesterone receptor |
| AGGCCAAACA count=3 | |
| M93275 | Trailer CTTGGG, Position 1093 Mouse adipose differentiation related protein (ADFP) mRNA |
| AGTGGCTGTT count=3 | |
| U30838 | Trailer TTAAGA, Position 1364 Mus musculus voltage dependent anion channel 2 mRNA |
| AGTGTCAGGG count=3 | |
| AF003115 | Trailer GTGTCA, Position 1820 Mus musculus JIP-1 (JIP-1) mRNA |
| AF109771 | Trailer GTGTCA, Position 1825 Mus musculus JIP-3 mRNA |
| AF109770 | Trailer GTGTCA, Position 1979 Mus musculus JIP-2b mRNA |
| AF109769 | Trailer GTGTCA, Position 1924 Mus musculus JIP-2a mRNA |
| AF109768 | Trailer GTGTCA, Position 1861 Mus musculus JIP-1b mRNA |
| AF054611 | Trailer GTGTCA, Position 1961 Mus musculus JNK interacting protein-1b (JIP-1b) mRNA |
| AGTTACTTTA count=3 | |
| AF022811 | Trailer AAAAAT, Position 623 Mus musculus cornichon mRNA |
| AGTTATTAAA count=3 | |
| AF169633 | Trailer TAATGT, Position 2518 Mus musculus alpha 2 delta calcium channel subunit mRNA |
| AGTTCTTTTA count=3 | |
| U24674 | Trailer AACAAA, Position 1194 Mus musculus Max interacting protein 1 alternatively spliced long |
| AGTTTGTTTT count=3 | |
| AF242857 | Trailer TCAAGT, Position 1571 Mus musculus clathrin adaptor protein mu3A mRNA |
| ATAAATAAAT count=3 | |
| AB041585 | Trailer GTTTCT, Position 2096 Mus musculus brain cDNA |
| ATCATGTTGC count=3 | |
| U81829 | Trailer CATCCT, Position 2310 Mus musculus calumenin mRNA |
| ATCATTCGTG count=3 | |
| D85818 | Trailer TGCAGA, Position 226 Mouse mRNA for RNA polymerase II subuunit RPB14 |
| ATCATTGAGG count=3 | |
| U54984 | Trailer TGGATG, Position 1818 Mus musculus membrane-type matrix metalloproteinase 1 mRNA |
| X83536 | Trailer TGGATG, Position 1744 Mus musculus mRNA for membrane-type matrix metalloproteinase. |
| ATCCAAGCTG count=3 | |
| AF020200 | Trailer TTGTAA, Position 2369 Mus musculus transcription factor PBX3b (PBX3b) mRNA |
| ATGATGGAGA count=3 | |
| AB025407 | Trailer AGGTGA, Position 408 Mus musculus mRNA for sid2057p |
| ATGCAGAAGA count=3 | |
| M25825 | Trailer ACGGTG, Position 216 Mouse tctex-1 mRNA |
| ATGCAGCAGA count=3 | |
| AF073297 | Trailer AGCAGA, Position 144 Mus musculus small EDRK-rich factor 2 (Serf2) mRNA |
| ATGCTAGCTA count=3 | |
| AF153197 | Trailer TGTTCT, Position 1581 Mus musculus lipotransin mRNA |
| ATGTACAGAG count=3 | |
| AB041580 | Trailer GTCTTT, Position 1925 Mus musculus brain cDNA |
| ATTAAAACTA count=3 | |
| X81323 | Trailer TATGTA, Position 3990 M.musculus mRNA for tripeptidyl peptidase II. |
| ATTAAGAAAG count=3 | |
| U30292 | Trailer AAAGAA, Position 2795 Mus musculus collagen type XIII alpha-1 chain mRNA |
| ATTCAGACAG count=3 | |
| AF098967 | Trailer TACATT, Position 3406 Mus musculus interleukin enhancer binding factor 3 (Ilf3) mRNA |
| ATTGAGACAC count=3 | |
| Y17393 | Trailer TGTCAC, Position 300 Mus musculus mRNA for prefoldin subunit 2. |
| ATTGTGACCT count=3 | |
| AF006688 | Trailer ATTAAG, Position 3477 Mus musculus peroxisomal acyl-CoA oxidase (muspaox) mRNA |
| ATTTGGTGCT count=3 | |
| AF240783 | Trailer AAAACA, Position 2628 Mus musculus ELKL motif kinase 2 short form (EMK2) mRNA |
| AF240782 | Trailer AAAACA, Position 2673 Mus musculus ELKL motif kinase 2 long form (EMK2) mRNA |
| CAAAAGGTTA count=3 | |
| AB029930 | Trailer CTGAAA, Position 2423 Mus musculus mRNA for caveolin-1 beta isoform |
| AB029929 | Trailer CTGAAA, Position 2375 Mus musculus mRNA for caveolin-1 alfa isoform |
| CAAAGGCAAA count=3 | |
| U11822 | Trailer TAATGG, Position 1147 Mus musculus MO15-associated kinase (MO15) mRNA |
| X74145 | Trailer TAATGG, Position 1166 M.musculus mRNA for protein kinase crk4. |
| CAAATATTGT count=3 | |
| M73329 | Trailer CATAGC, Position 1352 Mouse phospholipase C-alpha (PLC-alpha) mRNA |
| CAAGACCAGG count=3 | |
| L22472 | Trailer GTGGCT, Position 453 Mouse Bax alpha mRNA |
| CAAGCCCGGG count=3 | |
| AF221507 | Trailer GCCCGG, Position 2140 Mus musculus Lutheran glycoprotein (Lu) mRNA |
| AB035511 | Trailer GCCCGG, Position 2151 Mus musculus LU mRNA for Lutheran antigen |
| CAAGCTGTCA count=3 | |
| AB030504 | Trailer CAGGGA, Position 352 Mus musculus mRNA for UBE-1b |
| AB030503 | Trailer CAGGGA, Position 604 Mus musculus mRNA for UBE-1a |
| CAAGTCATGA count=3 | |
| J02583 | Trailer TTTGAA, Position 1168 Mouse cysteine proteinase mRNA |
| X06086 | Trailer TTTGAA, Position 1177 Mouse mRNA for major excreted protein (MEP). |
| AF121839 | Trailer TTTGAA, Position 1155 Mus musculus cell-line LXB2 cathepsin L mRNA |
| AF121838 | Trailer TTTGAA, Position 1155 Mus musculus cell-line LXA1 cathepsin L mRNA |
| AF121837 | Trailer TTTGAA, Position 1155 Mus musculus cell-line L929 cathepsin L mRNA |
| CAATAAAAGA count=3 | |
| J04694 | Trailer TGAATT, Position 5401 Mus musculus alpha-1 type IV collagen (Col4a-1) mRNA |
| X92439 | Trailer TGAATT, Position 262 M.musculus mRNA for alpha1(IV) chain of collagen type IV. |
| X02201 | Trailer TGAATT, Position 1444 Mouse mRNA fragment for basement membrane collagen alpha1(IV) |
| CACACTGTTA count=3 | |
| Z37110 | Trailer AAACAT, Position 3119 M.musculus mRNA for cyclin G. |
| CACAGCGATA count=3 | |
| U24173 | Trailer TCCAGA, Position 53 Mus musculus p21 (WAF1) mRNA |
| CACAGGAGGG count=3 | |
| AB033168 | Trailer TTCCAA, Position 4531 Mus musculus mRNA for nuclear protein ZAP |
| CACAGTCATG count=3 | |
| D16141 | Trailer AAAGGG, Position 3422 Mouse mgl-1 mRNA for ORF |
| CACCGAAGGA count=3 | |
| AF102817 | Trailer CATTAG, Position 798 Mus musculus nuclear LIM-only 4 protein (Lmo4) mRNA |
| CAGAAAGAAA count=3 | |
| Y12725 | Trailer ATGAAT, Position 2238 Mus musculus mRNA for pheromone receptor 1. |
| CAGAGCAAAC count=3 | |
| AF207748 | Trailer ACTGGA, Position 3132 Mus musculus histone deacetylase 5 (HDAC5) mRNA |
| AF006602 | Trailer ACTGGA, Position 3213 Mus musculus histone deacetylase mHDA1 mRNA |
| CAGAGGCCAC count=3 | |
| M74516 | Trailer AGCAAG, Position 1544 Mouse GA binding protein (GABP-beta1 subunit) mRNA |
| CAGATGACCG count=3 | |
| Z67745 | Trailer TGGTGG, Position 604 M.musculus mRNA for phosphatase 2A catalytic subunit |
| AF076192 | Trailer TGGTGG, Position 799 Mus musculus protein phosphatase type 2A catalytic subunit alpha |
| CAGCAAGTCA count=3 | |
| U62297 | Trailer CCATGC, Position 900 Mus musculus transcription factor NF-YC subunit mRNA |
| AB006181 | Trailer CCATGC, Position 900 Mus musculus mRNA for nuclear factor YC |
| CAGCTCACCA count=3 | |
| AB041579 | Trailer GGGACT, Position 1680 Mus musculus brain cDNA |
| CAGCTGGACA count=3 | |
| AF077302 | Trailer AGCTCA, Position 768 Mus musculus Bcl-2-interacting protein beclin mRNA |
| CATCAGGTAT count=3 | |
| AF176814 | Trailer GTTGAA, Position 1682 Mus musculus Abl-philin 2 mRNA |
| CATCCAAAAA count=3 | |
| AF020185 | Trailer CAAGGA, Position 397 Mus musculus protein inhibitor of nitric oxide synthase (PIN) mRNA |
| CCAACACAGC count=3 | |
| AJ272019 | Trailer GATATG, Position 417 Mus musculus mRNA for 20S proteasome subunit C2 (Psma1 gene). |
| AF060088 | Trailer GATATG, Position 388 Mus musculus proteasome subunit C2 (Psma1) mRNA |
| CCACAATTAA count=3 | |
| X13135 | Trailer ACTGCA, Position 3261 Murine mRNA fragment for fatty acid synthase (EC 2.3.1.85). |
| AF127033 | Trailer ACTGCA, Position 8309 Mus musculus fatty acid synthase mRNA |
| CCACTGCTCA count=3 | |
| AF004107 | Trailer TTTGAC, Position 942 Mus musculus unknown protein mRNA |
| CCAGATAGCT count=3 | |
| AJ010483 | Trailer TGAAAA, Position 1125 Mus musculus mRNA for CtBP1 protein. |
| AB033122 | Trailer TGAAAA, Position 1177 Mus musculus CtBP1 mRNA for C-terminal binding protein 1 |
| CCAGGAAGGA count=3 | |
| X73230 | Trailer CCATCA, Position 2770 M.musculus mRNA for arylsulfatase A. |
| CCATATCCCT count=3 | |
| AB037370 | Trailer GTGAAA, Position 1492 Mus musculus Copz1 mRNA for nonclathrin coat protein zeta-COP |
| CCATGTGTCT count=3 | |
| AJ006469 | Trailer CCCCCA, Position 1536 Mus musculus mRNA for cartilage-associated protein (CASP). |
| CCATTTACTA count=3 | |
| Y13071 | Trailer TTTGAA, Position 1380 Mus musculus mRNA for 26S proteasome non-ATPase subunit. |
| CCCTCGGACC count=3 | |
| AB041655 | Trailer CCCTTG, Position 1763 Mus musculus brain cDNA |
| CCCTGGTCTC count=3 | |
| AF286163 | Trailer TCCCGT, Position 643 Mus musculus Phosphoinositol 4-phosphate Adaptor Protein-1 mRNA |
| CCCTTCTACC count=3 | |
| X13460 | Trailer TACTCC, Position 2298 Mouse mRNA for p68 protein of the lipocortin family. |
| CCGCCCGTCA count=3 | |
| AF052621 | Trailer GCTCTT, Position 940 Mus musculus hypothetical protein COX4AL (COX4AL) mRNA |
| CCTAAGGGTA count=3 | |
| U73902 | Trailer TTGGTT, Position 887 Mus musculus emerin (Sta) mRNA |
| CCTCCTTGTG count=3 | |
| AB024713 | Trailer AGCAGC, Position 929 Mus musculus mRNA for Supl15h |
| CCTCTGTACA count=3 | |
| AF155373 | Trailer GCATCC, Position 2998 Mus musculus nuclear factor kappa B subunit p100 (Nfkb2) mRNA |
| AF155372 | Trailer GCATCC, Position 2961 Mus musculus nuclear factor kappa B subunit p100 (Nfkb2) mRNA |
| CCTGGAGGCT count=3 | |
| D01093 | Trailer GGAGAG, Position 2201 Mus musculus mRNA for PC4 |
| CCTGGGACCC count=3 | |
| M27763 | Trailer TACTAC, Position 95 Mouse Ig rearranged H-chain mRNA V-region ((V-D-J2)) from hybridoma |
| CCTGGTTGCA count=3 | |
| AF289484 | Trailer TCTTCG, Position 1029 Mus musculus MYG1 mRNA |
| AF252871 | Trailer TCTTCG, Position 1384 Mus musculus GAMM1 protein mRNA |
| CGATGAAATT count=3 | |
| U43512 | Trailer ATTTCT, Position 2750 Mus musculus dystroglycan (Dag1) mRNA |
| CGGCAGAAGG count=3 | |
| U85489 | Trailer ATGAGG, Position 1145 Mus musculus Ah receptor-interacting protein (AIP) mRNA |
| CGGTGAGCAT count=3 | |
| Y18505 | Trailer CCAAAA, Position 1158 Mus musculus mRNA for XAP-5 protein. |
| CGTGCCCCCT count=3 | |
| M81483 | Trailer TCCTGG, Position 1677 Mus musculus calmodulin dependent phosphatase catalytic subunit |
| CGTGCTGAGC count=3 | |
| AF269152 | Trailer GTCGGC, Position 1688 Mus musculus transmembrane protein TM9SF1 (Tm9sf1) mRNA |
| CGTGTGAGGT count=3 | |
| D83745 | Trailer GTGCTG, Position 462 Mus musculus mRNA for ANA |
| Z72000 | Trailer GTGCTG, Position 480 M.musculus BTG3 mRNA. |
| CTAACTCTGA count=3 | |
| AB041659 | Trailer CCTTTC, Position 2602 Mus musculus brain cDNA |
| CTACATGTTA count=3 | |
| AF107847 | Trailer ATGGGT, Position 1112 Mus musculus neuroendocrine-specific Golgi protein p55 isoform 1 |
| AF005885 | Trailer AGAATT, Position 1754 Mus musculus cyclin G2 mRNA |
| CTATTCTTAG count=3 | |
| U51014 | Trailer GTCTAA, Position 1762 Mus musculus prolidase (pep4) mRNA |
| D82983 | Trailer GTCTAA, Position 1725 Mus musculus mRNA for prolidase |
| CTCAATAACC count=3 | |
| X57337 | Trailer TAAGCA, Position 1391 M.musculus CDNAp14 mRNA. |
| AB008548 | Trailer TAAGCA, Position 1350 Mus musculus mRNA for type 1 procollagen C-proteinase enhancer |
| CTCATCATCG count=3 | |
| X82438 | Trailer CGGGTA, Position 1263 M.musculus mRNA for monocarboxyalate transporter. |
| AF058055 | Trailer CGGGTA, Position 1452 Mus musculus monocarboxylate transporter 1 (mMCT1) mRNA |
| CTCCTGCCCC count=3 | |
| AJ005253 | Trailer GACAAG, Position 825 Mus musculus mRNA for ClpP protease. |
| CTCGCAGCTT count=3 | |
| AY004877 | Trailer CTATGA, Position 14049 Mus musculus cytoplasmic dynein heavy chain mRNA |
| CTCTTTGCCA count=3 | |
| D87990 | Trailer ACCCCA, Position 943 House mouse; Musculus domesticus mRNA for UDP-galactose transporter |
| CTGAATGACG count=3 | |
| AF118128 | Trailer TTCAGG, Position 1194 Mus musculus nuclear RNA helicase Bat1 mRNA |
| CTGAGAAAAG count=3 | |
| K02927 | Trailer CGGGGC, Position 2453 Mouse ribonucleotide reductase subunit M1 mRNA |
| CTGCAAGGCT count=3 | |
| Z14252 | Trailer GTTAAA, Position 2314 M.musculus ASM-1 mRNA for acidic sphingomyelinase. |
| CTGCTCCTCT count=3 | |
| L24118 | Trailer CTAGCC, Position 3219 Mouse primary response gene B94 mRNA |
| CTGGACATTC count=3 | |
| AJ249981 | Trailer CTTTCT, Position 1064 Mus musculus mRNA for hypothetical protein (ORF2 ortholog). |
| CTGGCAGATA count=3 | |
| AF017175 | Trailer CACCAA, Position 3506 Mus musculus liver carnitine palmitoyltransferase I mRNA |
| CTGGTCATTT count=3 | |
| M26687 | Trailer CTGGAC, Position 2207 Mouse ecotropic retrovirus receptor (W1) mRNA |
| CTGGTGGGCA count=3 | |
| AF144627 | Trailer CGGGGT, Position 5124 Mus musculus SLIT1 (Slit1) mRNA |
| CTGTGAAGAA count=3 | |
| L36663 | Trailer AGTTCT, Position 828 Mus musculus CArG box-binding factor mRNA |
| CTGTGGCTAA count=3 | |
| AF150101 | Trailer GTAAGA, Position 67 Mus musculus small zinc finger-like protein (Tim9a) mRNA |
| CTTCTAAGTG count=3 | |
| X78989 | Trailer CCATGA, Position 448 M.musculus mRNA for testin. |
| CTTCTGAATG count=3 | |
| U31966 | Trailer CCTGCT, Position 788 Mus musculus carbonyl reductase (Cbr1) mRNA |
| CTTGAAGGAT count=3 | |
| M61215 | Trailer TTGTAA, Position 2840 Mus musculus ferrochelatase mRNA |
| GAACAGGAGC count=3 | |
| U41765 | Trailer AGGGAG, Position 3393 Mus musculus metalloprotease/disintegrin/cysteine rich protein |
| GAACAGGATG count=3 | |
| U70139 | Trailer TACACT, Position 9135 Mus musculus probable nocturnin protein mRNA |
| AF199491 | Trailer TACACT, Position 1944 Mus musculus NOCTURNIN (Nocturnin) mRNA |
| AF183960 | Trailer TACACT, Position 2436 Mus musculus strain BALB/c carbon catabolite repression 4 protein |
| GACATTGTGA count=3 | |
| AF126798 | Trailer GTTCAC, Position 1343 Mus musculus delta-6 fatty acid desaturase mRNA |
| GACTACAGGA count=3 | |
| AF177032 | Trailer CAGCAG, Position 2920 Mus musculus guanine nucleotide exchange factor LFC mRNA |
| GAGAGGGTCG count=3 | |
| AF172447 | Trailer ATTCGT, Position 493 Mus musculus afadin mRNA |
| GCCAAAATCC count=3 | |
| AB015613 | Trailer TAAATT, Position 233 Mus musculus mRNA for SET |
| GCCACATCAC count=3 | |
| X78683 | Trailer AGAACC, Position 893 M.musculus mRNA for B-cell receptor associated protein (BAP) 37. |
| GCTTGCATAT count=3 | |
| X54149 | Trailer TTTTAA, Position 1204 Mouse mRNA for MyD118 |
| GGATTCACTA count=3 | |
| AF054670 | Trailer TGTAGG, Position 501 Mus musculus heme oxygenase-2b (HO-2b) mRNA |
| AF054669 | Trailer TGTAGG, Position 567 Mus musculus heme oxygenase 2a (HO-2a) mRNA |
| AF029874 | Trailer TGTAGG, Position 563 Mus musculus heme oxygenase-2 mRNA |
| GGGAGCTGAG count=3 | |
| M30856 | Trailer ATGGTG, Position 1244 Mouse interleukin 2 receptor mRNA |
| GGTCAGAAAG count=3 | |
| AF044334 | Trailer TCGGTT, Position 1408 Mus musculus pleiotropic regulator 1 (PLRG1) mRNA |
| GGTGCTGTCA count=3 | |
| X57277 | Trailer AATACC, Position 584 M.musculus rac1 gene. |
| GTCCTCCGCA count=3 | |
| U93702 | Trailer GCTATG, Position 882 Mus musculus lysosomal sialidase (NEU) mRNA |
| Y11412 | Trailer GCTATG, Position 885 M.musculus mRNA for sialidase G9. |
| GTTGTGTAGT count=3 | |
| D78135 | Trailer GAGCAC, Position 661 Mus musculus mRNA for CIRP |
| TAAAAACTCA count=3 | |
| U89876 | Trailer TGTAAA, Position 950 Mus musculus transcriptional coactivator ALY (ALY) mRNA |
| TAAAGAAACA count=3 | |
| U95498 | Trailer CCAGAG, Position 1205 Mus musculus AF1q mRNA |
| AB000733 | Trailer CCAGAG, Position 1217 Mouse mRNA for AF1q |
| TAACCAGGCC count=3 | |
| AJ250394 | Trailer TTAGTT, Position 896 Mus musculus mRNA for hypothetical protein (human Hc11orf5 gene |
| TAAGTCGCTC count=3 | |
| X99739 | Trailer CGTACA, Position 630 M.musculus mRNA for UBC9 protein |
| U82627 | Trailer CGTACA, Position 651 Mus musculus ubiquitin-conjugating enzyme mE2 mRNA |
| TAATCAAGCA count=3 | |
| U07861 | Trailer CGAGAG, Position 1539 Mus musculus zinc finger protein mRNA |
| TACAATCATG count=3 | |
| AF056574 | Trailer CTTGAC, Position 3285 Mus musculus pyrroline-5-carboxylate synthetase short isoform mRNA |
| AF056573 | Trailer CTTGAC, Position 3291 Mus musculus pyrroline-5-carboxylate synthetase long isoform mRNA |
| TACAGTTGTA count=3 | |
| U02887 | Trailer ATGAGA, Position 1950 Mus musculus DNA repair protein (XRCC1) mRNA |
| TACTGGAATA count=3 | |
| D50264 | Trailer GAAAGC, Position 743 Mouse mRNA for phosphatidylinositol glycan class F |
| TATCCTAGCC count=3 | |
| AF129888 | Trailer GGGAGG, Position 987 Mus musculus Sui1 homolog mRNA |
| TATTCATGAG count=3 | |
| Z19580 | Trailer GGGATT, Position 1055 M.musculus siah-1B protein mRNA. |
| TATTTAAGAG count=3 | |
| AF049890 | Trailer TTTAAT, Position 1643 Mus musculus tyrosylprotein sulfotransferase-2 mRNA |
| TCAATTGTAA count=3 | |
| AF133427 | Trailer ATAGAA, Position 1469 Mus musculus tetraspanin TM4-A homolog mRNA |
| TCACCATGTA count=3 | |
| X62700 | Trailer GCCCTA, Position 1372 M.musculus muPAR1 mRNA. |
| TCACCGTGAG count=3 | |
| AB010031 | Trailer GCCCCG, Position 1235 Mus musculus mRNA for outer arm dynein light chain 4 |
| TCAGCACAAT count=3 | |
| U73478 | Trailer AGAGCC, Position 329 Mus musculus acidic nuclear phosphoprotein pp32 mRNA |
| AF022957 | Trailer AGAGCC, Position 371 Mus musculus cerebellar leucine rich acidic nuclear protein (Lanp) |
| TCAGGAGACT count=3 | |
| AJ242954 | Trailer TCACCA, Position 4943 Mus musculus partial mRNA for dysferlin (dysf gene). |
| TCATTAAATG count=3 | |
| D28492 | Trailer GTGATT, Position 2670 Mus musculus mRNA for caspase-2 |
| Y13085 | Trailer GTGATT, Position 2749 M.musculus mRNA for caspase-2. |
| TCCAACATTT count=3 | |
| L25913 | Trailer TGGAGG, Position 1497 Mus musculus chaperonin mRNA |
| Z31554 | Trailer TGGAGG, Position 1658 M.musculus (129/Sv) Cctd mRNA for CCT (chaperonin containing TCP-1) |
| TCCACCCTAT count=3 | |
| AF004934 | Trailer GCGAGT, Position 724 Mus musculus Ste20-like kinase mRNA |
| TCGGGAGATT count=3 | |
| X70298 | Trailer GGCTGG, Position 1925 M.musculus sox-4 mRNA. |
| TCTAGCAAAT count=3 | |
| AF077002 | Trailer CCAGGT, Position 1183 Mus musculus 14-3-3 ETA mRNA |
| TCTATGTTCC count=3 | |
| AJ250690 | Trailer AAATNT, Position 216 Mus musculus partial mRNA for sr104 protein. |
| TCTGCAGTCA count=3 | |
| AB041592 | Trailer GAAGCT, Position 2962 Mus musculus brain cDNA |
| TCTGTATTTT count=3 | |
| X76341 | Trailer AATCAG, Position 1586 Mus musculus mRNA for glutathione reductase. |
| TCTTCATCAC count=3 | |
| D45210 | Trailer AGCGTA, Position 2707 Mouse mRNA for zinc finger protein |
| TCTTCTGAGT count=3 | |
| AJ011971 | Trailer ACCCCA, Position 3392 Mus musculus mRNA for wolframin. |
| AF084482 | Trailer ACCCCA, Position 3356 Mus musculus transmembrane protein (Wfs1) mRNA |
| TCTTGAGTTC count=3 | |
| AF179872 | Trailer AAGGCC, Position 1499 Mus musculus interferon-inducible T cell alpha chemoattractant |
| AF045741 | Trailer CAGGCC, Position 1474 Mus musculus deoxyribonuclease II precursor mRNA |
| TCTTTCATTG count=3 | |
| AF096285 | Trailer TACAAG, Position 1549 Mus musculus serine-threonine kinase receptor-associated protein |
| TGAAAGTAGA count=3 | |
| U59761 | Trailer CTCTGC, Position 1454 Mus musculus Na+ |
| TGATAAAATT count=3 | |
| M12899 | Trailer ACACCC, Position 1644 Mouse t complex polypeptide 1 (Tcp-1-b) mRNA |
| M20130 | Trailer ACACCC, Position 709 Mouse t complex polypeptide 1 (Tcp-1-a) mRNA |
| D90344 | Trailer ACACCC, Position 1637 Mouse mRNA for t-complex polypeptide 1A (Tcp-1a) |
| TGATACCCTC count=3 | |
| M31448 | Trailer TTCCGG, Position 43 Mouse B2 repetitive sequence mRNA |
| TGATGCACTC count=3 | |
| M84147 | Trailer GGGAGA, Position 1117 Mouse alcohol dehydrogenase-B2 (Adh-2) mRNA |
| TGCCACTGTG count=3 | |
| X14805 | Trailer CAGGTG, Position 5167 Mus musculus mRNA for DNA methyltransferase 1. |
| AF036009 | Trailer CAGGTG, Position 5786 Mus musculus Dnmt1 mRNA |
| AF036007 | Trailer CAGGTG, Position 5164 Mus musculus DNA (cytosine-5)-methyltransferase (Dnmt1) mRNA |
| TGCCCCTTTA count=3 | |
| L40459 | Trailer ATTTAC, Position 4088 Mus musculus latent transforming growth factor-beta binding protein |
| TGGCGCCCTC count=3 | |
| D10084 | Trailer TTCTGG, Position 160 Mus musculus aberrant mRNA for complement component C4. |
| TGGGCTTCAG count=3 | |
| D14850 | Trailer GAGCTG, Position 1208 Mouse mRNA for germ cell specific lamin C2 |
| X14170 | Trailer GAGCTG, Position 1682 Murine mRNA for lamin C. |
| TGGGGATGGA count=3 | |
| D88447 | Trailer GGTCTG, Position 1298 Mus musculus Rep-8 mRNA for reproduction 8 |
| TGTATTAACC count=3 | |
| AF113005 | Trailer TCTCTG, Position 3755 Mus musculus tight junction protein ZO-2 mRNA |
| TGTTTGTACT count=3 | |
| AB041652 | Trailer CTGTAT, Position 2242 Mus musculus brain cDNA |
| TTAATTACTC count=3 | |
| U73039 | Trailer ATAATA, Position 4368 Mus musculus Nbr1 (Nbr1) mRNA |
| TTACTTCATC count=3 | |
| AB032196 | Trailer CAGT , Position 1544 Mus musculus mRNA for zinc finger transcription factor ZNF207 |
| AB013357 | Trailer AAGTCT, Position 1492 Mus musculus mRNA for 49 kDa zinc finger protein |
| TTAGTAGGTA count=3 | |
| U35623 | Trailer TTTTAG, Position 3005 Mus musculus EAT/MCL-1 mRNA |
| TTATAAGTAA count=3 | |
| AF068780 | Trailer AGAGAA, Position 529 Mus musculus geminin mRNA |
| TTCAACCCTA count=3 | |
| M58566 | Trailer TCTTAA, Position 2325 Mouse TIS11 primary response gene |
| TTCGAAATCC count=3 | |
| AF226873 | Trailer TAGACT, Position 2280 Mus musculus small GTP-binding protein RAB1A mRNA |
| TTCTCAGATG count=3 | |
| X54327 | Trailer CAATTT, Position 3387 M.musculus mRNA for glutamyl-tRNA synthetase. |
| TTCTTAAAAC count=3 | |
| D38117 | Trailer AACCAA, Position 3113 Mus musculus mRNA for m-calpain large subunit |
| TTGCACCCCA count=3 | |
| AB021122 | Trailer AACTGG, Position 989 Mus musculus Tim23 mRNA for translocase of inner mitochondrial |
| TTTATTTGGA count=3 | |
| U04354 | Trailer TTGGCA, Position 2034 Mus musculus ADSEVERIN mRNA |
| Y13971 | Trailer TTGGCA, Position 1734 Mus musculus mRNA for adseverin(D5). |
| TTTCTGGCTC count=3 | |
| D78647 | Trailer CACTCA, Position 2330 Mouse mRNA for phospholipase A2 |
| TTTGAGGTGG count=3 | |
| AF068707 | Trailer ATAACT, Position 2351 Mus musculus gamma2-adaptin (G2ad) mRNA |
| TTTTGTCTGT count=3 | |
| AF159259 | Trailer TTTTTA, Position 2883 Mus musculus metastasis associated protein MTA2 (MTA2) mRNA |
| AAAACACCTT count=2 | |
| Z86007 | Trailer GTACTT, Position 61 M.musculus mRNA for Tcell receptor |
| AF224209 | Trailer GTACTT, Position 22 Mus musculus NTCR10.49 T cell receptor beta-chain CDR3 mRNA |
| AF224137 | Trailer GTACTT, Position 25 Mus musculus GBTCR10.33 T cell receptor beta-chain CDR3 gene |
| AF050428 | Trailer GTACTT, Position 169 Mus musculus clone Vb10S3WK T cell receptor beta chain CDR3 mRNA |
| AF050420 | Trailer GTACTT, Position 316 Mus musculus clone Vb10 T cell receptor beta chain CDR3 mRNA |
| AF005619 | Trailer GTACTT, Position 19 Mus musculus T cell receptor beta chain |
| AAAACCAACC count=2 | |
| M27358 | Trailer CGGTGA, Position 227 Mouse 18S ribosomal RNA |
| AAAACCCGAA count=2 | |
| AF236887 | Trailer ATAGAG, Position 696 Mus musculus protein kinase ATR (Atr) mRNA |
| AAAATATGCT count=2 | |
| AF169286 | Trailer GCAGAC, Position 866 Mus musculus protein tyrosine phosphatase-like protein PTPLB |
| AAAATCGCAG count=2 | |
| AF174535 | Trailer TTACTG, Position 1808 Mus musculus flavo-binding protein mRNA |
| AAACAGCTGT count=2 | |
| U90123 | Trailer ACCTCA, Position 1007 Mus musculus HN1 (Hn1) mRNA |
| AAACCAGCCT count=2 | |
| U20290 | Trailer GTTTTT, Position 791 Mus musculus V-1 protein mRNA |
| AAAGGCGTGC count=2 | |
| U79776 | Trailer GCACCA, Position 2773 Mus musculus ajuba (Ajuba) mRNA |
| AAAGTGTTGA count=2 | |
| M16179 | Trailer TTGGGA, Position 880 Mouse X/Y protein mRNA |
| M23529 | Trailer TTGGGA, Position 923 Mus musculus complement receptor (CRY) mRNA |
| AAATTGAGAG count=2 | |
| U02487 | Trailer TAGACG, Position 4306 Mus musculus LAF putative membrane protein (KRAG) mRNA |
| AACAACCTCA count=2 | |
| D14175 | Trailer AAAATG, Position 245 Mouse mRNA for immunoglobulin heavy chain variable region (anti-CD8 |
| AF015770 | Trailer GCTCTG, Position 330 Mus musculus radical fringe (radical-fringe) mRNA |
| AF006482 | Trailer TTTAAA, Position 2083 Mus musculus nucleoside triphosphatase (NTPase) mRNA |
| AJ272046 | Trailer GCTTCA, Position 462 Mus musculus mRNA for calcium channel gamma 5 subunit (CACNG5 |
| AJ132830 | Trailer ACTGGG, Position 1953 Mus musculus mRNA for ORC3-related protein. |
| AF176910 | Trailer TTGATA, Position 2454 Mus musculus cullin 1 (Cul1) mRNA |
| AF136441 | Trailer TTGATA, Position 2414 Mus musculus cullin 1 (Cul1) mRNA |
| AF083216 | Trailer TTGATA, Position 2289 Mus musculus SCF complex protein cul-1 mRNA |
| AF303829 | Trailer TGAAAT, Position 643 Mus musculus ubc-like protein CROC1 (Croc1) mRNA |
| AAGACAAGTG count=2 | |
| J02623 | Trailer , Position 1952 Mouse cytosolic aspartate aminotransferase isoenzyme mRNA |
| AAGAGGAAAG count=2 | |
| X98293 | Trailer GAGATG, Position 1660 M.musculus mRNA for protein involved in DNA double-strand break |
| AAGAGGAAGC count=2 | |
| Y10968 | Trailer ACAATA, Position 552 M.musculus E800 mRNA. |
| AAGATAGGAA count=2 | |
| AJ011740 | Trailer CACAAG, Position 1292 Mus musculus mRNA for integrase interactor 1a protein (INI1A). |
| AJ011739 | Trailer CACAAG, Position 1292 Mus musculus mRNA for integrase interactor 1a protein (INI1A). |
| AB041578 | Trailer CACAAG, Position 1274 Mus musculus brain cDNA |
| AB017344 | Trailer CACAAG, Position 1072 Mus musculus Ini1 27deletion mRNA for Integrase interactor |
| AB017343 | Trailer CACAAG, Position 1099 Mus musculus mRNA for Integrase interactor 1 |
| AAGCAAACAC count=2 | |
| AF169388 | Trailer TGTACA, Position 5551 Mus musculus alpha 4 collagen IV (Col4a4) mRNA |
| AAGCACTGCC count=2 | |
| AJ245569 | Trailer AAGTCA, Position 4495 Mus musculus partial mRNA for hypothetical protein (ORF37 DNA). |
| AAGCCTGTTA count=2 | |
| U12922 | Trailer GCCCTG, Position 939 Mus musculus CD1 geranylgeranyl transferase beta subunit mRNA |
| AF231926 | Trailer GCCCTG, Position 1021 Mus musculus Rab geranylgeranyl transferase |
| AAGGACGAGG count=2 | |
| U85089 | Trailer ACCAGC, Position 501 Mus musculus thioredoxin mRNA |
| AAGGGTTCCC count=2 | |
| AF200357 | Trailer TTCCAA, Position 2590 Mus musculus pantothenate kinase 1 beta (panK1beta) mRNA |
| AAGGTAGTAC count=2 | |
| AF175903 | Trailer CGTGTT, Position 823 Mus musculus ubiquitin C-terminal hydrolase UCH-L5 mRNA |
| AF148447 | Trailer CGTGTT, Position 817 Mus musculus ubiquitin C-terminal hydrolase UCH37 (UCH37) mRNA |
| AAGGTCCACT count=2 | |
| U29530 | Trailer TAGTGG, Position 254 Mus musculus clone TA-9 ATP synthase b chain homolog mRNA |
| AAGGTGCGCA count=2 | |
| AB007143 | Trailer GGCGCG, Position 831 Mus musculus mRNA for ZIP-kinase |
| AAGTAGAAGT count=2 | |
| AF195142 | Trailer CAATAA, Position 825 Mus musculus selenoprotein R mRNA |
| AATAATGGAG count=2 | |
| X66091 | Trailer GCAATG, Position 1490 M.musculus ASF mRNA. |
| AATGGGCAGC count=2 | |
| AB011081 | Trailer AGCAAT, Position 453 Mus musculus mRNA for huntingtin interacting protein-2 |
| AATTGTAAAT count=2 | |
| X16493 | Trailer AGACAT, Position 1907 M.musculus mRNA for Zpf-1 zinc finger protein. |
| AATTGTGCTT count=2 | |
| AB026569 | Trailer TAGGAA, Position 1445 Mus musculus mRNA for MSSP |
| AATTTGCCAT count=2 | |
| AJ007661 | Trailer GTGTAT, Position 2789 Mus musculus mRNA for cdc7-related kinase. |
| AB018575 | Trailer GTGTAT, Position 2840 Mus musculus muCdc7 mRNA |
| AB018574 | Trailer GTGTAT, Position 2744 Mus musculus muCdc7 mRNA |
| ACAAGGCTGA count=2 | |
| AF155647 | Trailer AAACAA, Position 1813 Mus musculus adaptor protein GRB14 (Grb14) mRNA |
| ACAATGAAGC count=2 | |
| L10426 | Trailer AAAAAA, Position 2479 Mus musculus ets-related protein 81 (ER81) mRNA |
| ACACAATGGA count=2 | |
| U96688 | Trailer GAATCT, Position 1957 Mus musculus immunoglobulin-like receptor PIRA7 (16M2) mRNA |
| U96686 | Trailer GAATCT, Position 1633 Mus musculus immunoglobulin-like receptor PIRA5 (7M4) mRNA |
| U96685 | Trailer GAATCT, Position 1929 Mus musculus immunoglobulin-like receptor PIRA4 (6M7) mRNA |
| U96683 | Trailer GAATCT, Position 1916 Mus musculus immunoglobulin-like receptor PIRA2 (6M23) mRNA |
| AF055896 | Trailer GAATCT, Position 1870 Mus musculus killer activatory receptor-like protein p91D mRNA |
| AF041035 | Trailer GAATCT, Position 1921 Mus musculus killer cell inhibitory receptor-like protein p91B |
| ACACCATGAC count=2 | |
| AB041657 | Trailer TGTAGT, Position 1368 Mus musculus brain cDNA |
| ACAGCAGTAA count=2 | |
| AB041555 | Trailer ATGTGA, Position 1903 Mus musculus brain cDNA |
| ACATTTATGC count=2 | |
| D50523 | Trailer CCCTGT, Position 3475 Mouse mRNA for TI-227. |
| ACCAAACACA count=2 | |
| J00409 | Trailer AGTGGG, Position 237 Mouse MHC class I H2 gene (haplotype k) |
| M13200 | Trailer AGTGGG, Position 150 Mouse MHC class I H2-K-alpha-2 gene (haplotype bm9) |
| M18631 | Trailer AGTGGG, Position 18 Mouse MHC class I mutant H-2Kkml mRNA. |
| M34932 | Trailer AGTGGG, Position 423 Mouse MHC class I H-2K-kml mRNA (H-2K-kml haplotype) |
| U55818 | Trailer AGTGGG, Position 159 Mus musculus MHC class I antigen H-2K (H-2K) mRNA |
| U55817 | Trailer AGTGGG, Position 159 Mus musculus MHC class I antigen H-2D (H-2D) mRNA |
| ACCAATGCCT count=2 | |
| M13444 | Trailer GTTTTG, Position 899 Mouse alpha-tubulin isotype M-alpha-4 mRNA |
| ACCTGCTCTA count=2 | |
| J02652 | Trailer ATGTCC, Position 2617 Mouse malate NADP oxidoreductase mRNA |
| M26756 | Trailer ATGTCC, Position 2559 Mouse malic enzyme mRNA |
| ACCTGGTGCC count=2 | |
| AF033017 | Trailer ATACAC, Position 1489 Mus musculus TWIK-1 K+ channel mRNA |
| ACTAAGAAAT count=2 | |
| X62743 | Trailer AAACTG, Position 1149 M.musculus Mb mRNA. |
| ACTCGTTTCA count=2 | |
| AF093261 | Trailer GCTGAG, Position 2174 Mus musculus homer-3 mRNA |
| ACTCTCATAC count=2 | |
| AB041602 | Trailer GATACG, Position 1898 Mus musculus brain cDNA |
| ACTCTCCTCA count=2 | |
| L19558 | Trailer ACTATT, Position 1538 Mus musculus protein kinase (MSTPK13) mRNA |
| L06144 | Trailer ACTATT, Position 1894 Mus musculus protein kinase (Plk) mRNA |
| U01063 | Trailer ACTATT, Position 1452 Mus musculus pLK serine/threonine kinase mRNA |
| ACTCTGAATG count=2 | |
| L10406 | Trailer GCATCT, Position 86 Mouse fork head related protein mRNA |
| ACTTATCCAA count=2 | |
| Y12880 | Trailer GTATCT, Position 812 Mus musculus mRNA for polycomb-M33 interacting protein Ring1B. |
| Y12783 | Trailer GTATCT, Position 367 M.musculus mRNA for ring1B |
| ACTTCCTCGG count=2 | |
| X65021 | Trailer ATATTT, Position 874 M.musculus mRNA for glutathione S-transferase. |
| AGAAAAATAA count=2 | |
| X67677 | Trailer GGCAGA, Position 4155 M.musculus c-yes mRNA. |
| AGAAACTGTC count=2 | |
| AF271213 | Trailer CTCTGA, Position 1071 Mus musculus disrupter of silencing SAS10 (Sas10) mRNA |
| AF155362 | Trailer CTCTGA, Position 1066 Mus musculus brain-specific transcription factor BLF-1 (Blf-1) |
| AGAAGAAAGC count=2 | |
| AF120321 | Trailer AACACC, Position 40 Mus musculus clone an01-h01 mRNA sequence. |
| AGAAGGACAG count=2 | |
| AF004326 | Trailer CGTGCA, Position 1924 Mus musculus angiopoietin-2 mRNA |
| AGAGAGAGAA count=2 | |
| L07924 | Trailer GCCCTC, Position 3324 Mus musculus guanine nucleotide dissociation stimulator for a |
| AGAGGAGTAA count=2 | |
| M63503 | Trailer ATAGTG, Position 2905 Mouse keratinocyte growth factor receptor mRNA |
| M86441 | Trailer ATAGTG, Position 3180 M.musculus BEK FGF receptor mRNA |
| AGAGGCTTCT count=2 | |
| AF247177 | Trailer GCAAGA, Position 1482 Mus musculus sphingosine-1-phosphate phosphohydrolase (Spp1) mRNA |
| AGCAACTCCT count=2 | |
| AF091872 | Trailer GCTTCA, Position 222 Mus musculus molybdopterin-synthase small and large subunit (Mocs2) |
| AGCAACTTAC count=2 | |
| AF121907 | Trailer CCAGTC, Position 1637 Mus musculus cytokine inducible SH2-containing protein CIS4 (Cis4) |
| AGCATCAGCA count=2 | |
| M97900 | Trailer TCAGCA, Position 2671 Mouse open reading frame mRNA sequence. |
| U74079 | Trailer CCCACC, Position 1302 Mus musculus protein co-factor mRNA |
| AGCCAGGACC count=2 | |
| AF026489 | Trailer CTCAGA, Position 449 Mus musculus beta III spectrin (Spnb3) mRNA |
| AGCCTCAGCA count=2 | |
| U10420 | Trailer AACAGC, Position 978 Mus musculus 3T3L1 methyl purine glycosylase (Mpg) mRNA |
| AGCCTCTGCT count=2 | |
| D86604 | Trailer GCACCT, Position 4963 Mouse mRNA for Bach protein 2 |
| AGCTGCGTCT count=2 | |
| AF035207 | Trailer GTAGAG, Position 1970 Mus musculus Nip2l mRNA |
| AGCTTCCCAT count=2 | |
| AF169408 | Trailer ATGAAC, Position 1429 Mus musculus non-secreted phospholipase A2 (Splash) mRNA |
| AF169407 | Trailer ATGAAC, Position 1429 Mus musculus phospholipase A2 (Splash) mRNA |
| AGGAGCTGGA count=2 | |
| D86609 | Trailer GAGAAA, Position 137 Mouse mRNA for RPA16 |
| AGGCTAGCTT count=2 | |
| AF190731 | Trailer TAAACT, Position 1659 Mus musculus GTPase ERA-S mRNA |
| AF190730 | Trailer TAAACT, Position 1891 Mus musculus GTPase ERA-W mRNA |
| AGGCTGAGCT count=2 | |
| U97675 | Trailer GAATGT, Position 1888 Mus musculus embryonic ectoderm development protein (EED) mRNA |
| U78103 | Trailer GAATGT, Position 1883 Mus musculus embryonic ectoderm development protein (eed) mRNA |
| AGGGAAGTTC count=2 | |
| D49382 | Trailer ATTGTG, Position 2768 Mus musculus Nedd5 mRNA for septin |
| AGGTCATCGC count=2 | |
| U41416 | Trailer CTCCTT, Position 130 Mus musculus BALB/c 3T3 non-muscle alpha-actinin (FR-17) mRNA |
| AJ289242 | Trailer CTCCTT, Position 5660 Mus musculus mRNA for alpha-actinin 4 (Actn4 gene). |
| AGGTGTCAGT count=2 | |
| Y19008 | Trailer TTTCTA, Position 2601 Mus musculus mRNA for ATP:D-fructose 6-phosphate |
| AF123533 | Trailer TTTCTA, Position 2609 Mus musculus phosphofructokinase-1 C isozyme mRNA |
| AGTATTGTGA count=2 | |
| AF057285 | Trailer GTGCAT, Position 698 Mus musculus intersectin-EH binding protein Ibp1 mRNA |
| AGTCACAACC count=2 | |
| AF083339 | Trailer TAGCTT, Position 3279 Mus musculus double-stranded RNA-binding zinc finger protein JAZ |
| AGTCAGCAGA count=2 | |
| AJ251804 | Trailer TTAACA, Position 2603 Mus musculus mRNA for DNA polymerase mu (Polm gene). |
| AF176098 | Trailer TTAACA, Position 2633 Mus musculus DNA polymerase mu (Pol mu) mRNA |
| AGTCCTCTAG count=2 | |
| AB041648 | Trailer CATTTC, Position 1352 Mus musculus brain cDNA |
| AGTGACAGTG count=2 | |
| X95600 | Trailer GAAACC, Position 1961 M.musculus mRNA for cadherin-8. |
| AGTGTGATAG count=2 | |
| AF157598 | Trailer GCTCCT, Position 1380 Mus musculus HSP40-like protein mRNA |
| AGTTAATCCT count=2 | |
| AF144133 | Trailer AACGCT, Position 806 Mus musculus imidazoline receptor I-1-like protein mRNA |
| AGTTAATTTA count=2 | |
| U75680 | Trailer CCATGT, Position 1484 Mus musculus histone stem-loop binding protein (SLBP) mRNA |
| AGTTAGGCTC count=2 | |
| U29156 | Trailer TTCCTT, Position 2949 Mus musculus eps15R mRNA |
| AGTTCACTAC count=2 | |
| AF032131 | Trailer ATGTGA, Position 1885 Mus musculus E2F-like transcriptional repressor protein mRNA |
| AGTTCAGACA count=2 | |
| U22015 | Trailer ACTGTG, Position 1894 Mus musculus retinoid X receptor interacting protein (RIP110) mRNA |
| AGTTTTTTAA count=2 | |
| AJ237586 | Trailer GAGATG, Position 2245 Mus musculus mRNA for hypothetical protein expressed in thymocytes |
| ATAAAAAAAA count=2 | |
| U69171 | Trailer AAAAAA, Position 1445 Mus musculus peroxisomal PTS2 receptor mRNA |
| ATAATTAGCT count=2 | |
| D16333 | Trailer AACATT, Position 2376 Mouse mRNA for coproporphyrinogen oxidase |
| ATCAATGACG count=2 | |
| U53514 | Trailer ACCTGG, Position 528 Mus musculus guanylate kinase (gmk) mRNA |
| ATCCCAAAGG count=2 | |
| AB041564 | Trailer CCCAAG, Position 1824 Mus musculus brain cDNA |
| ATCCGTGAGG count=2 | |
| D43643 | Trailer CGTACA, Position 990 Mouse YL-1 mRNA for YL-1 protein (nuclear protein with DNA-binding |
| ATCGTAAATG count=2 | |
| AF199010 | Trailer ACAATC, Position 1845 Mus musculus PALS2-beta splice variant (Pals2) mRNA |
| AF199009 | Trailer ACAATC, Position 1803 Mus musculus PALS2-alpha splice variant (Pals2) mRNA |
| AF161181 | Trailer ACAATC, Position 1671 Mus musculus P55T protein mRNA |
| ATCTAATGAA count=2 | |
| U39643 | Trailer GTGTTA, Position 1781 Mus musculus FAF1 mRNA |
| ATCTTGTCAC count=2 | |
| D16262 | Trailer TCCTTT, Position 1765 Mouse mRNA encoding unknown protein |
| ATGCAACAAA count=2 | |
| AF073517 | Trailer AGCAGA, Position 301 Mus musculus small EDRK-rich factor 1 (Serf1) mRNA |
| ATGCAGCTGC count=2 | |
| Z18857 | Trailer ACCACA, Position 170 M.musculus mRNA for manganese superoxide dismutase. |
| X04972 | Trailer ACCACA, Position 187 Mouse mRNA for manganese superoxide dismutase (MnSOD). |
| AF058799 | Trailer TCCGAG, Position 845 Mus musculus 14-3-3 protein gamma mRNA |
| ATGGTGATTT count=2 | |
| AF093064 | Trailer TATTGC, Position 675 Mus musculus syntaxin-like protein 3I35 mRNA |
| AF036716 | Trailer TATTGC, Position 653 Mus musculus syntaxin 8 mRNA |
| ATTAAGCTCA count=2 | |
| AJ001616 | Trailer TCTTTT, Position 2265 Mus musculus mRNA for myeloid associated differentiation protein. |
| ATTAGTGTTA count=2 | |
| AF169243 | Trailer AAGAAA, Position 1659 Mus musculus heparan sulfate 2-O-sulfotransferase mRNA |
| AF060178 | Trailer AAGAAA, Position 1668 Mus musculus heparan sulfate 2-sulfotransferase (Hs2st) mRNA |
| ATTATTTTGG count=2 | |
| X81816 | Trailer CACCAT, Position 870 M.musculus BAP31 mRNA. |
| ATTCACAGAA count=2 | |
| M80739 | Trailer CAGAGT, Position 970 1570 bp. |
| M81477 | Trailer CAGAGT, Position 970 Mouse cytoplasmic phosphotyrosine phosphatase mRNA |
| ATTCTTTTAA count=2 | |
| AJ401619 | Trailer ACAT , Position 2182 Mus musculus mRNA for putative lipid kinase. |
| ATTGGAGAGA count=2 | |
| M74590 | Trailer ACTCAC, Position 765 Mouse delta transcription factor mRNA |
| ATTGTCACTG count=2 | |
| M88694 | Trailer ACTACA, Position 251 Mus musculus thioether S-methyltransferase mRNA |
| ATTGTGAACA count=2 | |
| L40406 | Trailer CCTCGT, Position 3330 Mus musculus heat shock protein (hsp-E7I) mRNA |
| D67017 | Trailer CCTCGT, Position 3191 Mus wagneri mRNA for heat shock protein 105 kDa beta (42 degrees |
| D67016 | Trailer CCTCGT, Position 3236 Mus wagneri mRNA for heat shock protein 105 kDa alpha |
| ATTTCACGGA count=2 | |
| U21011 | Trailer TAAAGG, Position 2831 Mus musculus MutS homolog 2 (mMSH2) mRNA |
| X81143 | Trailer TAAAGG, Position 2814 M.musculus msh2 mRNA. |
| ATTTGCCTCT count=2 | |
| AF096286 | Trailer TATTTG, Position 6081 Mus musculus pecanex 1 mRNA |
| ATTTTTATAT count=2 | |
| L33417 | Trailer TACTTT, Position 2786 Mus musculus very low density lipoprotein receptor (VLDLR) |
| U06670 | Trailer TACTTT, Position 2948 Mus musculus very low density lipoprotein receptor mRNA |
| CAAAAATACA count=2 | |
| AF218847 | Trailer GCCTGC, Position 2070 Mus musculus NIMA-related serine/threonine kinase (Nek6) mRNA |
| CAAACACACA count=2 | |
| M34857 | Trailer CTAGGA, Position 936 Mouse Hox-2.5 mRNA. |
| CAAACTTAAC count=2 | |
| U95116 | Trailer GAGCCC, Position 4419 Mus musculus lissencephaly-1 protein (LIS-1) mRNA |
| CAAAGGCAGC count=2 | |
| AB041613 | Trailer AAGAAG, Position 1295 Mus musculus brain cDNA |
| CAAATAAAAC count=2 | |
| X95351 | Trailer CTCGAA, Position 2434 M.musculus mRNA for pMELK protein. |
| CAACCCCACC count=2 | |
| AB011001 | Trailer TCAAGT, Position 2041 Mus musculus mRNA for choline/ethanolamine kinase |
| AB011000 | Trailer TCAAGT, Position 1486 Mus musculus mRNA for choline/ethanolamine kinase |
| CAAGTCCAGG count=2 | |
| L03814 | Trailer AACCCT, Position 1225 Mouse regulatory protein (npdc-1) mRNA |
| X67209 | Trailer AACCCT, Position 1225 M.musculus npdc-1 mRNA for npdcf-1 protein. |
| CACACCTGAA count=2 | |
| D86563 | Trailer ATGCTA, Position 1313 Mus musculus mRNA for rab 4 |
| CACCTGCTTC count=2 | |
| Y11895 | Trailer TGCCCC, Position 2211 M.musculus mRNA for M-Delta-like 3 gene. |
| CAGAAACTGA count=2 | |
| X61452 | Trailer GAAGCT, Position 1371 M.musculus mRNA for H5 clone. |
| CAGAACAGTA count=2 | |
| U14172 | Trailer CAGCGT, Position 4765 Mus musculus p162 protein mRNA |
| CAGACAGCAA count=2 | |
| AB025269 | Trailer TCCTTA, Position 1454 Mus musculus Fxr2h mRNA |
| CAGACAGCAC count=2 | |
| D87744 | Trailer CCACTG, Position 3585 Mouse mRNA for DRPLA protein |
| CAGAGATGAA count=2 | |
| U41287 | Trailer GGTCGA, Position 1355 Mus musculus zinc finger protein (ZPR1) mRNA |
| AB041612 | Trailer GGTCGA, Position 1283 Mus musculus brain cDNA |
| CAGAGCCTGA count=2 | |
| D49544 | Trailer TTCCCT, Position 1889 Mouse mRNA for KIFC1 |
| AF221102 | Trailer TTCCCT, Position 2152 Mus musculus kinesin-related protein KIFC5A mRNA |
| CAGAGGCCCT count=2 | |
| Y08922 | Trailer AGCCAG, Position 4187 M.musculus mRNA for Dres9 protein. |
| X98655 | Trailer AGCCAG, Position 79 M.musculus mRNA for 3'UTR of DRES9 gene. |
| AF006467 | Trailer AGCCAG, Position 3761 Mus musculus membrane-associated phosphatidylinositol transfer |
| CAGATGTAAA count=2 | |
| U85993 | Trailer ATAATT, Position 851 Mus musculus clone IMAGE:349147 unknown protein mRNA |
| CAGCACCGTG count=2 | |
| U18975 | Trailer TGTACC, Position 2010 Mus musculus beta-1 |
| CAGCCTGACC count=2 | |
| U10118 | Trailer TGCACA, Position 876 Mus musculus endothelial-monocyte activating polypeptide II mRNA |
| CAGCTCAGCC count=2 | |
| M74751 | Trailer AGGCCA, Position 1188 Mouse myosin heavy chain mRNA |
| M12290 | Trailer AGGCCA, Position 87 Mouse alpha-(V1) cardiac myosin heavy chain mRNA. |
| X97818 | Trailer CAGGTC, Position 3569 M.musculus mRNA for semaphorin G. |
| CAGGACCTGG count=2 | |
| AF168675 | Trailer TAGCAA, Position 960 Mus musculus TNF intracellular domain-interacting protein mRNA |
| CAGGCAGGAG count=2 | |
| AJ277114 | Trailer CTGAAA, Position 1666 Mus musculus ORF1 for hypothetical protein |
| CAGGCCAAGT count=2 | |
| AF039405 | Trailer ACCTGG, Position 891 Mus musculus arsenite-translocating ATPase (ArsA) mRNA |
| CAGGTTCAGT count=2 | |
| X57377 | Trailer ATGTCT, Position 6810 Mouse dilute myosin heavy chain gene for novel heavy chain with |
| CAGTGAGGCC count=2 | |
| AF235503 | Trailer AGGCAC, Position 1775 Mus musculus SMAR1 mRNA |
| AF091234 | Trailer AGGCAC, Position 1658 Mus musculus putative transcription factor mRNA |
| CATCAATTTT count=2 | |
| X95399 | Trailer TAGTAT, Position 185 M.musculus mRNA for M31 protein |
| CATCACTTCA count=2 | |
| U41751 | Trailer TGGAGA, Position 456 Mus musculus EI24 (EI24) mRNA |
| CATGCAAACT count=2 | |
| Z54179 | Trailer GCCGTA, Position 686 M.musculus mRNA (evolutionary conserved transcript). |
| CATTTTAATA count=2 | |
| AF061262 | Trailer TTTGTT, Position 1148 Mus musculus semaF cytoplasmic domain associated protein 2 |
| CCAAATTTGA count=2 | |
| U77128 | Trailer AGTCAT, Position 296 Mus musculus mitochondrial ATP synthase coupling factor 6 mRNA |
| CCAACAATGC count=2 | |
| AF175574 | Trailer AGCCAT, Position 1054 Mus musculus 26S proteasome subunit S5a mRNA |
| AF013099 | Trailer AGCCAT, Position 1045 Mus musculus multiubiquitin-chain-binding protein (Mcb1) mRNA |
| AB029144 | Trailer AGCCAT, Position 1547 Mus musculus mRNA for pUb-R3 |
| AB029143 | Trailer AGCCAT, Position 1054 Mus musculus mRNA for pUb-R2 |
| AB029142 | Trailer AGCCAT, Position 1045 Mus musculus mRNA for pUb-R1 |
| CCAAGAAAAA count=2 | |
| AB028861 | Trailer GACTCG, Position 1330 Mus musculus mRNA for mDj11 |
| CCAATGCTGC count=2 | |
| AF074714 | Trailer CCCATC, Position 2620 Mus musculus mitogen- and stress-activated protein kinase-2 (mMSK2) |
| CCACAGGTCT count=2 | |
| AF090686 | Trailer TTCATG, Position 1601 Mus musculus transcobalmin II (Tcn2) mRNA |
| CCACCTCCCC count=2 | |
| U70315 | Trailer CCAGTC, Position 272 Mus musculus U1 snRNP-specific protein C mRNA |
| X96767 | Trailer CCAGTC, Position 259 M.musculus mRNA for U1 snRNP-specific protein C. |
| CCAGCACTGC count=2 | |
| AB030505 | Trailer AAAAGA, Position 3884 Mus musculus mRNA for UBE-1c1 |
| CCAGCATGGT count=2 | |
| D50050 | Trailer CAGCGC, Position 1918 Mouse mRNA for Hrs |
| CCAGGAGTCA count=2 | |
| L06047 | Trailer AGCTCT, Position 830 Mus musculus glutathione transferase mRNA |
| CCAGGTAATT count=2 | |
| AF031903 | Trailer AGTATA, Position 1147 Mus musculus ADP-ribosylation-like factor homolog ARL6 (Arl6) mRNA |
| CCATTTAAAT count=2 | |
| M15668 | Trailer TCCTTA, Position 1443 Mus musculus X chromosome-linked phosphoglycerate kinase (pgk-1) |
| CCATTTGTGA count=2 | |
| X55123 | Trailer ATAAGC, Position 1745 Mouse mRNA for GATA-3 transcription factor. |
| CCCAAGATTG count=2 | |
| U60329 | Trailer AGGATG, Position 385 Mus musculus proteasome activator PA28 beta subunit mRNA |
| D87910 | Trailer AGGATG, Position 403 Mus musculus mRNA for PA28 beta subunit |
| CCCAGCCACA count=2 | |
| AF018262 | Trailer GAATGG, Position 1234 Mus musculus protein phosphatase 5 (PP5) mRNA |
| CCCATCTCCA count=2 | |
| AB030190 | Trailer TCAACA, Position 953 Mus musculus mRNA |
| CCCTGCAACA count=2 | |
| U07634 | Trailer AGACAT, Position 3642 Mus musculus receptor-protein tyrosine kinase (eck) mRNA |
| CCCTTAGGTG count=2 | |
| X67319 | Trailer GTTGTA, Position 4550 M.musculus mRNA for transcript overlapping myelin basic protein |
| CCCTTGGTTG count=2 | |
| AB024303 | Trailer CTGGAT, Position 1823 Mus musculus mRNA similar to human Sua1 |
| CCGCCAAAAG count=2 | |
| M38381 | Trailer AATTAC, Position 1463 Mouse serine threonine tyrosine kinase (STY) mRNA |
| L29221 | Trailer AATTAC, Position 1372 Mus musculus clk mRNA |
| U21209 | Trailer AATTAC, Position 1203 Mus musculus nuclear dual specificity kinase T-Sty (sty) mRNA |
| X57186 | Trailer AATTAC, Position 1447 Mouse clk mRNA for protein kinase. |
| CCTAAACTAC count=2 | |
| U85614 | Trailer CTCTTG, Position 4409 Mus musculus SRG3 mRNA |
| CCTAAGGAGG count=2 | |
| AF156958 | Trailer AGGCGC, Position 169 Mus musculus NTF2-related export protein NXT1 (NXT1) mRNA |
| CCTACCGCCA count=2 | |
| AB030201 | Trailer GCTGCG, Position 500 Mus musculus mRNA |
| CCTCTGCAAA count=2 | |
| AF021847 | Trailer CCAAAC, Position 2725 Mus musculus micromolar calcium activated neutral protease large |
| CCTGAGTTCA count=2 | |
| U58884 | Trailer AGGCCA, Position 2218 Mus musculus SH3-containing protein SH3P7 mRNA |
| CCTGCACAAG count=2 | |
| AF071186 | Trailer GTGTTT, Position 1436 Mus musculus WW domain binding protein 11 mRNA |
| CCTGCTCTTA count=2 | |
| AB020202 | Trailer GGTGCT, Position 791 Mus musculus mRNA for adenylate kinase isozyme 2 |
| CCTGTGGATT count=2 | |
| AF030100 | Trailer TTGAAA, Position 1076 Mus musculus TWEAK mRNA |
| CCTTCTTTTA count=2 | |
| AF069519 | Trailer ATAATT, Position 1245 Mus musculus T:G mismatch-specific thymine-DNA glycosylase TDGb |
| CGAATAATCC count=2 | |
| AF058798 | Trailer AGGAGG, Position 1196 Mus musculus 14-3-3 protein sigma mRNA |
| CGAATGATGT count=2 | |
| AF179369 | Trailer CGCTCA, Position 1192 Mus musculus insulin-like growth factor binding protein 5 protease |
| AF172994 | Trailer CGCTCA, Position 1197 Mus musculus serine protease HTRA mRNA |
| CGAATTACCT count=2 | |
| D14340 | Trailer TGTTGG, Position 5585 Mus musculus mRNA for ZO-1 |
| CGACTGTGCC count=2 | |
| AF013118 | Trailer CGGATG, Position 189 Mus musculus kinesin motor protein KIFC3 mRNA |
| AB001457 | Trailer CGGATG, Position 216 Mus musculus mRNA for motor domain of KIFC3 |
| CGCTGTACTC count=2 | |
| AF071209 | Trailer TCCTCC, Position 1528 Mus musculus pituitary tumor transforming gene (Pttg) mRNA |
| AF069051 | Trailer TCCTCC, Position 814 Mus musculus pituitary tumor transforming gene protein (PTTG) mRNA |
| CGTTTGGCCT count=2 | |
| AB025048 | Trailer CTCAAT, Position 1841 Mus musculus mRNA for Sid6061p |
| CTACACACCT count=2 | |
| AF038848 | Trailer ACCAGA, Position 560 Mus musculus transcriptional repressor SIN3B (Sin3B) mRNA |
| CTACCAGCTA count=2 | |
| X56906 | Trailer CCACAG, Position 1615 Mouse OP-1 mRNA for osteogenic protein 1. |
| CTAGAAGGAC count=2 | |
| AB041553 | Trailer AGCTTT, Position 1320 Mus musculus brain cDNA |
| CTAGCGGACC count=2 | |
| AJ275987 | Trailer TCAACC, Position 512 Mus musculus mRNA for Krueppel-like factor 13 (Klf13 gene). |
| AJ245644 | Trailer TCAACC, Position 499 Mus musculus mRNA for BTEB3 protein (BTEB3 gene). |
| AF252285 | Trailer TCAACC, Position 542 Mus musculus RANTES factor of late activated T lymphocytes-1 mRNA |
| AF251796 | Trailer TCAACC, Position 563 Mus musculus erythroid transcription factor FKLF-2 mRNA |
| CTATGTTGCT count=2 | |
| U97079 | Trailer GGAGCT, Position 2887 Mus musculus U5-116kD mRNA |
| CTCAAAGGCA count=2 | |
| AF229634 | Trailer GCTCAG, Position 765 Mus musculus solute carrier family 35 member 2 (Slc35a2) mRNA |
| CTCAACTCCT count=2 | |
| AF221713 | Trailer GCACAG, Position 2466 Mus musculus huntingtin interacting protein 1 related mRNA |
| CTCAAGTACA count=2 | |
| U45978 | Trailer GTGAGT, Position 1215 Mus musculus calcium-binding protein Cab45b mRNA |
| D50461 | Trailer GTGAGT, Position 1442 Mouse SDF4 mRNA |
| CTCACCACAT count=2 | |
| L31927 | Trailer ACCCAG, Position 447 Mus musculus mRNA fragment. |
| CTCACCAGCC count=2 | |
| AB015652 | Trailer GCGGGC, Position 555 Mus musculus mRNA for DJ-1 |
| CTCCAGAAGG count=2 | |
| AF103809 | Trailer TTGTAA, Position 3177 Mus musculus Ap-3 complex beta3A subunit (Ap3b1) mRNA |
| CTCCTCCCTG count=2 | |
| X78709 | Trailer GGCAGG, Position 3817 M.musculus NRF1 mRNA. |
| AF071084 | Trailer GGCAGG, Position 2328 Mus musculus Nrf1 splice variant D (Nrf1) mRNA |
| CTCGTGCCTG count=2 | |
| AJ002307 | Trailer TCTCCC, Position 1164 Mus musculus mRNA for synaptogyrin 2. |
| AF151985 | Trailer TCTCCC, Position 1176 Mus musculus cellugyrin mRNA |
| CTGAAGTCTG count=2 | |
| U92794 | Trailer CAGACC, Position 1712 Mus musculus alpha glucosidase II beta subunit mRNA |
| CTGAGTGAGT count=2 | |
| AF109174 | Trailer GTGAGG, Position 1345 Mus musculus protein inhibitor of activated STAT protein-gamma |
| CTGCCTTAGG count=2 | |
| D67015 | Trailer GACTGG, Position 5286 Mouse mRNA for scg |
| CTGCTTCGAG count=2 | |
| M26391 | Trailer ATTTCT, Position 4425 Mouse retinoblastoma susceptibility protein (pp105 Rb) mRNA |
| CTGGACATCA count=2 | |
| AB033123 | Trailer CTGATA, Position 1834 Mus musculus CtBP2 mRNA for C-terminal binding protein 2 |
| CTGGAGAGCT count=2 | |
| AB041656 | Trailer CTCAGA, Position 315 Mus musculus brain cDNA |
| CTGGCGCGGG count=2 | |
| AF146224 | Trailer TAGCCA, Position 1160 Mus musculus HMG domain protein HMGX2 (Hmgx2) mRNA |
| CTGTCACTGC count=2 | |
| J04627 | Trailer AAAGCC, Position 859 Mouse NAD-dependent methylenetetrahydrofolate dehydrogenase- |
| CTGTCTCAAG count=2 | |
| AJ271893 | Trailer ATGAAC, Position 2167 Mus musculus mRNA for WD-repeat domain 4 protein (wdr4 gene) |
| CTGTGACAAA count=2 | |
| AF234179 | Trailer AAAAAA, Position 2219 Mus musculus RNA-binding protein (Tbrbp) mRNA |
| CTGTGTTACC count=2 | |
| U73200 | Trailer CGGCAA, Position 3193 Mus musculus p116Rip mRNA |
| CTTGCCTCCT count=2 | |
| AF159850 | Trailer CACTAA, Position 1515 Mus musculus phospholipid scramblase 3 mRNA |
| CTTGGTAACT count=2 | |
| AB016490 | Trailer TTGTAG, Position 955 Mus musculus mJTB mRNA |
| CTTTCCAATC count=2 | |
| D10576 | Trailer CTGGTT, Position 3308 Mus musculus mRNA for ubiquitin activating enzyme E1 |
| X62580 | Trailer CTGGTT, Position 1376 M.musculus Sbx gene. |
| CTTTGCTCTG count=2 | |
| AF151637 | Trailer AACTTG, Position 735 Mus musculus CRIPT protein mRNA |
| CTTTTGACAA count=2 | |
| M76131 | Trailer CAGCAG, Position 697 Mouse elongation factor 2 (ef-2) mRNA |
| GAAACCGCCT count=2 | |
| L26528 | Trailer TTCCTC, Position 1242 Mus musculus Rab11b mRNA |
| GAACCCAGAG count=2 | |
| X52574 | Trailer CCTCAA, Position 3417 Mouse mRNA from Mov10 locus. |
| GAGATGATTT count=2 | |
| AL357453 | Trailer TCCTTA, Position 810 Mus musculus EST from clone 555961 |
| AL357452 | Trailer TCCTTA, Position 310 Mus musculus EST from clone 657528 |
| GAGCTACGTT count=2 | |
| AB012108 | Trailer CCTACG, Position 765 Mus musculus ENDOG mRNA for endonuclease G |
| GAGCTGTGGT count=2 | |
| AF288690 | Trailer TTCAGA, Position 514 Mus musculus nucleoside diphosphate kinase D (Nm23-M4) mRNA |
| AF153451 | Trailer TTCAGA, Position 501 Mus musculus nucleoside diphosphate kinase (nm23-M4) mRNA |
| GCCTTAACTA count=2 | |
| AF140224 | Trailer CTGTAA, Position 4422 Mus musculus transcriptional repressor RP58 (rp58) mRNA |
| GCTCTGAGTT count=2 | |
| U43327 | Trailer GTACAC, Position 4923 Mus musculus laminin gamma 2 chain (B2t) mRNA |
| GCTGGCCCAG count=2 | |
| AB024984 | Trailer GGAAAC, Position 1319 Mus musculus Sid329 mRNA |
| GCTTTGATGA count=2 | |
| AB031290 | Trailer CCACAA, Position 1339 Mus musculus mRNA for C7-1 protein |
| GGAACACCAT count=2 | |
| M19438 | Trailer GGACGC, Position 130 Mouse cytosolic thymidine kinase mRNA clone pMtk9 |
| M11945 | Trailer GGACGC, Position 237 Mouse cytosolic thymidine kinase mRNA clone pMtk4 |
| GGGTCATGGA count=2 | |
| AF043070 | Trailer CTACCA, Position 1082 Mus musculus branched chain alpha ketoacid dehydrogenase kinase |
| GGGTTGGAAA count=2 | |
| U01163 | Trailer GCTAAC, Position 2227 Mus musculus 129SV carnitine palmitoyltransferase II mRNA |
| GGTCGGCTGG count=2 | |
| U34691 | Trailer TGCAGC, Position 1229 Mus musculus uroporphyrinogen decarboxylase mRNA |
| GGTCGGGTTC count=2 | |
| D89063 | Trailer TGTTTT, Position 1516 Mus musculus mRNA for oligosaccharyltransferase |
| GGTGTCACAA count=2 | |
| AB004305 | Trailer TGA , Position 4714 Mus musculus mRNA for mBLVR |
| GGTGTCAGGA count=2 | |
| AF246218 | Trailer ACTGGC, Position 2042 Mus musculus SETA binding protein 1 (Sb1) mRNA |
| GTCAGGTAAT count=2 | |
| M36033 | Trailer AAACAC, Position 3035 Mouse leukocyte common antigen-related phosphatase mRNA |
| GTCCTAGGAC count=2 | |
| Z14249 | Trailer CTGTGC, Position 1445 M.musculus mRNA for mitogen activated protein kinase (erk-1). |
| GTGAAGCACC count=2 | |
| X60672 | Trailer TGAATT, Position 3352 M.musculus mRNA for radixin. |
| GTGGCATTAG count=2 | |
| AF035644 | Trailer AGGGAA, Position 704 Mus musculus potentially prenylated protein tyrosine phosphatase |
| GTTGGCTTTA count=2 | |
| AF013486 | Trailer CAGACC, Position 622 Mus musculus type I interferon receptor soluble isoform precursor |
| GTTTGGAATT count=2 | |
| L11316 | Trailer TTCTTT, Position 3271 Mouse oncogene (ect2) mRNA |
| TAAGTCAGCT count=2 | |
| Z30970 | Trailer GTTTGG, Position 4210 M.musculus (Balb/C) TIMP-3 gene for metalloproteinase-3 tissue |
| TAAGTGTACT count=2 | |
| D50367 | Trailer AGTTAC, Position 3666 Mus musculus mRNA for KAP3B |
| D50366 | Trailer AGTTAC, Position 3600 Mus musculus mRNA for KAP3A |
| TACACGCACT count=2 | |
| M13963 | Trailer TCACAT, Position 1054 Mouse inhibitory G protein of adenylate cyclase |
| TACATGTGGG count=2 | |
| M63836 | Trailer GAAAAA, Position 2407 Mouse beta-glucoronidase (Gus-s) mRNA |
| M28541 | Trailer GAAAAA, Position 2407 Mouse beta-glucoronidase (Gus-s) mRNA |
| M28540 | Trailer GAAAAA, Position 2407 Mouse beta-glucoronidase (Gus-s) mRNA |
| M19279 | Trailer GAAAAA, Position 2406 Mouse beta-glucuronidase (Gus-s-a allele) mRNA |
| J03047 | Trailer GAAAAA, Position 2407 Mouse beta-glucuronidase mRNA |
| TACATTGATG count=2 | |
| U70662 | Trailer ACCTAA, Position 2705 Mouse epithelial zinc-finger protein EZF (Zie) mRNA |
| U20344 | Trailer ACCTAA, Position 2416 Mus musculus gut-enriched Kruppel-like factor GKLF mRNA |
| TACTAATCCT count=2 | |
| M24786 | Trailer TATATT, Position 251 Mouse anti-idotype immunoglobulin heavy chain variable |
| TAGACAGTAT count=2 | |
| M15525 | Trailer TGAAGC, Position 4726 Mouse laminin B1 mRNA |
| X05212 | Trailer TGAAGC, Position 678 Mouse mRNA for laminin B1 C-terminus. |
| TAGAGAAGAG count=2 | |
| X74351 | Trailer AGAGCC, Position 548 M.musculus mRNA for XPAC Xeroderma Pigmentosum group A Correcting |
| TAGCCTTATG count=2 | |
| X07414 | Trailer CCCGGG, Position 906 Mouse mRNA for excision repair protein ERCC-1. |
| TAGGAGTGGT count=2 | |
| AF152996 | Trailer GGACTC, Position 1632 Mus musculus peroxisomal assembly protein PEX3 mRNA |
| TAGTCTAATT count=2 | |
| Z14986 | Trailer ACAGGT, Position 2992 M.musculus mRNA encoding adenosylmethionine decarboxylase. |
| TAGTTCAGTA count=2 | |
| X71978 | Trailer CTCCAA, Position 1292 M.musculus Fif mRNA. |
| TCAAAGGAAC count=2 | |
| AB024427 | Trailer TTCTCC, Position 1770 Mus musculus mRNA for Sid1669p |
| TCAACTGACT count=2 | |
| U30840 | Trailer CCTTTT, Position 1610 Mus musculus voltage dependent anion channel 1 mRNA |
| TCACCTGTCA count=2 | |
| AF102536 | Trailer GTTGTT, Position 536 Mus musculus olfactory receptor G6 mRNA |
| TCAGCGCAAT count=2 | |
| X82786 | Trailer TACAGT, Position 9383 M.musculus mRNA for Ki-67. |
| TCATTGTCAG count=2 | |
| AF020055 | Trailer ATTTTG, Position 2413 Mus musculus Wdr1 protein mRNA |
| TCCGTCTCAT count=2 | |
| U12961 | Trailer TCTTTC, Position 1462 Mus musculus NAD(P)H:menadione oxidoreductase (Nmo1) mRNA |
| TCCTGTCTCC count=2 | |
| AF176524 | Trailer ACCCAC, Position 466 Mus musculus F-box protein FBL10 mRNA |
| TCGCTCCTTT count=2 | |
| AF159159 | Trailer GAGAGG, Position 1570 Mus musculus cyclin ania-6a mRNA |
| TCGGACGCTC count=2 | |
| D17341 | Trailer AGTGGG, Position 485 Mus musculus mRNA for male-enhanced antigen (Mea) |
| L10401 | Trailer AGTGGG, Position 530 Mus musculus male-enhanced antigen (Mea) mRNA |
| M27938 | Trailer AGTGGG, Position 530 Mouse male-enhanced antigen mRNA (Mea) |
| TCTAAGACCA count=2 | |
| AF072370 | Trailer GTCTCT, Position 4564 Mus musculus UNC51.1 serine/threonine kinase (Unc51.1) mRNA |
| TCTACTGGCA count=2 | |
| U63648 | Trailer GGCCAT, Position 3415 Mus musculus p160 myb-binding protein (P160) mRNA |
| TCTCTACTAT count=2 | |
| X78684 | Trailer GTTTCT, Position 1599 M.musculus mRNA for B-cell receptor associated protein (BAP) 29. |
| TCTCTCTTCC count=2 | |
| X51741 | Trailer TCCTGT, Position 47 M.musculus mRNA for immunoglobulin heavy chain (IgM). |
| TCTGAGTTCG count=2 | |
| M17534 | Trailer AGGCCA, Position 1367 Mouse T-cell membrane glycoprotein (Ly-3) mRNA |
| L42996 | Trailer AGGCCA, Position 2501 Mus musculus nuclear-encoded mitochondrial acyltransferase mRNA |
| TCTGTCTTTC count=2 | |
| X84014 | Trailer AGTGAC, Position 7797 M.musculus mRNA for laminin-5 |
| X84013 | Trailer AGTGAC, Position 5285 M.musculus mRNA for laminin-5 |
| TGAAACAAGG count=2 | |
| Z48043 | Trailer GGCCAT, Position 2585 M.musculus mRNA for proteinase activated receptor 2. |
| TGAAACCAAG count=2 | |
| X64713 | Trailer TATCTT, Position 1759 M.musculus mRNA for cyclin B1. |
| TGAGACAGTT count=2 | |
| U76426 | Trailer ATAGCT, Position 888 Mus musculus K-ras type B mRNA |
| U76425 | Trailer ATAGCT, Position 888 Mus musculus K-ras type A mRNA |
| TGAGGACACA count=2 | |
| M38229 | Trailer GCCCTT, Position 57 Mouse Ig heavy chain V-D region 10NL112-9 mRNA |
| M38228 | Trailer GCCCTT, Position 222 Mouse Ig heavy chain V-D region 10L15-15 mRNA |
| M38227 | Trailer GCCCTT, Position 260 Mouse Ig heavy chain V-D region 10L126-7 mRNA |
| M38226 | Trailer GCCCTT, Position 192 Mouse Ig heavy chain V-D region 10L16-5 mRNA |
| M38225 | Trailer GCCTTT, Position 222 Mouse Ig heavy chain V-D region 10N17-4 mRNA |
| D00078 | Trailer GCCACG, Position 317 Mus musculus mRNA for immunoglobulin M heavy chain V region |
| M22955 | Trailer GCCCTC, Position 260 Mouse Ig germline X24 H-chain mRNA (V-D-J1) |
| M74424 | Trailer GCCCTT, Position 260 Mouse Ig rearranged heavy chain mRNA V-J1-region |
| M74423 | Trailer GCCCTT, Position 260 Mouse Ig rearranged heavy chain mRNA V-J2-region |
| M19201 | Trailer GCCCTT, Position 260 Mouse Ig active mu chain V-region mRNA |
| M13441 | Trailer CAAGCG, Position 1229 Mouse alpha-tubulin isotype M-alpha-6 mRNA |
| X56974 | Trailer TTCTGG, Position 1979 M.musculus mRNA for external transcribed spacer (partial) B2 |
| AF076681 | Trailer GTTTTG, Position 4148 Mus musculus type-I transmembrane ER-resident serine/threonine |
| AF213392 | Trailer GAGCAG, Position 879 Mus musculus ATP-binding cassette protein (Abcb11) mRNA |
| AF133903 | Trailer GAGCAG, Position 4700 Mus musculus domesticus liver bile salt export pump (Spgp) mRNA |
| U27455 | Trailer AAAGTA, Position 1618 Mus musculus serine palmitoyltransferase LCB2 subunit mRNA |
| X95642 | Trailer AAAGTA, Position 1621 M.musculus mRNA for serine palmitoyltransferase subunit B. |
| U89772 | Trailer AAACAA, Position 1339 Mus musculus PETA-3 (CD151) mRNA |
| AF173156 | Trailer CAGATG, Position 1539 Mus musculus MPAST1 (Past1) mRNA |
| AF099186 | Trailer CAGATG, Position 1531 Mus musculus EH domain-containing protein EHD1 mRNA |
| TGGAGCCCTG count=2 | |
| AF136277 | Trailer GAATCC, Position 1325 Mus musculus cathepsin Z precursor (Ctsz) mRNA |
| TGGCACTACA count=2 | |
| AF113951 | Trailer GACAAA, Position 2096 Mus musculus cyclin T mRNA |
| AF109179 | Trailer GACAAA, Position 2096 Mus musculus cyclin T1 mRNA |
| AF095640 | Trailer GACAAA, Position 2096 Mus musculus cyclin T1 mRNA |
| AF087662 | Trailer GACAAA, Position 2096 Mus musculus cyclin T1 mRNA |
| TGGCTCCTAC count=2 | |
| U96116 | Trailer AGGCAT, Position 666 Mus musculus amyloid beta-peptide binding protein (ERAB) mRNA |
| TGGGAGCAGG count=2 | |
| AJ005790 | Trailer AGAATA, Position 1402 Mus musculus mRNA for PKL12 protein. |
| AF089869 | Trailer AGAATA, Position 1445 Mus musculus serine/threonine kinase 16 (Stk16) mRNA |
| AB022179 | Trailer AGAATA, Position 1400 Mus musculus mRNA for F5-2 |
| AB017197 | Trailer AGAATA, Position 1416 Mus musculus mRNA for EDPK |
| TGGGAGTGTA count=2 | |
| U29427 | Trailer TTTCTG, Position 259 Mus musculus anti-PC rearranged Ig kappa chain V-J region mRNA |
| U29266 | Trailer TTTCTG, Position 259 Mus musculus clone 32-6-2 anti-phosphocholine IgL antibody heavy |
| TGGGTGTTCT count=2 | |
| U77415 | Trailer GGATGT, Position 2158 Mus musculus Bop1 mRNA |
| TGTAGGCAGA count=2 | |
| AB041607 | Trailer GCTCTG, Position 2595 Mus musculus brain cDNA |
| TGTATCTTAA count=2 | |
| X89998 | Trailer TAAAAA, Position 2433 M.musculus mRNA for 17 beta-hydroxysteroid dehydrogenase type IV. |
| TGTATTATAA count=2 | |
| AF302503 | Trailer GTTATC, Position 3484 Mus musculus pellino 1 (Peli1) mRNA |
| TGTGAACATG count=2 | |
| AF155739 | Trailer TTTATT, Position 2313 Mus musculus axotrophin mRNA |
| TGTGAATAAA count=2 | |
| AF111811 | Trailer GTTTTA, Position 3964 Mus musculus proton-dependent high affinity oligopeptide |
| TGTGGCCTCA count=2 | |
| D10011 | Trailer TCATTG, Position 2742 Mus musculus mRNA for glutamate receptor channel subunit gamma 2 |
| TGTTCTATAC count=2 | |
| AB024566 | Trailer ATACTG, Position 3104 Mus musculus mRNA for heparan sulfate 6-sulfotransferase 1 |
| TGTTGGCTAC count=2 | |
| M14537 | Trailer TGAATT, Position 1919 Mouse nicotinic acetylcholine receptor beta subunit mRNA |
| TGTTGGGTAT count=2 | |
| AF107296 | Trailer AGCAGA, Position 3016 Mus musculus mitotic checkpoint protein kinase BUB1B (Bub1b) mRNA |
| TGTTTGCAAA count=2 | |
| AJ132409 | Trailer TACTAC, Position 4773 Mus musculus mRNA for LIM domains containing protein 1. |
| TGTTTGGCTG count=2 | |
| AB025582 | Trailer TGAGGT, Position 355 Mus musculus mRNA for proliferation related acidic leucine rich |
| TGTTTTGTAC count=2 | |
| U64033 | Trailer TTTTTA, Position 2637 Mus musculus Tera (Tera) mRNA |
| TTAAACCCAA count=2 | |
| U35142 | Trailer AGTATG, Position 1530 Mus musculus retinoblastoma-binding protein (mRbAp46) mRNA |
| TTAAAGCTTT count=2 | |
| X67644 | Trailer TCTCTA, Position 1262 M.musculus gly96 mRNA. |
| TTAACCATCA count=2 | |
| D29639 | Trailer CTGTCC, Position 1547 Mouse embryonal carcinoma cell mRNA for 3-hydroxyacyl CoA |
| TTATCTTATA count=2 | |
| U57413 | Trailer CTGTCC, Position 1845 Mus musculus mRNA |
| U40930 | Trailer CTGTCC, Position 1853 Mus musculus oxidative stress-induced protein mRNA |
| TTCAAAATAA count=2 | |
| U14390 | Trailer ATGTAT, Position 2973 Mus musculus aldehyde deydrogenase (Ahd3) mRNA |
| TTCAAAGAGC count=2 | |
| X95397 | Trailer ATCTCC, Position 312 M.musculus mRNA for M31 protein |
| TTCAGCTCTC count=2 | |
| AF155546 | Trailer AGAAGA, Position 772 Mus musculus hypothetical protein mRNA |
| TTCAGGCTTT count=2 | |
| AJ223069 | Trailer TTT , Position 1933 Mus musculus mRNA for TCF-3 protein. |
| AJ223233 | Trailer TTTAAA, Position 1848 Mus musculus mRNA for TCF-3 protein |
| AF057691 | Trailer TTTAAA, Position 1413 Mus musculus HMG box transcription factor (TCF-3) mRNA |
| TTCAGTGAAC count=2 | |
| AJ238540 | Trailer CTTTGA, Position 5314 Mus musculus mRNA for hexokinase II. |
| TTCCCACACT count=2 | |
| U27177 | Trailer GGAGGT, Position 4286 Mus musculus p107 (p107) mRNA |
| TTCCCCTGAT count=2 | |
| M13019 | Trailer GGCACT, Position 575 Mouse thymidylate synthase mRNA |
| M30774 | Trailer GGCACT, Position 704 Mouse thymidylate synthase pseudogene mRNA |
| TTCGTAGTGG count=2 | |
| D87898 | Trailer ACAGCA, Position 342 Mus musculus mRNA for ARF1 |
| TTCTAATGAT count=2 | |
| AF216186 | Trailer GTATTG, Position 6533 Mus musculus PPAR interacting protein PRIP (Prip) mRNA |
| TTCTCTTGTC count=2 | |
| U73029 | Trailer ATATTC, Position 3548 Mus musculus interferon regulatory factor 6 (mirf6) mRNA |
| TTCTGCTTGT count=2 | |
| L17306 | Trailer CAGTGG, Position 361 Mouse peripheral-type benzodiazepine receptor mRNA |
| TTCTTGCTAG count=2 | |
| AF027963 | Trailer TGTAGC, Position 1734 Mus musculus X box binding protein-1 (Xbp1) mRNA |
| TTCTTTAACT count=2 | |
| AJ297526 | Trailer CATTTA, Position 3373 Mus musculus mRNA for Sac1p protein. |
| TTGAAAGTGA count=2 | |
| D12513 | Trailer TGTTAA, Position 4175 Mouse mRNA for DNA topoisomerase II |
| TTGCCCAATT count=2 | |
| AF190796 | Trailer ACCACC, Position 519 Mus musculus dynactin subunit p27 (p27) mRNA |
| AF124788 | Trailer ACCACC, Position 509 Mus musculus WS-3 protein mRNA |
| TTGGCTTCCT count=2 | |
| X60203 | Trailer GGCTTT, Position 1367 M.musculus mRNA for FK506-binding protein. |
| TTGGCTTGTA count=2 | |
| U60473 | Trailer GGCGAG, Position 1014 Mus musculus complement inhibitory protein CD59 mRNA |
| TTGGTCACAG count=2 | |
| AB035383 | Trailer , Position 1169 Mus musculus mRNA for SRp25 nuclear protein |
| TTGTAGAAAT count=2 | |
| L04289 | Trailer GAAAAT, Position 6987 Mus musculus cyclophilin-related protein mRNA |
| TTGTTTATAC count=2 | |
| AB012725 | Trailer TAGCTT, Position 2543 Mus musculus ZAN75 mRNA for zinc finger protein |
| TTGTTTCTCT count=2 | |
| AF076623 | Trailer CTTCCT, Position 5919 Mus musculus intermediate filament protein nestin (Nes) mRNA |
| TTTAATAAAT count=2 | |
| AF035939 | Trailer GCGATA, Position 593 Mus musculus Magoh mRNA |
| TTTATGAAAT count=2 | |
| D85926 | Trailer TCTTAA, Position 645 Mus musculus mRNA for Sh3yl1 |
| TTTCCATATC count=2 | |
| AF030559 | Trailer AAGCGA, Position 1640 Mus musculus ATP synthase beta-subunit (beta-F1 ATPase) mRNA |
| TTTCCTCCAA count=2 | |
| AB020983 | Trailer TAAAAC, Position 2373 Mus musculus Ash2l mRNA |
| TTTGAATGTG count=2 | |
| AF013490 | Trailer TATATT, Position 3360 Mus musculus protein-tyrosine phosphatase mRNA |
| TTTGAGCCCA count=2 | |
| AF188613 | Trailer CTCGTC, Position 1261 Mus musculus channel activating protease 1 mRNA |
| TTTGGCAGAT count=2 | |
| X80169 | Trailer AAAGTT, Position 5680 M.musculus mRNA for 200 kD protein. |
| TTTGGTGAAG count=2 | |
| Y17852 | Trailer TGGCCA, Position 116 Mus musculus mRNA for ganglioside-induced differentiation |
| TTTTCATCAA count=2 | |
| D45836 | Trailer GGCGCC, Position 3590 Mouse mRNA for nuclear pore-targeting complex component of 97kDa |
| TTTTTAGATA count=2 | |
| AB041882 | Trailer TTCTTG, Position 1373 Mus musculus mRNA for TOPK |
| TTTTTAGCAC count=2 | |
| L29468 | Trailer TAAGGA, Position 2353 Mouse cofilin isoform mRNA |